Merge branch 'master' into faster-diffs

# Conflicts:
#	app/helpers/notes_helper.rb
#	app/views/projects/diffs/_line.html.haml
#	app/views/projects/diffs/_parallel_view.html.haml
#	app/views/projects/diffs/_text_file.html.haml
#	features/steps/shared/diff_note.rb

205 files changed, 5936 insertions, 1135 deletions

diff --git a/CHANGELOG b/CHANGELOG
index 16f181b68a1..757bb3f1670 100644
--- a/CHANGELOG
+++ b/CHANGELOG
@@ -8,6 +8,7 @@ v 8.10.0 (unreleased)
   - Wrap code blocks on Activies and Todos page. !4783 (winniehell)
   - Align flash messages with left side of page content !4959 (winniehell)
   - Display last commit of deleted branch in push events !4699 (winniehell)
+  - Escape file extension when parsing search results !5141 (winniehell)
   - Apply the trusted_proxies config to the rack request object for use with rack_attack
   - Add Sidekiq queue duration to transaction metrics.
   - Add a new column `artifacts_size` to table `ci_builds` !4964
@@ -15,10 +16,13 @@ v 8.10.0 (unreleased)
   - Make images fit to the size of the viewport !4810
   - Fix check for New Branch button on Issue page !4630 (winniehell)
   - Fix MR-auto-close text added to description. !4836
+  - Fix issue, preventing users w/o push access to sort tags !5105 (redetection)
   - Add Spring EmojiOne updates.
+  - Fix viewing notification settings when a project is pending deletion
   - Fix pagination when sorting by columns with lots of ties (like priority)
   - Updated project header design
   - Exclude email check from the standard health check
+  - Updated layout for Projects, Groups, Users on Admin area !4424
   - Fix changing issue state columns in milestone view
   - Add notification settings dropdown for groups
   - Allow importing from Github using Personal Access Tokens. (Eric K Idema)
@@ -28,7 +32,9 @@ v 8.10.0 (unreleased)
   - Reduce size of HTML used by diff comment forms
   - Fix user creation with stronger minimum password requirements !4054 (nathan-pmt)
   - PipelinesFinder uses git cache data
+  - Throttle the update of `project.pushes_since_gc` to 1 minute.
   - Check for conflicts with existing Project's wiki path when creating a new project.
+  - Show last push widget in upstream after push to fork
   - Don't instantiate a git tree on Projects show default view
   - Bump Rinku to 2.0.0
   - Remove unused front-end variable -> default_issues_tracker
@@ -39,20 +45,30 @@ v 8.10.0 (unreleased)
   - Metrics for Rouge::Plugins::Redcarpet and Rouge::Formatters::HTMLGitlab
   - RailsCache metris now includes fetch_hit/fetch_miss and read_hit/read_miss info.
   - Allow [ci skip] to be in any case and allow [skip ci]. !4785 (simon_w)
+  - Set import_url validation to be more strict
   - Add basic system information like memory and disk usage to the admin panel
   - Don't garbage collect commits that have related DB records like comments
   - More descriptive message for git hooks and file locks
   - Handle custom Git hook result in GitLab UI
-
-v 8.9.5 (unreleased)
+  - Allow '?', or '&' for label names
+  - Fix importer for GitHub Pull Requests when a branch was reused across Pull Requests
+  - Add date when user joined the team on the member page
+  - Fix 404 redirect after validation fails importing a GitLab project
+
+v 8.9.5
+  - Add more debug info to import/export and memory killer. !5108
+  - Fixed avatar alignment in new MR view. !5095
+  - Fix diff comments not showing up in activity feed. !5069
+  - Add index on both Award Emoji user and name. !5061
+  - Downgrade to Redis 3.2.2 due to massive memory leak with Sidekiq. !5056
+  - Re-enable import button when import process fails due to namespace already being taken. !5053
+  - Fix snippets comments not displayed. !5045
+  - Fix emoji paths in relative root configurations. !5027
+  - Fix issues importing events in Import/Export. !4987
+  - Fixed 'use shortcuts' button on docs. !4979
+  - Admin should be able to turn shared runners into specific ones. !4961
+  - Update RedCloth to 4.3.2 for CVE-2012-6684. !4929 (Takuya Noguchi)
   - Improve the request / withdraw access button. !4860
-  - Fix assigning shared runners as admins. !4961
-  - Show "locked" label for locked runners on runners admin. !4961
-  - Downgrade to Redis 3.2.2 due to massive memory leak with Sidekiq
-  - Add index on the user and emoji name on AwardEmoji table !5061
-  - Fixes issues importing events in Import/Export. Import/Export version bumped to 0.1.1
-  - Fix import button disabled when import process fail due to the namespace already been taken.
-  - Security: Update RedCloth to 4.3.2 (Takuya Noguchi)
 
 v 8.9.4
   - Fix privilege escalation issue with OAuth external users.
diff --git a/GITLAB_SHELL_VERSION b/GITLAB_SHELL_VERSION
index fd2a01863fd..944880fa15e 100644
--- a/GITLAB_SHELL_VERSION
+++ b/GITLAB_SHELL_VERSION
@@ -1 +1 @@
-3.1.0
+3.2.0
diff --git a/app/assets/javascripts/ci/build.coffee b/app/assets/javascripts/ci/build.coffee
index 2d515d7efa2..74691b2c1b5 100644
--- a/app/assets/javascripts/ci/build.coffee
+++ b/app/assets/javascripts/ci/build.coffee
@@ -2,7 +2,7 @@ class @CiBuild
   @interval: null
   @state: null
 
-  constructor: (@build_url, @build_status, @state) ->
+  constructor: (@page_url, @build_url, @build_status, @state) ->
     clearInterval(CiBuild.interval)
 
     # Init breakpoint checker
@@ -41,7 +41,7 @@ class @CiBuild
       # Only valid for runnig build when output changes during time
       #
       CiBuild.interval = setInterval =>
-        if window.location.href.split("#").first() is @build_url
+        if window.location.href.split("#").first() is @page_url
           @getBuildTrace()
       , 4000
 
@@ -57,7 +57,7 @@ class @CiBuild
 
   getBuildTrace: ->
     $.ajax
-      url: "#{@build_url}/trace.json?state=#{encodeURIComponent(@state)}"
+      url: "#{@page_url}/trace.json?state=#{encodeURIComponent(@state)}"
       dataType: "json"
       success: (log) =>
         if log.state
@@ -70,7 +70,7 @@ class @CiBuild
             $('.js-build-output').html log.html
           @checkAutoscroll()
         else if log.status isnt @build_status
-          Turbolinks.visit @build_url
+          Turbolinks.visit @page_url
 
   checkAutoscroll: ->
     $("html,body").scrollTop $("#build-trace").height()  if "enabled" is $("#autoscroll-button").data("state")
diff --git a/app/assets/javascripts/dispatcher.js.coffee b/app/assets/javascripts/dispatcher.js.coffee
index 9493a575801..a39df421832 100644
--- a/app/assets/javascripts/dispatcher.js.coffee
+++ b/app/assets/javascripts/dispatcher.js.coffee
@@ -127,7 +127,7 @@ class Dispatcher
           when 'groups'
             new UsersSelect()
           when 'projects'
-            new NamespaceSelect()
+            new NamespaceSelects()
       when 'dashboard', 'root'
         shortcut_handler = new ShortcutsDashboardNavigation()
       when 'profiles'
diff --git a/app/assets/javascripts/files_comment_button.js.coffee b/app/assets/javascripts/files_comment_button.js.coffee
index 171778e5347..595a09e4146 100644
--- a/app/assets/javascripts/files_comment_button.js.coffee
+++ b/app/assets/javascripts/files_comment_button.js.coffee
@@ -6,7 +6,6 @@ class @FilesCommentButton
     @COMMENT_BUTTON_CLASS = '.add-diff-note'
     @COMMENT_BUTTON_TEMPLATE = _.template '<button name="button" type="submit" class="btn <%- COMMENT_BUTTON_CLASS %> js-add-diff-note-button" title="Add a comment to this line"><i class="fa fa-comment-o"></i></button>'
 
-    @LINE_HOLDER_CLASS = '.line_holder'
     @LINE_NUMBER_CLASS = 'diff-line-num'
     @LINE_CONTENT_CLASS = 'line_content'
     @UNFOLDABLE_LINE_CLASS = 'js-unfold'
@@ -33,20 +32,20 @@ class @FilesCommentButton
   render: (e) ->
     currentTarget = $(e.currentTarget)
     textFileElement = @getTextFileElement(currentTarget)
-    lineHolderElement = @getLineHolder(currentTarget)
     lineContentElement = @getLineContent(currentTarget)
     buttonParentElement = @getButtonParent(currentTarget)
 
     return unless @shouldRender e, buttonParentElement
 
     buttonParentElement.append @buildButton
+      noteable_type: textFileElement.attr 'data-noteable-type'
+      noteable_id: textFileElement.attr 'data-noteable-id'
       commit_id: textFileElement.attr 'data-commit-id'
-      discussion_id: lineContentElement.attr('data-discussion-id') or lineHolderElement.attr('data-discussion-id')
-      line_code: lineContentElement.attr('data-line-code') or lineHolderElement.attr('id')
+      note_type: lineContentElement.attr 'data-note-type'
+      position: lineContentElement.attr 'data-position'
       line_type: lineContentElement.attr 'data-line-type'
-      note_type: textFileElement.attr 'data-note-type'
-      noteable_id: textFileElement.attr 'data-noteable-id'
-      noteable_type: textFileElement.attr 'data-noteable-type'
+      discussion_id: lineContentElement.attr 'data-discussion-id'
+      line_code: lineContentElement.attr 'data-line-code'
     return
 
   destroy: (e) =>
@@ -58,21 +57,18 @@ class @FilesCommentButton
     initializedButtonTemplate = @COMMENT_BUTTON_TEMPLATE
       COMMENT_BUTTON_CLASS: @COMMENT_BUTTON_CLASS.substr 1
     $(initializedButtonTemplate).attr
+      'data-noteable-type': buttonAttributes.noteable_type
       'data-noteable-id': buttonAttributes.noteable_id
       'data-commit-id': buttonAttributes.commit_id
-      'data-discussion-id': buttonAttributes.discussion_id
-      'data-noteable-type': buttonAttributes.noteable_type
-      'data-line-type': buttonAttributes.line_type
       'data-note-type': buttonAttributes.note_type
       'data-line-code': buttonAttributes.line_code
+      'data-position': buttonAttributes.position
+      'data-discussion-id': buttonAttributes.discussion_id
+      'data-line-type': buttonAttributes.line_type
 
   getTextFileElement: (hoveredElement) ->
     $(hoveredElement.closest(@TEXT_FILE_SELECTOR))
 
-  getLineHolder: (hoveredElement) ->
-    return hoveredElement if hoveredElement.hasClass @LINE_HOLDER_CLASS
-    $(hoveredElement.parent())
-
   getLineContent: (hoveredElement) ->
     return hoveredElement if hoveredElement.hasClass @LINE_CONTENT_CLASS
 
diff --git a/app/assets/javascripts/gfm_auto_complete.js.coffee b/app/assets/javascripts/gfm_auto_complete.js.coffee
index b7d040bae85..4a851d9c9fb 100644
--- a/app/assets/javascripts/gfm_auto_complete.js.coffee
+++ b/app/assets/javascripts/gfm_auto_complete.js.coffee
@@ -190,7 +190,7 @@ GitLab.GfmAutoComplete =
       callbacks:
         beforeSave: (merges) ->
           sanitizeLabelTitle = (title)->
-            if /\w+\s+\w+/g.test(title)
+            if /[\w\?&]+\s+[\w\?&]+/g.test(title)
               "\"#{sanitize(title)}\""
             else
               sanitize(title)
diff --git a/app/assets/javascripts/labels_select.js.coffee b/app/assets/javascripts/labels_select.js.coffee
index ce859fedb2d..7688609b301 100644
--- a/app/assets/javascripts/labels_select.js.coffee
+++ b/app/assets/javascripts/labels_select.js.coffee
@@ -32,7 +32,7 @@ class @LabelsSelect
       if issueUpdateURL
         labelHTMLTemplate = _.template(
             '<% _.each(labels, function(label){ %>
-            <a href="<%- ["",issueURLSplit[1], issueURLSplit[2],""].join("/") %>issues?label_name[]=<%- label.title %>">
+            <a href="<%- ["",issueURLSplit[1], issueURLSplit[2],""].join("/") %>issues?label_name[]=<%- encodeURIComponent(label.title) %>">
             <span class="label has-tooltip color-label" title="<%- label.description %>" style="background-color: <%- label.color %>; color: <%- label.text_color %>;">
             <%- label.title %>
             </span>
@@ -261,7 +261,7 @@ class @LabelsSelect
             $a.attr('data-label-id', label.id)
 
           $a.addClass(selectedClass.join(' '))
-            .html("#{colorEl} #{_.escape(label.title)}")
+            .html("#{colorEl} #{label.title}")
 
           # Return generated html
           $li.html($a).prop('outerHTML')
@@ -288,7 +288,7 @@ class @LabelsSelect
         fieldName: $dropdown.data('field-name')
         id: (label) ->
           if $dropdown.hasClass("js-filter-submit") and not label.isAny?
-            _.escape label.title
+            label.title
           else
             label.id
 
diff --git a/app/assets/javascripts/namespace_select.js.coffee b/app/assets/javascripts/namespace_select.js.coffee
index a02c4515ccc..3b419dff105 100644
--- a/app/assets/javascripts/namespace_select.js.coffee
+++ b/app/assets/javascripts/namespace_select.js.coffee
@@ -1,25 +1,56 @@
 class @NamespaceSelect
-  constructor: ->
-    namespaceFormatResult = (namespace) ->
-      markup = "<div class='namespace-result'>"
-      markup += "<span class='namespace-kind'>" + namespace.kind + "</span>"
-      markup += "<span class='namespace-path'>" + namespace.path + "</span>"
-      markup += "</div>"
-      markup
-
-    formatSelection = (namespace) ->
-      namespace.kind + ": " + namespace.path
-
-    $('.ajax-namespace-select').each (i, select) ->
-      $(select).select2
-        placeholder: "Search for namespace"
-        multiple: $(select).hasClass('multiselect')
-        minimumInputLength: 0
-        query: (query) ->
-          Api.namespaces query.term, (namespaces) ->
-            data = { results: namespaces }
-            query.callback(data)
-
-        dropdownCssClass: "ajax-namespace-dropdown"
-        formatResult: namespaceFormatResult
-        formatSelection: formatSelection
+  constructor: (opts) ->
+    {
+      @dropdown
+    } = opts
+
+    showAny = true
+    fieldName = 'namespace_id'
+
+    if @dropdown.attr 'data-field-name'
+     fieldName = @dropdown.data 'fieldName'
+
+    if @dropdown.attr 'data-show-any'
+      showAny = @dropdown.data 'showAny'
+
+    @dropdown.glDropdown(
+      filterable: true
+      selectable: true
+      filterRemote: true
+      search:
+        fields: ['path']
+      fieldName: fieldName
+      toggleLabel: (selected) ->
+        return if not selected.id? then selected.text else "#{selected.kind}: #{selected.path}"
+      data: (term, dataCallback) ->
+        Api.namespaces term, (namespaces) ->
+          if showAny
+            anyNamespace =
+              text: 'Any namespace'
+              id: null
+
+            namespaces.unshift(anyNamespace)
+            namespaces.splice 1, 0, 'divider'
+
+          dataCallback(namespaces)
+      text: (namespace) ->
+        return if not namespace.id? then namespace.text else "#{namespace.kind}: #{namespace.path}"
+      renderRow: @renderRow
+      clicked: @onSelectItem
+    )
+
+  onSelectItem: (item, el, e) =>
+    e.preventDefault()
+
+class @NamespaceSelects
+  constructor: (opts = {}) ->
+    {
+      @$dropdowns = $('.js-namespace-select')
+    } = opts
+
+    @$dropdowns.each (i, dropdown) ->
+      $dropdown = $(dropdown)
+
+      new NamespaceSelect(
+        dropdown: $dropdown
+      )
diff --git a/app/assets/javascripts/notes.js.coffee b/app/assets/javascripts/notes.js.coffee
index 17f7e180127..0b7d8f64456 100644
--- a/app/assets/javascripts/notes.js.coffee
+++ b/app/assets/javascripts/notes.js.coffee
@@ -100,13 +100,40 @@ class @Notes
     $('.note .js-task-list-container').taskList('disable')
     $(document).off 'tasklist:changed', '.note .js-task-list-container'
 
-  keydownNoteText: (e) ->
-    $this = $(this)
-    if $this.val() is '' and e.which is 38 and not isMetaKey e
-      myLastNote = $("li.note[data-author-id='#{gon.current_user_id}'][data-editable]:last")
-      if myLastNote.length
-        myLastNoteEditBtn = myLastNote.find('.js-note-edit')
-        myLastNoteEditBtn.trigger('click', [true, myLastNote])
+  keydownNoteText: (e) =>
+    return if isMetaKey e
+
+    $textarea = $(e.target)
+
+    # Edit previous note when UP arrow is hit
+    switch e.which
+      when 38
+        return unless $textarea.val() is ''
+
+        myLastNote = $("li.note[data-author-id='#{gon.current_user_id}'][data-editable]:last")
+        if myLastNote.length
+          myLastNoteEditBtn = myLastNote.find('.js-note-edit')
+          myLastNoteEditBtn.trigger('click', [true, myLastNote])
+
+      # Cancel creating diff note or editing any note when ESCAPE is hit
+      when 27
+        discussionNoteForm = $textarea.closest('.js-discussion-note-form')
+        if discussionNoteForm.length
+          if $textarea.val() isnt ''
+            return unless confirm('Are you sure you want to cancel creating this comment?')
+
+          @removeDiscussionNoteForm(discussionNoteForm)
+          return
+
+        editNote = $textarea.closest('.note')
+        if editNote.length
+          originalText = $textarea.closest('form').data('original-note')
+          newText = $textarea.val()
+          if originalText isnt newText
+            return unless confirm('Are you sure you want to cancel editing this comment?')
+
+          @removeNoteEditForm(editNote)
+
 
   isMetaKey = (e) ->
     (e.metaKey or e.ctrlKey or e.altKey or e.shiftKey)
@@ -213,12 +240,16 @@ class @Notes
 
     @note_ids.push(note.id)
     form = $("#new-discussion-note-form-#{note.discussion_id}")
+    if note.original_discussion_id? and form.length is 0
+      form = $("#new-discussion-note-form-#{note.original_discussion_id}")
     row = form.closest("tr")
     note_html = $(note.html)
     note_html.syntaxHighlight()
 
     # is this the first note of discussion?
     discussionContainer = $(".notes[data-discussion-id='" + note.discussion_id + "']")
+    if note.original_discussion_id? and discussionContainer.length is 0
+      discussionContainer = $(".notes[data-discussion-id='" + note.original_discussion_id + "']")
     if discussionContainer.length is 0
       # insert the note and the reply button after the temp row
       row.after note.discussion_html
@@ -291,6 +322,7 @@ class @Notes
     form.addClass "js-main-target-form"
 
     form.find("#note_line_code").remove()
+    form.find("#note_position").remove()
     form.find("#note_type").remove()
 
   ###
@@ -308,10 +340,12 @@ class @Notes
 
     new Autosave textarea, [
       "Note"
-      form.find("#note_commit_id").val()
-      form.find("#note_line_code").val()
       form.find("#note_noteable_type").val()
       form.find("#note_noteable_id").val()
+      form.find("#note_commit_id").val()
+      form.find("#note_type").val()
+      form.find("#note_line_code").val()
+      form.find("#note_position").val()
     ]
 
   ###
@@ -401,9 +435,12 @@ class @Notes
 
   Hides edit form and restores the original note text to the editor textarea.
   ###
-  cancelEdit: (e) ->
+  cancelEdit: (e) =>
     e.preventDefault()
-    note = $(this).closest(".note")
+    note = $(e.target).closest('.note')
+    @removeNoteEditForm(note)
+
+  removeNoteEditForm: (note) ->
     form = note.find(".current-note-edit-form")
     note.removeClass "is-editting"
     form.removeClass("current-note-edit-form")
@@ -482,10 +519,12 @@ class @Notes
   setupDiscussionNoteForm: (dataHolder, form) =>
     # setup note target
     form.attr 'id', "new-discussion-note-form-#{dataHolder.data("discussionId")}"
+    form.attr "data-line-code", dataHolder.data("lineCode")
     form.find("#note_type").val dataHolder.data("noteType")
     form.find("#line_type").val dataHolder.data("lineType")
     form.find("#note_commit_id").val dataHolder.data("commitId")
     form.find("#note_line_code").val dataHolder.data("lineCode")
+    form.find("#note_position").val dataHolder.attr("data-position")
     form.find("#note_noteable_type").val dataHolder.data("noteableType")
     form.find("#note_noteable_id").val dataHolder.data("noteableId")
     form.find('.js-note-discard')
diff --git a/app/assets/stylesheets/framework/dropdowns.scss b/app/assets/stylesheets/framework/dropdowns.scss
index 2a90a1fef37..d4e900f80ef 100644
--- a/app/assets/stylesheets/framework/dropdowns.scss
+++ b/app/assets/stylesheets/framework/dropdowns.scss
@@ -23,6 +23,9 @@
   .dropdown-menu,
   .dropdown-menu-nav {
     display: block;
+    @media (max-width: $screen-xs-max) {
+      width: 100%;
+    }
   }
 
   .dropdown-menu-toggle {
@@ -65,6 +68,10 @@
       color: $dropdown-toggle-hover-icon-color;
     }
   }
+
+  &.large {
+    width: 200px;
+  }
 }
 
 .dropdown-menu,
diff --git a/app/assets/stylesheets/framework/files.scss b/app/assets/stylesheets/framework/files.scss
index 71a9f79be3e..71e4b50f2af 100644
--- a/app/assets/stylesheets/framework/files.scss
+++ b/app/assets/stylesheets/framework/files.scss
@@ -50,7 +50,7 @@
     }
 
     a:not(.btn) {
-      color: $gl-dark-link-color;
+      color: $gl-text-color;
     }
 
     .left-options {
diff --git a/app/assets/stylesheets/framework/lists.scss b/app/assets/stylesheets/framework/lists.scss
index a12c0bba44a..aed0b44d91b 100644
--- a/app/assets/stylesheets/framework/lists.scss
+++ b/app/assets/stylesheets/framework/lists.scss
@@ -137,6 +137,15 @@ ul.content-list {
       padding-top: 1px;
       float: right;
 
+      > .control-text {
+        margin-right: $gl-padding-top;
+        line-height: 40px;
+
+        &:last-child {
+          margin-right: 0;
+        }
+      }
+
       > .btn,
       > .btn-group {
         margin-right: $gl-padding-top;
diff --git a/app/assets/stylesheets/framework/nav.scss b/app/assets/stylesheets/framework/nav.scss
index 6e5f216c894..02ea98e9d94 100644
--- a/app/assets/stylesheets/framework/nav.scss
+++ b/app/assets/stylesheets/framework/nav.scss
@@ -134,6 +134,11 @@
     margin-bottom: 0;
     border-bottom: none;
 
+    &.wide {
+      width: 100%;
+      display: block;
+    }
+
     li a {
       padding: 16px 10px 11px;
     }
@@ -164,6 +169,7 @@
     > .btn {
       margin-right: $gl-padding-top;
       display: inline-block;
+      vertical-align: top;
 
       &:last-child {
         margin-right: 0;
diff --git a/app/assets/stylesheets/pages/admin.scss b/app/assets/stylesheets/pages/admin.scss
index e05f14e7496..1d34a7f79ae 100644
--- a/app/assets/stylesheets/pages/admin.scss
+++ b/app/assets/stylesheets/pages/admin.scss
@@ -71,3 +71,36 @@
   @extend .broadcast-message;
   margin-bottom: 20px;
 }
+
+
+// Users List
+
+.users-list {
+  .user-row {
+    display: -webkit-flex;
+    display: -ms-flexbox;
+    display: flex;
+  }
+
+  .user-details {
+    flex: 1 1 auto;
+  }
+
+  .user-name {
+    display: inline-block;
+    font-weight: bold;
+  }
+
+  .controls {
+    > .btn, > .dropdown {
+      margin-left: 5px;
+    }
+  }
+
+  .dropdown {
+    .btn-block {
+      margin-bottom: 0;
+      line-height: inherit;
+    }
+  }
+}
diff --git a/app/assets/stylesheets/pages/diff.scss b/app/assets/stylesheets/pages/diff.scss
index 5286b73cc50..21b1c223c88 100644
--- a/app/assets/stylesheets/pages/diff.scss
+++ b/app/assets/stylesheets/pages/diff.scss
@@ -434,13 +434,3 @@
     }
   }
 }
-
-.discussion {
-  .diff-content {
-    .diff-line-num {
-      &:before {
-        content: attr(data-linenumber);
-      }
-    }
-  }
-}
diff --git a/app/assets/stylesheets/pages/groups.scss b/app/assets/stylesheets/pages/groups.scss
index 3d79f4400e2..701b9388454 100644
--- a/app/assets/stylesheets/pages/groups.scss
+++ b/app/assets/stylesheets/pages/groups.scss
@@ -38,6 +38,39 @@
       margin-right: 15px;
     }
   }
+
+  &.group-admin {
+    display: -webkit-flex;
+    display: -ms-flexbox;
+    display: flex;
+
+    .group-avatar, .group-details, .group-controls {
+      display: -webkit-flex;
+      display: -ms-flexbox;
+      display: flex;
+    }
+
+    .group-details {
+      flex: 1 1 auto;
+      flex-direction: column;
+      min-width: 0;
+    }
+
+    .group-controls {
+      align-items: center;
+
+      a {
+        margin-left: 5px;
+      }
+    }
+  }
+
+}
+
+.ldap-group-links {
+  .form-actions {
+    margin-bottom: $gl-padding;
+  }
 }
 
 .groups-cover-block {
diff --git a/app/assets/stylesheets/pages/projects.scss b/app/assets/stylesheets/pages/projects.scss
index 3325b586496..bce4aac3334 100644
--- a/app/assets/stylesheets/pages/projects.scss
+++ b/app/assets/stylesheets/pages/projects.scss
@@ -475,10 +475,6 @@ pre.light-well {
       a:hover {
         text-decoration: none;
       }
-
-      > span {
-        margin-left: 10px;
-      }
     }
   }
 
diff --git a/app/assets/stylesheets/pages/search.scss b/app/assets/stylesheets/pages/search.scss
index ae524cd6bae..9e9b18fdbb8 100644
--- a/app/assets/stylesheets/pages/search.scss
+++ b/app/assets/stylesheets/pages/search.scss
@@ -208,7 +208,7 @@
     margin-top: 5px;
 
     @media (min-width: $screen-sm-min) {
-      width: 160px;
+      width: 180px;
       margin-top: 0;
     }
   }
diff --git a/app/controllers/admin/projects_controller.rb b/app/controllers/admin/projects_controller.rb
index 4c9c6362ffc..0d2f4f6eb38 100644
--- a/app/controllers/admin/projects_controller.rb
+++ b/app/controllers/admin/projects_controller.rb
@@ -5,11 +5,12 @@ class Admin::ProjectsController < Admin::ApplicationController
   def index
     @projects = Project.all
     @projects = @projects.in_namespace(params[:namespace_id]) if params[:namespace_id].present?
-    @projects = @projects.where("projects.visibility_level IN (?)", params[:visibility_levels]) if params[:visibility_levels].present?
+    @projects = @projects.where(visibility_level: params[:visibility_level]) if params[:visibility_level].present?
     @projects = @projects.with_push if params[:with_push].present?
     @projects = @projects.abandoned if params[:abandoned].present?
     @projects = @projects.where(last_repository_check_failed: true) if params[:last_repository_check_failed].present?
-    @projects = @projects.non_archived unless params[:with_archived].present?
+    @projects = @projects.non_archived unless params[:archived].present?
+    @projects = @projects.personal(current_user) if params[:personal].present?
     @projects = @projects.search(params[:name]) if params[:name].present?
     @projects = @projects.sort(@sort = params[:sort])
     @projects = @projects.includes(:namespace).order("namespaces.path, projects.name ASC").page(params[:page])
diff --git a/app/controllers/import/gitlab_projects_controller.rb b/app/controllers/import/gitlab_projects_controller.rb
index 513348c39af..30df1fb2fec 100644
--- a/app/controllers/import/gitlab_projects_controller.rb
+++ b/app/controllers/import/gitlab_projects_controller.rb
@@ -27,10 +27,7 @@ class Import::GitlabProjectsController < Import::BaseController
         notice: "Project '#{@project.name}' is being imported."
       )
     else
-      redirect_to(
-        new_import_gitlab_project_path,
-        alert: "Project could not be imported: #{@project.errors.full_messages.join(', ')}"
-      )
+      redirect_back_or_default(options: { alert: "Project could not be imported: #{@project.errors.full_messages.join(', ')}" })
     end
   end
 
diff --git a/app/controllers/projects/blob_controller.rb b/app/controllers/projects/blob_controller.rb
index 7599fec3cdf..5356fdf010d 100644
--- a/app/controllers/projects/blob_controller.rb
+++ b/app/controllers/projects/blob_controller.rb
@@ -57,7 +57,7 @@ class Projects::BlobController < Projects::ApplicationController
     diffy = Diffy::Diff.new(@blob.data, @content, diff: '-U 3', include_diff_info: true)
     diff_lines = diffy.diff.scan(/.*\n/)[2..-1]
     diff_lines = Gitlab::Diff::Parser.new.parse(diff_lines)
-    @diff_lines = Gitlab::Diff::Highlight.new(diff_lines).highlight
+    @diff_lines = Gitlab::Diff::Highlight.new(diff_lines, repository: @repository).highlight
 
     render layout: false
   end
diff --git a/app/controllers/projects/commit_controller.rb b/app/controllers/projects/commit_controller.rb
index d162a5a3165..37d6521026c 100644
--- a/app/controllers/projects/commit_controller.rb
+++ b/app/controllers/projects/commit_controller.rb
@@ -121,7 +121,6 @@ class Projects::CommitController < Projects::ApplicationController
     opts[:ignore_whitespace_change] = true if params[:format] == 'diff'
 
     @diffs = commit.diffs(opts)
-    @diff_refs = [commit.parent || commit, commit]
     @notes_count = commit.notes.count
 
     @statuses = CommitStatus.where(pipeline: pipelines)
diff --git a/app/controllers/projects/compare_controller.rb b/app/controllers/projects/compare_controller.rb
index af0b69a2442..d240b9fe989 100644
--- a/app/controllers/projects/compare_controller.rb
+++ b/app/controllers/projects/compare_controller.rb
@@ -14,14 +14,22 @@ class Projects::CompareController < Projects::ApplicationController
 
   def show
     compare = CompareService.new.
-      execute(@project, @head_ref, @project, @base_ref, diff_options)
+      execute(@project, @head_ref, @project, @start_ref, diff_options)
 
     if compare
       @commits = Commit.decorate(compare.commits, @project)
+
+      @start_commit = @project.commit(@start_ref)
       @commit = @project.commit(@head_ref)
-      @base_commit = @project.merge_base_commit(@base_ref, @head_ref)
+      @base_commit = @project.merge_base_commit(@start_ref, @head_ref)
+
       @diffs = compare.diffs(diff_options)
-      @diff_refs = [@base_commit, @commit]
+      @diff_refs = Gitlab::Diff::DiffRefs.new(
+        base_sha: @base_commit.try(:sha),
+        start_sha: @start_commit.try(:sha),
+        head_sha: @commit.try(:sha)
+      )
+
       @diff_notes_disabled = true
       @grouped_diff_notes = {}
     end
@@ -35,12 +43,12 @@ class Projects::CompareController < Projects::ApplicationController
   private
 
   def assign_ref_vars
-    @base_ref = Addressable::URI.unescape(params[:from])
+    @start_ref = Addressable::URI.unescape(params[:from])
     @ref = @head_ref = Addressable::URI.unescape(params[:to])
   end
 
   def merge_request
     @merge_request ||= @project.merge_requests.opened.
-      find_by(source_project: @project, source_branch: @head_ref, target_branch: @base_ref)
+      find_by(source_project: @project, source_branch: @head_ref, target_branch: @start_ref)
   end
 end
diff --git a/app/controllers/projects/merge_requests_controller.rb b/app/controllers/projects/merge_requests_controller.rb
index dd86b940a08..df1943dd9bb 100644
--- a/app/controllers/projects/merge_requests_controller.rb
+++ b/app/controllers/projects/merge_requests_controller.rb
@@ -58,14 +58,17 @@ class Projects::MergeRequestsController < Projects::ApplicationController
 
     respond_to do |format|
       format.html
-      format.json   { render json: @merge_request }
+      
+      format.json do
+        render json: @merge_request
+      end
+
       format.patch  do
-        headers.store(*Gitlab::Workhorse.send_git_patch(@project.repository,
-                                                        @merge_request.diff_base_commit.id,
-                                                        @merge_request.last_commit.id))
-        headers['Content-Disposition'] = 'inline'
-        head :ok
+        return render_404 unless @merge_request.diff_refs
+
+        send_git_patch @project.repository, @merge_request.diff_refs
       end
+
       format.diff do
         return render_404 unless @merge_request.diff_refs
 
@@ -77,18 +80,15 @@ class Projects::MergeRequestsController < Projects::ApplicationController
   def diffs
     apply_diff_view_cookie!
 
-    @commit = @merge_request.last_commit
-    @base_commit = @merge_request.diff_base_commit
-
-    # MRs created before 8.4 don't have a diff_base_commit,
-    # but we need it for the "View file @ ..." link by deleted files
-    @base_commit ||= @merge_request.first_commit.parent || @merge_request.first_commit
+    @commit = @merge_request.diff_head_commit
+    @base_commit = @merge_request.diff_base_commit || @merge_request.likely_diff_base_commit
 
     @comments_target = {
       noteable_type: 'MergeRequest',
       noteable_id: @merge_request.id
     }
 
+    @use_legacy_diff_notes = !@merge_request.support_new_diff_notes?
     @grouped_diff_notes = @merge_request.notes.grouped_diff_notes
 
     Banzai::NoteRenderer.render(
@@ -134,7 +134,7 @@ class Projects::MergeRequestsController < Projects::ApplicationController
     @target_project = merge_request.target_project
     @source_project = merge_request.source_project
     @commits = @merge_request.compare_commits.reverse
-    @commit = @merge_request.last_commit
+    @commit = @merge_request.diff_head_commit
     @base_commit = @merge_request.diff_base_commit
     @diffs = @merge_request.compare.diffs(diff_options) if @merge_request.compare
     @diff_notes_disabled = true
@@ -212,7 +212,7 @@ class Projects::MergeRequestsController < Projects::ApplicationController
       return
     end
 
-    if params[:sha] != @merge_request.source_sha
+    if params[:sha] != @merge_request.diff_head_sha
       @status = :sha_mismatch
       return
     end
@@ -274,16 +274,16 @@ class Projects::MergeRequestsController < Projects::ApplicationController
       status ||= "preparing"
     else
       ci_service = @merge_request.source_project.ci_service
-      status = ci_service.commit_status(merge_request.last_commit.sha, merge_request.source_branch) if ci_service
+      status = ci_service.commit_status(merge_request.diff_head_sha, merge_request.source_branch) if ci_service
 
       if ci_service.respond_to?(:commit_coverage)
-        coverage = ci_service.commit_coverage(merge_request.last_commit.sha, merge_request.source_branch)
+        coverage = ci_service.commit_coverage(merge_request.diff_head_sha, merge_request.source_branch)
       end
     end
 
     response = {
       title: merge_request.title,
-      sha: merge_request.last_commit_short_sha,
+      sha: merge_request.diff_head_commit.short_id,
       status: status,
       coverage: coverage
     }
diff --git a/app/controllers/projects/notes_controller.rb b/app/controllers/projects/notes_controller.rb
index e14fe26dde7..3eacdbbd067 100644
--- a/app/controllers/projects/notes_controller.rb
+++ b/app/controllers/projects/notes_controller.rb
@@ -128,7 +128,7 @@ class Projects::NotesController < Projects::ApplicationController
     elsif note.valid?
       Banzai::NoteRenderer.render([note], @project, current_user)
 
-      {
+      attrs = {
         valid: true,
         id: note.id,
         discussion_id: note.discussion_id,
@@ -138,6 +138,23 @@ class Projects::NotesController < Projects::ApplicationController
         discussion_html: note_to_discussion_html(note),
         discussion_with_diff_html: note_to_discussion_with_diff_html(note)
       }
+
+      # The discussion_id is used to add the comment to the correct discussion
+      # element on the merge request page. Among other things, the discussion_id
+      # contains the sha of head commit of the merge request.
+      # When new commits are pushed into the merge request after the initial
+      # load of the merge request page, the discussion elements will still have
+      # the old discussion_ids, with the old head commit sha. The new comment,
+      # however, will have the new discussion_id with the new commit sha.
+      # To ensure that these new comments will still end up in the correct
+      # discussion element, we also send the original discussion_id, with the
+      # old commit sha, along, and fall back on this value when no discussion
+      # element with the new discussion_id could be found.
+      if note.new_diff_note? && note.position != note.original_position
+        attrs[:original_discussion_id] = note.original_discussion_id
+      end
+
+      attrs
     else
       {
         valid: false,
@@ -154,7 +171,7 @@ class Projects::NotesController < Projects::ApplicationController
   def note_params
     params.require(:note).permit(
       :note, :noteable, :noteable_id, :noteable_type, :project_id,
-      :attachment, :line_code, :commit_id, :type
+      :attachment, :line_code, :commit_id, :type, :position
     )
   end
 
diff --git a/app/helpers/application_helper.rb b/app/helpers/application_helper.rb
index 62d13a4b4f3..03495cf5ec4 100644
--- a/app/helpers/application_helper.rb
+++ b/app/helpers/application_helper.rb
@@ -306,4 +306,15 @@ module ApplicationHelper
   def truncate_first_line(message, length = 50)
     truncate(message.each_line.first.chomp, length: length) if message
   end
+
+  # While similarly named to Rails's `link_to_if`, this method behaves quite differently.
+  # If `condition` is truthy, a link will be returned with the result of the block
+  # as its body. If `condition` is falsy, only the result of the block will be returned.
+  def conditional_link_to(condition, options, html_options = {}, &block)
+    if condition
+      link_to options, html_options, &block
+    else
+      capture(&block)
+    end
+  end
 end
diff --git a/app/helpers/diff_helper.rb b/app/helpers/diff_helper.rb
index a282a67020f..b61266465e2 100644
--- a/app/helpers/diff_helper.rb
+++ b/app/helpers/diff_helper.rb
@@ -30,12 +30,8 @@ module DiffHelper
     options
   end
 
-  def safe_diff_files(diffs, diff_refs)
-    diffs.decorate! { |diff| Gitlab::Diff::File.new(diff, diff_refs) }
-  end
-
-  def generate_line_code(file_path, line)
-    Gitlab::Diff::LineCode.generate(file_path, line.new_pos, line.old_pos)
+  def safe_diff_files(diffs, diff_refs: nil, repository: nil)
+    diffs.decorate! { |diff| Gitlab::Diff::File.new(diff, diff_refs: diff_refs, repository: repository) }
   end
 
   def unfold_bottom_class(bottom)
@@ -93,6 +89,8 @@ module DiffHelper
   end
 
   def commit_for_diff(diff_file)
+    return diff_file.content_commit if diff_file.content_commit
+    
     if diff_file.deleted_file
       @base_commit || @commit.parent || @commit
     else
@@ -100,10 +98,11 @@ module DiffHelper
     end
   end
 
-  def diff_file_html_data(project, diff_commit, diff_file)
+  def diff_file_html_data(project, diff_file)
+    commit = commit_for_diff(diff_file)
     {
       blob_diff_path: namespace_project_blob_diff_path(project.namespace, project,
-                                                       tree_join(diff_commit.id, diff_file.file_path))
+                                                       tree_join(commit.id, diff_file.file_path))
     }
   end
 
diff --git a/app/helpers/dropdowns_helper.rb b/app/helpers/dropdowns_helper.rb
index 7c140538012..4566f3782cc 100644
--- a/app/helpers/dropdowns_helper.rb
+++ b/app/helpers/dropdowns_helper.rb
@@ -39,7 +39,7 @@ module DropdownsHelper
     end
   end
 
-  def dropdown_toggle(toggle_text, data_attr, options)
+  def dropdown_toggle(toggle_text, data_attr, options = {})
     content_tag(:button, class: "dropdown-menu-toggle #{options[:toggle_class] if options.has_key?(:toggle_class)}", id: (options[:id] if options.has_key?(:id)), type: "button", data: data_attr) do
       output = content_tag(:span, toggle_text, class: "dropdown-toggle-text")
       output << icon('chevron-down')
diff --git a/app/helpers/merge_requests_helper.rb b/app/helpers/merge_requests_helper.rb
index 1dd07a2a220..c7dedfe9254 100644
--- a/app/helpers/merge_requests_helper.rb
+++ b/app/helpers/merge_requests_helper.rb
@@ -27,7 +27,7 @@ module MergeRequestsHelper
   end
 
   def ci_build_details_path(merge_request)
-    build_url = merge_request.source_project.ci_service.build_page(merge_request.last_commit.sha, merge_request.source_branch)
+    build_url = merge_request.source_project.ci_service.build_page(merge_request.diff_head_sha, merge_request.source_branch)
     return nil unless build_url
 
     parsed_url = URI.parse(build_url)
diff --git a/app/helpers/notes_helper.rb b/app/helpers/notes_helper.rb
index e1c8152885a..efb648bd8a2 100644
--- a/app/helpers/notes_helper.rb
+++ b/app/helpers/notes_helper.rb
@@ -24,33 +24,54 @@ module NotesHelper
     }.to_json
   end
 
-  def note_text_file_data
+  def diff_view_data
     return {} unless defined?(@comments_target) && @comments_target.any?
 
-    @comments_target.slice(:noteable_id, :noteable_type, :commit_id).merge(note_type: LegacyDiffNote.name)
+    @comments_target.slice(:noteable_id, :noteable_type, :commit_id)
   end
 
-  def note_line_parallel_data(line_code, line_type)
-    data = {
+  def use_legacy_diff_notes?(line_code)
+    return @use_legacy_diff_notes if defined?(@use_legacy_diff_notes)
+
+    # If the controller doesn't force the use of legacy diff notes, we
+    # determine this on a line-by-line basis by seeing if there already exist
+    # active legacy diff notes at this line, in which case newly created notes
+    # will use the legacy technology as well.
+    # We do this because the discussion_id values of legacy and "new" diff
+    # notes, which are used to group notes on the merge request discussion tab,
+    # are incompatible.
+    # If we didn't, diff notes that would show for the same line on the changes
+    # tab, would show in different discussions on the discussion tab.
+    line_diff_notes = @grouped_diff_notes[line_code]
+    @use_legacy_diff_notes = line_diff_notes && line_diff_notes.any?(&:legacy_diff_note?)
+  end
+
+  def diff_view_line_data(line_code, position, line_type)
+    return if @diff_notes_disabled
+
+    {
       line_code: line_code,
+      position:  position.to_json,
       line_type: line_type,
+      note_type: (use_legacy_diff_notes?(line_code) ? LegacyDiffNote.name : DiffNote.name),
+      discussion_id: discussion_id(line_code, position)
     }
+  end
 
-    unless @diff_notes_disabled
-      data.merge!(
-        discussion_id: discussion_id(line_code)
+  def discussion_id(line_code, position)
+    if use_legacy_diff_notes?(line_code)
+      LegacyDiffNote.build_discussion_id(
+        @comments_target[:noteable_type],
+        @comments_target[:noteable_id] || @comments_target[:commit_id],
+        line_code
       )
+    else
+      discussion_id = DiffNote.build_discussion_id(
+         @comments_target[:noteable_type],
+         @comments_target[:noteable_id] || @comments_target[:commit_id],
+         position
+       )
     end
-
-    data
-  end
-
-  def discussion_id(line_code)
-    LegacyDiffNote.build_discussion_id(
-      @comments_target[:noteable_type],
-      @comments_target[:noteable_id] || @comments_target[:commit_id],
-      line_code
-    )
   end
 
   def link_to_reply_discussion(note, line_type = nil)
@@ -65,14 +86,15 @@ module NotesHelper
     }
 
     if note.diff_note?
-      data.merge!(
-        line_code: note.line_code,
-        note_type: LegacyDiffNote.name
-      )
+      data[:note_type] = note.type
+
+      data.merge!(note.diff_attributes)
     end
 
-    button_tag 'Reply...', class: 'btn btn-text-field js-discussion-reply-button',
-                           data: data, title: 'Add a reply'
+    content_tag(:div, class: "discussion-reply-holder") do
+      button_tag 'Reply...', class: 'btn btn-text-field js-discussion-reply-button',
+                             data: data, title: 'Add a reply'
+    end
   end
 
   def note_max_access_for_user(note)
@@ -84,4 +106,14 @@ module NotesHelper
     full_key = { project: note.project, user_id: note.author_id }
     @max_access_by_user_id[full_key]
   end
+
+  def diff_note_path(note)
+    return unless note.diff_note?
+
+    if note.for_merge_request? && note.active?
+      diffs_namespace_project_merge_request_path(note.project.namespace, note.project, note.noteable, anchor: note.line_code)
+    elsif note.for_commit?
+      namespace_project_commit_path(note.project.namespace, note.project, note.noteable, anchor: note.line_code)
+    end
+  end
 end
diff --git a/app/helpers/projects_helper.rb b/app/helpers/projects_helper.rb
index 88787576dd3..3bbbb26cff2 100644
--- a/app/helpers/projects_helper.rb
+++ b/app/helpers/projects_helper.rb
@@ -293,7 +293,11 @@ module ProjectsHelper
   end
 
   def last_push_event
-    if current_user
+    return unless current_user
+
+    if fork = current_user.fork_of(@project)
+      current_user.recent_push(fork.id)
+    else
       current_user.recent_push(@project.id)
     end
   end
diff --git a/app/helpers/workhorse_helper.rb b/app/helpers/workhorse_helper.rb
index 2bd0dbfd095..65598ad9ed3 100644
--- a/app/helpers/workhorse_helper.rb
+++ b/app/helpers/workhorse_helper.rb
@@ -1,4 +1,4 @@
-# Helpers to send Git blobs, diffs or archives through Workhorse.
+# Helpers to send Git blobs, diffs, patches or archives through Workhorse.
 # Workhorse will also serve files when using `send_file`.
 module WorkhorseHelper
   # Send a Git blob through Workhorse
@@ -16,6 +16,13 @@ module WorkhorseHelper
     head :ok
   end
 
+  # Send a Git patch through Workhorse
+  def send_git_patch(repository, diff_refs)
+    headers.store(*Gitlab::Workhorse.send_git_patch(repository, diff_refs))
+    headers['Content-Disposition'] = 'inline'
+    head :ok
+  end
+
   # Archive a Git repository and send it through Workhorse
   def send_git_archive(repository, ref:, format:)
     headers.store(*Gitlab::Workhorse.send_git_archive(repository, ref: ref, format: format))
diff --git a/app/models/commit.rb b/app/models/commit.rb
index 174ccbaea6c..2ef3973c160 100644
--- a/app/models/commit.rb
+++ b/app/models/commit.rb
@@ -214,6 +214,13 @@ class Commit
     @raw.short_id(7)
   end
 
+  def diff_refs
+    Gitlab::Diff::DiffRefs.new(
+      base_sha: self.parent_id || self.sha,
+      head_sha: self.sha
+    )
+  end
+
   def pipelines
     @pipeline ||= project.pipelines.where(sha: sha)
   end
diff --git a/app/models/concerns/note_on_diff.rb b/app/models/concerns/note_on_diff.rb
new file mode 100644
index 00000000000..2785fbb21c9
--- /dev/null
+++ b/app/models/concerns/note_on_diff.rb
@@ -0,0 +1,52 @@
+module NoteOnDiff
+  extend ActiveSupport::Concern
+
+  NUMBER_OF_TRUNCATED_DIFF_LINES = 16
+
+  included do
+    delegate :blob, :highlighted_diff_lines, to: :diff_file, allow_nil: true
+  end
+
+  def diff_note?
+    true
+  end
+
+  def diff_file
+    raise NotImplementedError
+  end
+
+  def diff_line
+    raise NotImplementedError
+  end
+
+  def for_line?(line)
+    raise NotImplementedError
+  end
+
+  def diff_attributes
+    raise NotImplementedError
+  end
+
+  def can_be_award_emoji?
+    false
+  end
+
+  # Returns an array of at most 16 highlighted lines above a diff note
+  def truncated_diff_lines
+    prev_lines = []
+
+    highlighted_diff_lines.each do |line|
+      if line.meta?
+        prev_lines.clear
+      else
+        prev_lines << line
+
+        break if for_line?(line)
+
+        prev_lines.shift if prev_lines.length >= NUMBER_OF_TRUNCATED_DIFF_LINES
+      end
+    end
+
+    prev_lines
+  end
+end
diff --git a/app/models/deployment.rb b/app/models/deployment.rb
index e498ca96e3c..520026c18dd 100644
--- a/app/models/deployment.rb
+++ b/app/models/deployment.rb
@@ -11,6 +11,8 @@ class Deployment < ActiveRecord::Base
 
   delegate :name, to: :environment, prefix: true
 
+  after_save :keep_around_commit
+
   def commit
     project.commit(sha)
   end
@@ -26,4 +28,8 @@ class Deployment < ActiveRecord::Base
   def last?
     self == environment.last_deployment
   end
+
+  def keep_around_commit
+    project.repository.keep_around(self.sha)
+  end
 end
diff --git a/app/models/diff_note.rb b/app/models/diff_note.rb
new file mode 100644
index 00000000000..9671955db36
--- /dev/null
+++ b/app/models/diff_note.rb
@@ -0,0 +1,127 @@
+class DiffNote < Note
+  include NoteOnDiff
+
+  serialize :original_position, Gitlab::Diff::Position
+  serialize :position, Gitlab::Diff::Position
+
+  validates :original_position, presence: true
+  validates :position, presence: true
+  validates :diff_line, presence: true
+  validates :line_code, presence: true, line_code: true
+  validates :noteable_type, inclusion: { in: ['Commit', 'MergeRequest'] }
+  validate :positions_complete
+  validate :verify_supported
+
+  before_validation :set_original_position, :update_position, on: :create
+  before_validation :set_line_code
+  after_save :keep_around_commits
+
+  class << self
+    def build_discussion_id(noteable_type, noteable_id, position)
+      [super(noteable_type, noteable_id), *position.key].join("-")
+    end
+  end
+
+  def new_diff_note?
+    true
+  end
+
+  def diff_attributes
+    { position: position.to_json }
+  end
+
+  def discussion_id
+    @discussion_id ||= self.class.build_discussion_id(noteable_type, noteable_id || commit_id, position)
+  end
+
+  def original_discussion_id
+    @original_discussion_id ||= self.class.build_discussion_id(noteable_type, noteable_id || commit_id, original_position)
+  end
+
+  def position=(new_position)
+    if new_position.is_a?(String)
+      new_position = JSON.parse(new_position) rescue nil
+    end
+
+    if new_position.is_a?(Hash)
+      new_position = new_position.with_indifferent_access
+      new_position = Gitlab::Diff::Position.new(new_position)
+    end
+
+    super(new_position)
+  end
+
+  def diff_file
+    @diff_file ||= self.original_position.diff_file(self.project.repository)
+  end
+
+  def diff_line
+    @diff_line ||= diff_file.line_for_position(self.original_position) if diff_file
+  end
+
+  def for_line?(line)
+    diff_file.position(line) == self.original_position
+  end
+
+  def active?(diff_refs = nil)
+    return false unless supported?
+    return true if for_commit?
+
+    diff_refs ||= self.noteable.diff_refs
+
+    self.position.diff_refs == diff_refs
+  end
+
+  private
+
+  def supported?
+    !self.for_merge_request? || self.noteable.support_new_diff_notes?
+  end
+
+  def set_original_position
+    self.original_position = self.position.dup
+  end
+
+  def set_line_code
+    self.line_code = self.position.line_code(self.project.repository)
+  end
+
+  def update_position
+    return unless supported?
+    return if for_commit?
+
+    return if active?
+
+    Notes::DiffPositionUpdateService.new(
+      self.project,
+      nil,
+      old_diff_refs: self.position.diff_refs,
+      new_diff_refs: self.noteable.diff_refs,
+      paths: self.position.paths
+    ).execute(self)
+  end
+
+  def verify_supported
+    return if supported?
+
+    errors.add(:noteable, "doesn't support new-style diff notes")
+  end
+
+  def positions_complete
+    return if self.original_position.complete? && self.position.complete?
+
+    errors.add(:position, "is invalid")
+  end
+
+  def keep_around_commits
+    project.repository.keep_around(self.original_position.base_sha)
+    project.repository.keep_around(self.original_position.start_sha)
+    project.repository.keep_around(self.original_position.head_sha)
+
+    if self.position != self.original_position
+      project.repository.keep_around(self.position.base_sha)
+      project.repository.keep_around(self.position.start_sha)
+      project.repository.keep_around(self.position.head_sha)
+    end
+  end
+end
diff --git a/app/models/event.rb b/app/models/event.rb
index d7d23c7ae6d..fd736d12359 100644
--- a/app/models/event.rb
+++ b/app/models/event.rb
@@ -67,7 +67,7 @@ class Event < ActiveRecord::Base
     elsif issue? || issue_note?
       Ability.abilities.allowed?(user, :read_issue, note? ? note_target : target)
     else
-      ((merge_request? || note?) && target) || milestone?
+      ((merge_request? || note?) && target.present?) || milestone?
     end
   end
 
@@ -136,7 +136,7 @@ class Event < ActiveRecord::Base
   end
 
   def note?
-    target_type == "Note"
+    target.is_a?(Note)
   end
 
   def issue?
diff --git a/app/models/label.rb b/app/models/label.rb
index 49c352cc239..dc5586f5756 100644
--- a/app/models/label.rb
+++ b/app/models/label.rb
@@ -20,10 +20,10 @@ class Label < ActiveRecord::Base
   validates :color, color: true, allow_blank: false
   validates :project, presence: true, unless: Proc.new { |service| service.template? }
 
-  # Don't allow '?', '&', and ',' for label titles
+  # Don't allow ',' for label titles
   validates :title,
             presence: true,
-            format: { with: /\A[^&\?,]+\z/ },
+            format: { with: /\A[^,]+\z/ },
             uniqueness: { scope: :project_id }
 
   before_save :nullify_priority
@@ -58,8 +58,8 @@ class Label < ActiveRecord::Base
       (?:
         (?<label_id>\d+) | # Integer-based label ID, or
         (?<label_name>
-          [A-Za-z0-9_-]+ | # String-based single-word label title, or
-          "[^&\?,]+"       # String-based multi-word label surrounded in quotes
+          [A-Za-z0-9_\-\?&]+ | # String-based single-word label title, or
+          "[^,]+"              # String-based multi-word label surrounded in quotes
         )
       )
     }x
@@ -114,7 +114,7 @@ class Label < ActiveRecord::Base
   end
 
   def title=(value)
-    write_attribute(:title, Sanitize.clean(value.to_s)) if value.present?
+    write_attribute(:title, sanitize_title(value)) if value.present?
   end
 
   private
@@ -132,4 +132,8 @@ class Label < ActiveRecord::Base
   def nullify_priority
     self.priority = nil if priority.blank?
   end
+
+  def sanitize_title(value)
+    CGI.unescapeHTML(Sanitize.clean(value.to_s))
+  end
 end
diff --git a/app/models/legacy_diff_note.rb b/app/models/legacy_diff_note.rb
index 33d2a69ebaf..790dfd4d480 100644
--- a/app/models/legacy_diff_note.rb
+++ b/app/models/legacy_diff_note.rb
@@ -1,4 +1,6 @@
 class LegacyDiffNote < Note
+  include NoteOnDiff
+
   serialize :st_diff
 
   validates :line_code, presence: true, line_code: true
@@ -11,12 +13,12 @@ class LegacyDiffNote < Note
     end
   end
 
-  def diff_note?
+  def legacy_diff_note?
     true
   end
 
-  def legacy_diff_note?
-    true
+  def diff_attributes
+    { line_code: line_code }
   end
 
   def discussion_id
@@ -27,61 +29,20 @@ class LegacyDiffNote < Note
     line_code.split('_')[0] if line_code
   end
 
-  def diff_old_line
-    line_code.split('_')[1].to_i if line_code
-  end
-
-  def diff_new_line
-    line_code.split('_')[2].to_i if line_code
-  end
-
   def diff
     @diff ||= Gitlab::Git::Diff.new(st_diff) if st_diff.respond_to?(:map)
   end
 
-  def diff_file_path
-    diff.new_path.presence || diff.old_path
-  end
-
-  def diff_lines
-    @diff_lines ||= Gitlab::Diff::Parser.new.parse(diff.diff.each_line)
+  def diff_file
+    @diff_file ||= Gitlab::Diff::File.new(diff, repository: self.project.repository) if diff
   end
 
   def diff_line
-    @diff_line ||= diff_lines.find { |line| generate_line_code(line) == self.line_code }
+    @diff_line ||= diff_file.line_for_line_code(self.line_code)
   end
 
-  def diff_line_text
-    diff_line.try(:text)
-  end
-
-  def diff_line_type
-    diff_line.try(:type)
-  end
-
-  def highlighted_diff_lines
-    Gitlab::Diff::Highlight.new(diff_lines).highlight
-  end
-
-  def truncated_diff_lines
-    max_number_of_lines = 16
-    prev_match_line = nil
-    prev_lines = []
-
-    highlighted_diff_lines.each do |line|
-      if line.type == "match"
-        prev_lines.clear
-        prev_match_line = line
-      else
-        prev_lines << line
-
-        break if generate_line_code(line) == self.line_code
-
-        prev_lines.shift if prev_lines.length >= max_number_of_lines
-      end
-    end
-
-    prev_lines
+  def for_line?(line)
+    !line.meta? && diff_file.line_code(line) == self.line_code
   end
 
   # Check if this note is part of an "active" discussion
@@ -102,7 +63,7 @@ class LegacyDiffNote < Note
     if noteable_diff
       parsed_lines = Gitlab::Diff::Parser.new.parse(noteable_diff.diff.each_line)
 
-      @active = parsed_lines.any? { |line_obj| line_obj.text == diff_line_text }
+      @active = parsed_lines.any? { |line_obj| line_obj.text == diff_line.text }
     else
       @active = false
     end
@@ -110,10 +71,6 @@ class LegacyDiffNote < Note
     @active
   end
 
-  def award_emoji_supported?
-    false
-  end
-
   private
 
   def find_diff
@@ -149,10 +106,6 @@ class LegacyDiffNote < Note
     self.class.where(attributes).last.try(:diff)
   end
 
-  def generate_line_code(line)
-    Gitlab::Diff::LineCode.generate(diff_file_path, line.new_pos, line.old_pos)
-  end
-
   # Find the diff on noteable that matches our own
   def find_noteable_diff
     diffs = noteable.diffs(Commit.max_diff_options)
diff --git a/app/models/merge_request.rb b/app/models/merge_request.rb
index 4f7e1d2f302..083e93f1ee7 100644
--- a/app/models/merge_request.rb
+++ b/app/models/merge_request.rb
@@ -16,7 +16,7 @@ class MergeRequest < ActiveRecord::Base
 
   serialize :merge_params, Hash
 
-  after_create :create_merge_request_diff, unless: :importing
+  after_create :create_merge_request_diff, unless: :importing?
   after_update :update_merge_request_diff
 
   delegate :commits, :diffs, :real_size, to: :merge_request_diff, prefix: nil
@@ -29,10 +29,6 @@ class MergeRequest < ActiveRecord::Base
   # when creating new merge request
   attr_accessor :can_be_created, :compare_commits, :compare
 
-  # Temporary fields to store target_sha, and base_sha to
-  # compare when importing pull requests from GitHub
-  attr_accessor :base_target_sha, :head_source_sha
-
   state_machine :state, initial: :opened do
     event :close do
       transition [:reopened, :opened] => :closed
@@ -89,12 +85,7 @@ class MergeRequest < ActiveRecord::Base
     state :cannot_be_merged
 
     around_transition do |merge_request, transition, block|
-      merge_request.record_timestamps = false
-      begin
-        block.call
-      ensure
-        merge_request.record_timestamps = true
-      end
+      Gitlab::Timeless.timeless(merge_request, &block)
     end
   end
 
@@ -169,10 +160,6 @@ class MergeRequest < ActiveRecord::Base
     reference
   end
 
-  def last_commit
-    merge_request_diff ? merge_request_diff.last_commit : compare_commits.last
-  end
-
   def first_commit
     merge_request_diff ? merge_request_diff.first_commit : compare_commits.first
   end
@@ -182,15 +169,86 @@ class MergeRequest < ActiveRecord::Base
   end
 
   def diff_base_commit
-    if merge_request_diff
+    if persisted?
       merge_request_diff.base_commit
-    elsif source_sha
-      self.target_project.merge_base_commit(self.source_sha, self.target_branch)
+    elsif diff_start_commit && diff_head_commit
+      self.target_project.merge_base_commit(diff_start_sha, diff_head_sha)
+    end
+  end
+
+  # MRs created before 8.4 don't store a MergeRequestDiff#base_commit_sha,
+  # but we need to get a commit for the "View file @ ..." link by deleted files,
+  # so we find the likely one if we can't get the actual one.
+  # This will not be the actual base commit if the target branch was merged into
+  # the source branch after the merge request was created, but it is good enough
+  # for the specific purpose of linking to a commit.
+  # It is not good enough for use in `Gitlab::Git::DiffRefs`, which needs the
+  # true base commit, so we can't simply have `#diff_base_commit` fall back on
+  # this method.
+  def likely_diff_base_commit
+    first_commit.parent || first_commit
+  end
+
+  def diff_start_commit
+    if persisted?
+      merge_request_diff.start_commit
+    else
+      target_branch_head
+    end
+  end
+
+  def diff_head_commit
+    if persisted?
+      merge_request_diff.head_commit
+    else
+      source_branch_head
     end
   end
 
-  def last_commit_short_sha
-    last_commit.short_id
+  def diff_start_sha
+    diff_start_commit.try(:sha)
+  end
+
+  def diff_base_sha
+    diff_base_commit.try(:sha)
+  end
+
+  def diff_head_sha
+    diff_head_commit.try(:sha)
+  end
+
+  # When importing a pull request from GitHub, the old and new branches may no
+  # longer actually exist by those names, but we need to recreate the merge
+  # request diff with the right source and target shas.
+  # We use these attributes to force these to the intended values.
+  attr_writer :target_branch_sha, :source_branch_sha
+
+  def source_branch_head
+    source_branch_ref = @source_branch_sha || source_branch
+    source_project.repository.commit(source_branch) if source_branch_ref
+  end
+
+  def target_branch_head
+    target_branch_ref = @target_branch_sha || target_branch
+    target_project.repository.commit(target_branch) if target_branch_ref
+  end
+
+  def target_branch_sha
+    target_branch_head.try(:sha)
+  end
+
+  def source_branch_sha
+    source_branch_head.try(:sha)
+  end
+
+  def diff_refs
+    return unless diff_start_commit || diff_base_commit
+
+    Gitlab::Diff::DiffRefs.new(
+      base_sha:  diff_base_sha,
+      start_sha: diff_start_sha,
+      head_sha:  diff_head_sha
+    )
   end
 
   def validate_branches
@@ -227,21 +285,30 @@ class MergeRequest < ActiveRecord::Base
 
   def update_merge_request_diff
     if source_branch_changed? || target_branch_changed?
-      reload_code
+      reload_diff
     end
   end
 
-  def reload_code
-    if merge_request_diff && open?
-      merge_request_diff.reload_content
-    end
+  def reload_diff
+    return unless merge_request_diff && open?
+
+    old_diff_refs = self.diff_refs
+
+    merge_request_diff.reload_content
+
+    new_diff_refs = self.diff_refs
+
+    update_diff_notes_positions(
+      old_diff_refs: old_diff_refs,
+      new_diff_refs: new_diff_refs
+    )
   end
 
   def check_if_can_be_merged
     return unless unchecked?
 
     can_be_merged =
-      !broken? && project.repository.can_be_merged?(source_sha, target_branch)
+      !broken? && project.repository.can_be_merged?(diff_head_sha, target_branch)
 
     if can_be_merged
       mark_as_mergeable
@@ -293,7 +360,7 @@ class MergeRequest < ActiveRecord::Base
     !source_project.protected_branch?(source_branch) &&
       !source_project.root_ref?(source_branch) &&
       Ability.abilities.allowed?(current_user, :push_code, source_project) &&
-      last_commit == source_project.commit(source_branch)
+      diff_head_commit == source_branch_head
   end
 
   def should_remove_source_branch?
@@ -331,8 +398,8 @@ class MergeRequest < ActiveRecord::Base
       work_in_progress: work_in_progress?
     }
 
-    if last_commit
-      attrs.merge!(last_commit: last_commit.hook_attrs)
+    if diff_head_commit
+      attrs.merge!(last_commit: diff_head_commit.hook_attrs)
     end
 
     attributes.merge!(attrs)
@@ -510,22 +577,6 @@ class MergeRequest < ActiveRecord::Base
     end
   end
 
-  def target_sha
-    return @base_target_sha if defined?(@base_target_sha)
-
-    target_project.repository.commit(target_branch).try(:sha)
-  end
-
-  def source_sha
-    return @head_source_sha if defined?(@head_source_sha)
-
-    last_commit.try(:sha) || source_tip.try(:sha)
-  end
-
-  def source_tip
-    source_branch && source_project.repository.commit(source_branch)
-  end
-
   def fetch_ref
     target_project.repository.fetch_ref(
       source_project.repository.path_to_repo,
@@ -558,10 +609,10 @@ class MergeRequest < ActiveRecord::Base
   def diverged_commits_count
     cache = Rails.cache.read(:"merge_request_#{id}_diverged_commits")
 
-    if cache.blank? || cache[:source_sha] != source_sha || cache[:target_sha] != target_sha
+    if cache.blank? || cache[:source_sha] != source_branch_sha || cache[:target_sha] != target_branch_sha
       cache = {
-        source_sha: source_sha,
-        target_sha: target_sha,
+        source_sha: source_branch_sha,
+        target_sha: target_branch_sha,
         diverged_commits_count: compute_diverged_commits_count
       }
       Rails.cache.write(:"merge_request_#{id}_diverged_commits", cache)
@@ -571,9 +622,9 @@ class MergeRequest < ActiveRecord::Base
   end
 
   def compute_diverged_commits_count
-    return 0 unless source_sha && target_sha
+    return 0 unless source_branch_sha && target_branch_sha
 
-    Gitlab::Git::Commit.between(target_project.repository.raw_repository, source_sha, target_sha).size
+    Gitlab::Git::Commit.between(target_project.repository.raw_repository, source_branch_sha, target_branch_sha).size
   end
   private :compute_diverged_commits_count
 
@@ -582,13 +633,7 @@ class MergeRequest < ActiveRecord::Base
   end
 
   def pipeline
-    @pipeline ||= source_project.pipeline(last_commit.id, source_branch) if last_commit && source_project
-  end
-
-  def diff_refs
-    return nil unless diff_base_commit
-
-    [diff_base_commit, last_commit]
+    @pipeline ||= source_project.pipeline(diff_head_sha, source_branch) if diff_head_sha && source_project
   end
 
   def merge_commit
@@ -603,6 +648,36 @@ class MergeRequest < ActiveRecord::Base
     merge_commit
   end
 
+  def support_new_diff_notes?
+    diff_refs && diff_refs.complete?
+  end
+
+  def update_diff_notes_positions(old_diff_refs:, new_diff_refs:)
+    return unless support_new_diff_notes?
+    return if new_diff_refs == old_diff_refs
+
+    active_diff_notes = self.notes.diff_notes.select do |note|
+      note.new_diff_note? && note.active?(old_diff_refs)
+    end
+
+    return if active_diff_notes.empty?
+
+    paths = active_diff_notes.flat_map { |n| n.diff_file.paths }.uniq
+
+    service = Notes::DiffPositionUpdateService.new(
+      self.project,
+      nil,
+      old_diff_refs: old_diff_refs,
+      new_diff_refs: new_diff_refs,
+      paths: paths
+    )
+
+    active_diff_notes.each do |note|
+      service.execute(note)
+      Gitlab::Timeless.timeless(note, &:save)
+    end
+  end
+
   def keep_around_commit
     project.repository.keep_around(self.merge_commit_sha)
   end
diff --git a/app/models/merge_request_diff.rb b/app/models/merge_request_diff.rb
index 0fcde6fc8f1..ba235750aeb 100644
--- a/app/models/merge_request_diff.rb
+++ b/app/models/merge_request_diff.rb
@@ -7,7 +7,7 @@ class MergeRequestDiff < ActiveRecord::Base
 
   belongs_to :merge_request
 
-  delegate :head_source_sha, :target_branch, :source_branch, to: :merge_request, prefix: nil
+  delegate :source_branch_sha, :target_branch_sha, :target_branch, :source_branch, to: :merge_request, prefix: nil
 
   state_machine :state, initial: :empty do
     state :collected
@@ -24,7 +24,7 @@ class MergeRequestDiff < ActiveRecord::Base
   serialize :st_diffs
 
   after_create :reload_content, unless: :importing?
-  after_save :keep_around_commit
+  after_save :keep_around_commits, unless: :importing?
 
   def reload_content
     reload_commits
@@ -39,9 +39,9 @@ class MergeRequestDiff < ActiveRecord::Base
     if options[:ignore_whitespace_change]
       @diffs_no_whitespace ||= begin
         compare = Gitlab::Git::Compare.new(
-          self.repository.raw_repository,
-          self.base,
-          self.head,
+          repository.raw_repository,
+          self.start_commit_sha || self.target_branch_sha,
+          self.head_commit_sha || self.source_branch_sha,
         )
         compare.diffs(options)
       end
@@ -63,37 +63,39 @@ class MergeRequestDiff < ActiveRecord::Base
   end
 
   def base_commit
-    return nil unless self.base_commit_sha
+    return unless self.base_commit_sha
 
-    merge_request.target_project.commit(self.base_commit_sha)
+    project.commit(self.base_commit_sha)
   end
 
-  def last_commit_short_sha
-    @last_commit_short_sha ||= last_commit.short_id
-  end
+  def start_commit
+    return unless self.start_commit_sha
 
-  def dump_commits(commits)
-    commits.map(&:to_hash)
+    project.commit(self.start_commit_sha)
   end
 
-  def load_commits(array)
-    array.map { |hash| Commit.new(Gitlab::Git::Commit.new(hash), merge_request.source_project) }
-  end
+  def head_commit
+    return last_commit unless self.head_commit_sha
 
-  def dump_diffs(diffs)
-    if diffs.respond_to?(:map)
-      diffs.map(&:to_hash)
-    end
+    project.commit(self.head_commit_sha)
   end
 
-  def load_diffs(raw, options)
-    if raw.respond_to?(:each)
-      Gitlab::Git::DiffCollection.new(raw, options)
-    else
-      Gitlab::Git::DiffCollection.new([])
-    end
+  def compare
+    @compare ||=
+      begin
+        # Update ref for merge request
+        merge_request.fetch_ref
+
+        Gitlab::Git::Compare.new(
+          repository.raw_repository,
+          self.target_branch_sha,
+          self.source_branch_sha
+        )
+      end
   end
 
+  private
+
   # Collect array of Git::Commit objects
   # between target and source branches
   def unmerged_commits
@@ -106,6 +108,14 @@ class MergeRequestDiff < ActiveRecord::Base
     commits
   end
 
+  def dump_commits(commits)
+    commits.map(&:to_hash)
+  end
+
+  def load_commits(array)
+    array.map { |hash| Commit.new(Gitlab::Git::Commit.new(hash), merge_request.source_project) }
+  end
+
   # Reload all commits related to current merge request from repo
   # and save it as array of hashes in st_commits db field
   def reload_commits
@@ -120,6 +130,26 @@ class MergeRequestDiff < ActiveRecord::Base
     update_columns_serialized(new_attributes)
   end
 
+  # Collect array of Git::Diff objects
+  # between target and source branches
+  def unmerged_diffs
+    compare.diffs(Commit.max_diff_options)
+  end
+
+  def dump_diffs(diffs)
+    if diffs.respond_to?(:map)
+      diffs.map(&:to_hash)
+    end
+  end
+
+  def load_diffs(raw, options)
+    if raw.respond_to?(:each)
+      Gitlab::Git::DiffCollection.new(raw, options)
+    else
+      Gitlab::Git::DiffCollection.new([])
+    end
+  end
+
   # Reload diffs between branches related to current merge request from repo
   # and save it as array of hashes in st_diffs db field
   def reload_diffs
@@ -147,59 +177,33 @@ class MergeRequestDiff < ActiveRecord::Base
 
     new_attributes[:st_diffs] = new_diffs
 
-    base_commit_sha = self.repository.merge_base(self.head, self.base)
-    new_attributes[:base_commit_sha] = base_commit_sha
-
-    self.repository.keep_around(base_commit_sha)
+    new_attributes[:start_commit_sha] = self.target_branch_sha
+    new_attributes[:head_commit_sha] = self.source_branch_sha
+    new_attributes[:base_commit_sha] = branch_base_sha
 
     update_columns_serialized(new_attributes)
-  end
 
-  # Collect array of Git::Diff objects
-  # between target and source branches
-  def unmerged_diffs
-    compare.diffs(Commit.max_diff_options)
+    keep_around_commits
   end
 
-  def repository
-    merge_request.target_project.repository
+  def project
+    merge_request.target_project
   end
 
-  def source_sha
-    return head_source_sha if head_source_sha.present?
-
-    source_commit = merge_request.source_project.commit(source_branch)
-    source_commit.try(:sha)
+  def repository
+    project.repository
   end
 
-  def target_sha
-    merge_request.target_sha
-  end
+  def branch_base_commit
+    return unless self.source_branch_sha && self.target_branch_sha
 
-  def base
-    self.target_sha || self.target_branch
+    project.merge_base_commit(self.source_branch_sha, self.target_branch_sha)
   end
 
-  def head
-    self.source_sha
+  def branch_base_sha
+    branch_base_commit.try(:sha)
   end
 
-  def compare
-    @compare ||=
-      begin
-        # Update ref for merge request
-        merge_request.fetch_ref
-
-        Gitlab::Git::Compare.new(
-          self.repository.raw_repository,
-          self.base,
-          self.head
-        )
-      end
-  end
-
-  private
-
   #
   # #save or #update_attributes providing changes on serialized attributes do a lot of
   # serialization and deserialization calls resulting in bad performance.
@@ -223,7 +227,9 @@ class MergeRequestDiff < ActiveRecord::Base
     reload
   end
 
-  def keep_around_commit
-    self.repository.keep_around(self.base_commit_sha)
+  def keep_around_commits
+    repository.keep_around(target_branch_sha)
+    repository.keep_around(source_branch_sha)
+    repository.keep_around(branch_base_sha)
   end
 end
diff --git a/app/models/note.rb b/app/models/note.rb
index 81b5c47b738..ffffd0c0838 100644
--- a/app/models/note.rb
+++ b/app/models/note.rb
@@ -56,7 +56,7 @@ class Note < ActiveRecord::Base
   scope :inc_author, ->{ includes(:author) }
   scope :inc_author_project_award_emoji, ->{ includes(:project, :author, :award_emoji) }
 
-  scope :legacy_diff_notes, ->{ where(type: 'LegacyDiffNote') }
+  scope :diff_notes, ->{ where(type: ['LegacyDiffNote', 'DiffNote']) }
   scope :non_diff_notes, ->{ where(type: ['Note', nil]) }
 
   scope :with_associations, -> do
@@ -82,7 +82,7 @@ class Note < ActiveRecord::Base
     end
 
     def grouped_diff_notes
-      legacy_diff_notes.select(&:active?).sort_by(&:created_at).group_by(&:line_code)
+      diff_notes.select(&:active?).sort_by(&:created_at).group_by(&:line_code)
     end
 
     # Searches for notes matching the given query.
@@ -115,6 +115,10 @@ class Note < ActiveRecord::Base
     false
   end
 
+  def new_diff_note?
+    false
+  end
+
   def active?
     true
   end
@@ -193,7 +197,7 @@ class Note < ActiveRecord::Base
   end
 
   def award_emoji?
-    award_emoji_supported? && contains_emoji_only?
+    can_be_award_emoji? && contains_emoji_only?
   end
 
   def emoji_awardable?
@@ -204,7 +208,7 @@ class Note < ActiveRecord::Base
     self.line_code = nil if self.line_code.blank?
   end
 
-  def award_emoji_supported?
+  def can_be_award_emoji?
     noteable.is_a?(Awardable)
   end
 
diff --git a/app/models/notification_setting.rb b/app/models/notification_setting.rb
index d41fc7073c6..121b598b8f3 100644
--- a/app/models/notification_setting.rb
+++ b/app/models/notification_setting.rb
@@ -5,6 +5,7 @@ class NotificationSetting < ActiveRecord::Base
 
   belongs_to :user
   belongs_to :source, polymorphic: true
+  belongs_to :project, foreign_key: 'source_id'
 
   validates :user, presence: true
   validates :level, presence: true
@@ -13,7 +14,13 @@ class NotificationSetting < ActiveRecord::Base
                                     allow_nil: true }
 
   scope :for_groups, -> { where(source_type: 'Namespace') }
-  scope :for_projects, -> { where(source_type: 'Project') }
+
+  # Exclude projects not included by the Project model's default scope (those that are
+  # pending delete).
+  #
+  scope :for_projects, -> do
+    includes(:project).references(:projects).where(source_type: 'Project').where.not(projects: { id: nil })
+  end
 
   EMAIL_EVENTS = [
     :new_note,
diff --git a/app/models/project.rb b/app/models/project.rb
index e5fae15cb19..029026a4e56 100644
--- a/app/models/project.rb
+++ b/app/models/project.rb
@@ -162,9 +162,7 @@ class Project < ActiveRecord::Base
   validates :namespace, presence: true
   validates_uniqueness_of :name, scope: :namespace_id
   validates_uniqueness_of :path, scope: :namespace_id
-  validates :import_url,
-    url: { protocols: %w(ssh git http https) },
-    if: :external_import?
+  validates :import_url, addressable_url: true, if: :external_import?
   validates :star_count, numericality: { greater_than_or_equal_to: 0 }
   validate :check_limit, on: :create
   validate :avatar_type,
@@ -463,6 +461,8 @@ class Project < ActiveRecord::Base
   end
 
   def import_url=(value)
+    return super(value) unless Gitlab::UrlSanitizer.valid?(value)
+
     import_url = Gitlab::UrlSanitizer.new(value)
     create_or_update_import_data(credentials: import_url.credentials)
     super(import_url.sanitized_url)
diff --git a/app/models/project_services/jira_service.rb b/app/models/project_services/jira_service.rb
index 27bf08bf7d9..97bcbacf2b9 100644
--- a/app/models/project_services/jira_service.rb
+++ b/app/models/project_services/jira_service.rb
@@ -144,7 +144,7 @@ class JiraService < IssueTrackerService
     commit_id = if entity.is_a?(Commit)
                   entity.id
                 elsif entity.is_a?(MergeRequest)
-                  entity.last_commit.id
+                  entity.diff_head_sha
                 end
     commit_url = build_entity_url(:commit, commit_id)
 
diff --git a/app/models/repository.rb b/app/models/repository.rb
index 078ca8f4e13..ba66bc47c29 100644
--- a/app/models/repository.rb
+++ b/app/models/repository.rb
@@ -653,16 +653,6 @@ class Repository
     end
   end
 
-  def blob_for_diff(commit, diff)
-    blob_at(commit.id, diff.file_path)
-  end
-
-  def prev_blob_for_diff(commit, diff)
-    if commit.parent_id
-      blob_at(commit.parent_id, diff.old_path)
-    end
-  end
-
   def refs_contains_sha(ref_type, sha)
     args = %W(#{Gitlab.config.git.bin_path} #{ref_type} --contains #{sha})
     names = Gitlab::Popen.popen(args, path_to_repo).first
@@ -911,7 +901,7 @@ class Repository
       if line =~ /^.*:.*:\d+:/
         ref, filename, startline = line.split(':')
         startline = startline.to_i - index
-        extname = File.extname(filename)
+        extname = Regexp.escape(File.extname(filename))
         basename = filename.sub(/#{extname}$/, '')
         break
       end
diff --git a/app/models/sent_notification.rb b/app/models/sent_notification.rb
index a2df899d012..016172c6d7e 100644
--- a/app/models/sent_notification.rb
+++ b/app/models/sent_notification.rb
@@ -1,4 +1,6 @@
 class SentNotification < ActiveRecord::Base
+  serialize :position, Gitlab::Diff::Position
+
   belongs_to :project
   belongs_to :noteable, polymorphic: true
   belongs_to :recipient, class_name: "User"
@@ -7,7 +9,7 @@ class SentNotification < ActiveRecord::Base
   validates :reply_key, uniqueness: true
   validates :noteable_id, presence: true, unless: :for_commit?
   validates :commit_id, presence: true, if: :for_commit?
-  validates :line_code, line_code: true, allow_blank: true
+  validate :note_valid
 
   after_save :keep_around_commit
 
@@ -20,7 +22,7 @@ class SentNotification < ActiveRecord::Base
       find_by(reply_key: reply_key)
     end
 
-    def record(noteable, recipient_id, reply_key, params = {})
+    def record(noteable, recipient_id, reply_key, attrs = {})
       return unless reply_key
 
       noteable_id = nil
@@ -31,7 +33,7 @@ class SentNotification < ActiveRecord::Base
         noteable_id = noteable.id
       end
 
-      params.reverse_merge!(
+      attrs.reverse_merge!(
         project:        noteable.project,
         noteable_type:  noteable.class.name,
         noteable_id:    noteable_id,
@@ -40,13 +42,17 @@ class SentNotification < ActiveRecord::Base
         reply_key:      reply_key
       )
 
-      create(params)
+      create(attrs)
     end
 
-    def record_note(note, recipient_id, reply_key, params = {})
-      params[:line_code] = note.line_code
+    def record_note(note, recipient_id, reply_key, attrs = {})
+      if note.diff_note?
+        attrs[:note_type] = note.type
+
+        attrs.merge!(note.diff_attributes)
+      end
 
-      record(note.noteable, recipient_id, reply_key, params)
+      record(note.noteable, recipient_id, reply_key, attrs)
     end
   end
 
@@ -70,8 +76,33 @@ class SentNotification < ActiveRecord::Base
     self.reply_key
   end
 
+  def note_attributes
+    {
+      project:        self.project,
+      author:         self.recipient,
+      type:           self.note_type,
+      noteable_type:  self.noteable_type,
+      noteable_id:    self.noteable_id,
+      commit_id:      self.commit_id,
+      line_code:      self.line_code,
+      position:       self.position.to_json
+    }
+  end
+
+  def create_note(note)
+    Notes::CreateService.new(
+      self.project,
+      self.recipient,
+      self.note_attributes.merge(note: note)
+    ).execute
+  end
+
   private
 
+  def note_valid
+    Note.new(note_attributes.merge(note: "Test")).valid?
+  end
+
   def keep_around_commit
     project.repository.keep_around(self.commit_id)
   end
diff --git a/app/services/audit_event_service.rb b/app/services/audit_event_service.rb
index a7f090655e1..8a000585e89 100644
--- a/app/services/audit_event_service.rb
+++ b/app/services/audit_event_service.rb
@@ -7,7 +7,7 @@ class AuditEventService
     @details = {
       with: @details[:with],
       target_id: @author.id,
-      target_type: "User",
+      target_type: 'User',
       target_details: @author.name,
     }
 
diff --git a/app/services/auth/container_registry_authentication_service.rb b/app/services/auth/container_registry_authentication_service.rb
index e57b95f21ec..e294a962352 100644
--- a/app/services/auth/container_registry_authentication_service.rb
+++ b/app/services/auth/container_registry_authentication_service.rb
@@ -20,9 +20,11 @@ module Auth
       token.issuer = registry.issuer
       token.audience = AUDIENCE
       token.expire_time = token_expire_at
+
       token[:access] = names.map do |name|
         { type: 'repository', name: name, actions: %w(*) }
       end
+      
       token.encoded
     end
 
diff --git a/app/services/create_branch_service.rb b/app/services/create_branch_service.rb
index cc128563437..d874582d54f 100644
--- a/app/services/create_branch_service.rb
+++ b/app/services/create_branch_service.rb
@@ -3,17 +3,20 @@ require_relative 'base_service'
 class CreateBranchService < BaseService
   def execute(branch_name, ref, source_project: @project)
     valid_branch = Gitlab::GitRefValidator.validate(branch_name)
-    if valid_branch == false
+
+    unless valid_branch
       return error('Branch name is invalid')
     end
 
     repository = project.repository
     existing_branch = repository.find_branch(branch_name)
+
     if existing_branch
       return error('Branch already exists')
     end
 
     new_branch = nil
+
     if source_project != @project
       repository.with_tmp_ref do |tmp_ref|
         repository.fetch_ref(
@@ -29,7 +32,6 @@ class CreateBranchService < BaseService
     end
 
     if new_branch
-      # GitPushService handles execution of services and hooks for branch pushes
       success(new_branch)
     else
       error('Invalid reference name')
@@ -39,8 +41,6 @@ class CreateBranchService < BaseService
   end
 
   def success(branch)
-    out = super()
-    out[:branch] = branch
-    out
+    super().merge(branch: branch)
   end
 end
diff --git a/app/services/create_release_service.rb b/app/services/create_release_service.rb
index f029db72d40..d6d4afcf29a 100644
--- a/app/services/create_release_service.rb
+++ b/app/services/create_release_service.rb
@@ -23,8 +23,6 @@ class CreateReleaseService < BaseService
   end
 
   def success(release)
-    out = super()
-    out[:release] = release
-    out
+    super().merge(release: release)
   end
 end
diff --git a/app/services/create_snippet_service.rb b/app/services/create_snippet_service.rb
index 9884cb96661..95cc9baf406 100644
--- a/app/services/create_snippet_service.rb
+++ b/app/services/create_snippet_service.rb
@@ -1,10 +1,10 @@
 class CreateSnippetService < BaseService
   def execute
-    if project.nil?
-      snippet = PersonalSnippet.new(params)
-    else
-      snippet = project.snippets.build(params)
-    end
+    snippet = if project
+                project.snippets.build(params)
+              else
+                PersonalSnippet.new(params)
+              end
 
     unless Gitlab::VisibilityLevel.allowed_for?(current_user, params[:visibility_level])
       deny_visibility_level(snippet)
diff --git a/app/services/create_tag_service.rb b/app/services/create_tag_service.rb
index bd8d982e1fb..c0e7ecf6a96 100644
--- a/app/services/create_tag_service.rb
+++ b/app/services/create_tag_service.rb
@@ -9,6 +9,7 @@ class CreateTagService < BaseService
     message.strip! if message
 
     new_tag = nil
+
     begin
       new_tag = repository.add_tag(current_user, tag_name, target, message)
     rescue Rugged::TagError
@@ -22,6 +23,7 @@ class CreateTagService < BaseService
         CreateReleaseService.new(@project, @current_user).
           execute(tag_name, release_description)
       end
+      
       success.merge(tag: new_tag)
     else
       error("Target #{target} is invalid")
diff --git a/app/services/delete_branch_service.rb b/app/services/delete_branch_service.rb
index 752a7029952..332c55581a1 100644
--- a/app/services/delete_branch_service.rb
+++ b/app/services/delete_branch_service.rb
@@ -5,7 +5,6 @@ class DeleteBranchService < BaseService
     repository = project.repository
     branch = repository.find_branch(branch_name)
 
-    # No such branch
     unless branch
       return error('No such branch', 404)
     end
@@ -14,18 +13,15 @@ class DeleteBranchService < BaseService
       return error('Cannot remove HEAD branch', 405)
     end
 
-    # Dont allow remove of protected branch
     if project.protected_branch?(branch_name)
       return error('Protected branch cant be removed', 405)
     end
 
-    # Dont allow user to remove branch if he is not allowed to push
     unless current_user.can?(:push_code, project)
       return error('You dont have push access to repo', 405)
     end
 
     if repository.rm_branch(current_user, branch_name)
-      # GitPushService handles execution of services and hooks for branch pushes
       success('Branch was removed')
     else
       error('Failed to remove branch')
@@ -35,15 +31,11 @@ class DeleteBranchService < BaseService
   end
 
   def error(message, return_code = 400)
-    out = super(message)
-    out[:return_code] = return_code
-    out
+    super(message).merge(return_code: return_code)
   end
 
   def success(message)
-    out = super()
-    out[:message] = message
-    out
+    super().merge(message: message)
   end
 
   def build_push_data(branch)
diff --git a/app/services/delete_tag_service.rb b/app/services/delete_tag_service.rb
index de3352a6756..1e41fbe34b6 100644
--- a/app/services/delete_tag_service.rb
+++ b/app/services/delete_tag_service.rb
@@ -5,7 +5,6 @@ class DeleteTagService < BaseService
     repository = project.repository
     tag = repository.find_tag(tag_name)
 
-    # No such tag
     unless tag
       return error('No such tag', 404)
     end
@@ -26,15 +25,11 @@ class DeleteTagService < BaseService
   end
 
   def error(message, return_code = 400)
-    out = super(message)
-    out[:return_code] = return_code
-    out
+    super(message).merge(return_code: return_code)
   end
 
   def success(message)
-    out = super()
-    out[:message] = message
-    out
+    super().merge(message: message)
   end
 
   def build_push_data(tag)
diff --git a/app/services/files/base_service.rb b/app/services/files/base_service.rb
index 4bdb68a3698..37c5e321b39 100644
--- a/app/services/files/base_service.rb
+++ b/app/services/files/base_service.rb
@@ -15,7 +15,6 @@ module Files
                           params[:file_content]
                         end
 
-      # Validate parameters
       validate
 
       # Create new branch if it different from source_branch
@@ -26,7 +25,7 @@ module Files
       if commit
         success
       else
-        error("Something went wrong. Your changes were not committed")
+        error('Something went wrong. Your changes were not committed')
       end
     rescue Repository::CommitError, Gitlab::Git::Repository::InvalidBlobName, GitHooksService::PreReceiveError, ValidationError => ex
       error(ex.message)
@@ -51,12 +50,12 @@ module Files
 
       unless project.empty_repo?
         unless @source_project.repository.branch_names.include?(@source_branch)
-          raise_error("You can only create or edit files when you are on a branch")
+          raise_error('You can only create or edit files when you are on a branch')
         end
 
         if different_branch?
           if repository.branch_names.include?(@target_branch)
-            raise_error("Branch with such name already exists. You need to switch to this branch in order to make changes")
+            raise_error('Branch with such name already exists. You need to switch to this branch in order to make changes')
           end
         end
       end
diff --git a/app/services/files/create_service.rb b/app/services/files/create_service.rb
index e4cde4a2fd8..8eaf6db8012 100644
--- a/app/services/files/create_service.rb
+++ b/app/services/files/create_service.rb
@@ -29,7 +29,7 @@ module Files
         blob = repository.blob_at_branch(@source_branch, @file_path)
 
         if blob
-          raise_error("Your changes could not be committed because a file with the same name already exists")
+          raise_error('Your changes could not be committed because a file with the same name already exists')
         end
       end
     end
diff --git a/app/services/git_tag_push_service.rb b/app/services/git_tag_push_service.rb
index 299a0a967b0..58573078048 100644
--- a/app/services/git_tag_push_service.rb
+++ b/app/services/git_tag_push_service.rb
@@ -26,6 +26,7 @@ class GitTagPushService < BaseService
     unless Gitlab::Git.blank_ref?(params[:newrev])
       tag_name = Gitlab::Git.ref_name(params[:ref])
       tag = project.repository.find_tag(tag_name)
+      
       if tag && tag.target == params[:newrev]
         commit = project.commit(tag.target)
         commits = [commit].compact
diff --git a/app/services/issues/bulk_update_service.rb b/app/services/issues/bulk_update_service.rb
index 15825b81685..cd08c3a0cb9 100644
--- a/app/services/issues/bulk_update_service.rb
+++ b/app/services/issues/bulk_update_service.rb
@@ -9,6 +9,7 @@ module Issues
       end
 
       issues = Issue.where(id: issues_ids)
+
       issues.each do |issue|
         next unless can?(current_user, :update_issue, issue)
 
diff --git a/app/services/merge_requests/merge_service.rb b/app/services/merge_requests/merge_service.rb
index 3bec66cea88..f1b1d90c457 100644
--- a/app/services/merge_requests/merge_service.rb
+++ b/app/services/merge_requests/merge_service.rb
@@ -34,7 +34,7 @@ module MergeRequests
         committer: committer
       }
 
-      commit_id = repository.merge(current_user, merge_request.source_sha, merge_request.target_branch, options)
+      commit_id = repository.merge(current_user, merge_request.diff_head_sha, merge_request.target_branch, options)
       merge_request.update(merge_commit_sha: commit_id)
     rescue GitHooksService::PreReceiveError => e
       merge_request.update(merge_error: e.message)
diff --git a/app/services/merge_requests/merge_when_build_succeeds_service.rb b/app/services/merge_requests/merge_when_build_succeeds_service.rb
index 870f5705184..4ad5fb08311 100644
--- a/app/services/merge_requests/merge_when_build_succeeds_service.rb
+++ b/app/services/merge_requests/merge_when_build_succeeds_service.rb
@@ -12,7 +12,7 @@ module MergeRequests
         merge_request.merge_when_build_succeeds = true
         merge_request.merge_user                = @current_user
 
-        SystemNoteService.merge_when_build_succeeds(merge_request, @project, @current_user, merge_request.last_commit)
+        SystemNoteService.merge_when_build_succeeds(merge_request, @project, @current_user, merge_request.diff_head_commit)
       end
 
       merge_request.save
diff --git a/app/services/merge_requests/post_merge_service.rb b/app/services/merge_requests/post_merge_service.rb
index 064910f81f7..8437d9b8b43 100644
--- a/app/services/merge_requests/post_merge_service.rb
+++ b/app/services/merge_requests/post_merge_service.rb
@@ -20,6 +20,7 @@ module MergeRequests
       return unless merge_request.target_branch == project.default_branch
 
       closed_issues = merge_request.closes_issues(current_user)
+
       closed_issues.each do |issue|
         if can?(current_user, :update_issue, issue)
           Issues::CloseService.new(project, current_user, {}).execute(issue, commit: merge_request)
diff --git a/app/services/merge_requests/refresh_service.rb b/app/services/merge_requests/refresh_service.rb
index fe0579744b4..21490ac77ea 100644
--- a/app/services/merge_requests/refresh_service.rb
+++ b/app/services/merge_requests/refresh_service.rb
@@ -34,10 +34,10 @@ module MergeRequests
     def close_merge_requests
       commit_ids = @commits.map(&:id)
       merge_requests = @project.merge_requests.opened.where(target_branch: @branch_name).to_a
-      merge_requests = merge_requests.select(&:last_commit)
+      merge_requests = merge_requests.select(&:diff_head_commit)
 
       merge_requests = merge_requests.select do |merge_request|
-        commit_ids.include?(merge_request.last_commit.id)
+        commit_ids.include?(merge_request.diff_head_sha)
       end
 
       merge_requests.uniq.select(&:source_project).each do |merge_request|
@@ -60,7 +60,7 @@ module MergeRequests
 
       merge_requests.each do |merge_request|
         if merge_request.source_branch == @branch_name || force_push?
-          merge_request.reload_code
+          merge_request.reload_diff
           merge_request.mark_as_unchecked
         else
           mr_commit_ids = merge_request.commits.map(&:id)
@@ -68,7 +68,7 @@ module MergeRequests
           matches = mr_commit_ids & push_commit_ids
 
           if matches.any?
-            merge_request.reload_code
+            merge_request.reload_diff
             merge_request.mark_as_unchecked
           else
             merge_request.mark_as_unchecked
@@ -94,12 +94,10 @@ module MergeRequests
         merge_request = merge_requests_for_source_branch.first
         return unless merge_request
 
-        last_commit = merge_request.last_commit
-
         begin
           # Since any number of commits could have been made to the restored branch,
           # find the common root to see what has been added.
-          common_ref = @project.repository.merge_base(last_commit.id, @newrev)
+          common_ref = @project.repository.merge_base(merge_request.diff_head_sha, @newrev)
           # If the a commit no longer exists in this repo, gitlab_git throws
           # a Rugged::OdbError. This is fixed in https://gitlab.com/gitlab-org/gitlab_git/merge_requests/52
           @commits = @project.repository.commits_between(common_ref, @newrev) if common_ref
diff --git a/app/services/merge_requests/reopen_service.rb b/app/services/merge_requests/reopen_service.rb
index 8279ad2001b..eb88ae9d11c 100644
--- a/app/services/merge_requests/reopen_service.rb
+++ b/app/services/merge_requests/reopen_service.rb
@@ -6,7 +6,7 @@ module MergeRequests
         create_note(merge_request)
         notification_service.reopen_mr(merge_request, current_user)
         execute_hooks(merge_request, 'reopen')
-        merge_request.reload_code
+        merge_request.reload_diff
         merge_request.mark_as_unchecked
       end
 
diff --git a/app/services/notes/diff_position_update_service.rb b/app/services/notes/diff_position_update_service.rb
new file mode 100644
index 00000000000..0cb731f5bc3
--- /dev/null
+++ b/app/services/notes/diff_position_update_service.rb
@@ -0,0 +1,30 @@
+module Notes
+  class DiffPositionUpdateService < BaseService
+    def execute(note)
+      new_position = tracer.trace(note.position)
+
+      # Don't update the position if the type doesn't match, since that means
+      # the diff line commented on was changed, and the comment is now outdated
+      old_position = note.position
+      if new_position &&
+          new_position != old_position &&
+          new_position.type == old_position.type
+
+        note.position = new_position
+      end
+
+      note
+    end
+
+    private
+
+    def tracer
+      @tracer ||= Gitlab::Diff::PositionTracer.new(
+        repository: project.repository,
+        old_diff_refs: params[:old_diff_refs],
+        new_diff_refs: params[:new_diff_refs],
+        paths: params[:paths]
+      )
+    end
+  end
+end
diff --git a/app/services/notification_service.rb b/app/services/notification_service.rb
index 590350a11e5..ab6e51209ee 100644
--- a/app/services/notification_service.rb
+++ b/app/services/notification_service.rb
@@ -153,6 +153,7 @@ class NotificationService
       else
         mentioned_users
       end
+
     recipients = recipients.concat(participants)
 
     # Merge project watchers
@@ -176,6 +177,7 @@ class NotificationService
 
     # build notify method like 'note_commit_email'
     notify_method = "note_#{note.noteable_type.underscore}_email".to_sym
+    
     recipients.each do |recipient|
       mailer.send(notify_method, recipient.id, note.id).deliver_later
     end
diff --git a/app/services/projects/housekeeping_service.rb b/app/services/projects/housekeeping_service.rb
index a47df22f1ba..752c11d7ae6 100644
--- a/app/services/projects/housekeeping_service.rb
+++ b/app/services/projects/housekeeping_service.rb
@@ -27,7 +27,7 @@ module Projects
       GitlabShellOneShotWorker.perform_async(:gc, @project.repository_storage_path, @project.path_with_namespace)
     ensure
       Gitlab::Metrics.measure(:reset_pushes_since_gc) do
-        @project.update_column(:pushes_since_gc, 0)
+        update_pushes_since_gc(0)
       end
     end
 
@@ -37,12 +37,18 @@ module Projects
 
     def increment!
       Gitlab::Metrics.measure(:increment_pushes_since_gc) do
-        @project.increment!(:pushes_since_gc)
+        update_pushes_since_gc(@project.pushes_since_gc + 1)
       end
     end
 
     private
 
+    def update_pushes_since_gc(new_value)
+      if Gitlab::ExclusiveLease.new("project_housekeeping:update_pushes_since_gc:#{project.id}", timeout: 60).try_obtain
+        @project.update_column(:pushes_since_gc, new_value)
+      end
+    end
+
     def try_obtain_lease
       Gitlab::Metrics.measure(:obtain_housekeeping_lease) do
         lease = ::Gitlab::ExclusiveLease.new("project_housekeeping:#{@project.id}", timeout: LEASE_TIMEOUT)
diff --git a/app/services/projects/import_export/export_service.rb b/app/services/projects/import_export/export_service.rb
index 3f507d5c400..6afc048576d 100644
--- a/app/services/projects/import_export/export_service.rb
+++ b/app/services/projects/import_export/export_service.rb
@@ -38,6 +38,8 @@ module Projects
       end
 
       def cleanup_and_notify
+        Rails.logger.error("Import/Export - Project #{project.name} with ID: #{project.id} export error - #{@shared.errors.join(', ')}")
+
         FileUtils.rm_rf(@shared.export_path)
 
         notify_error
@@ -45,6 +47,8 @@ module Projects
       end
 
       def notify_success
+        Rails.logger.info("Import/Export - Project #{project.name} with ID: #{project.id} successfully exported")
+
         notification_service.project_exported(@project, @current_user)
       end
 
diff --git a/app/services/projects/update_service.rb b/app/services/projects/update_service.rb
index 941df08995c..f06311511cc 100644
--- a/app/services/projects/update_service.rb
+++ b/app/services/projects/update_service.rb
@@ -3,10 +3,11 @@ module Projects
     def execute
       # check that user is allowed to set specified visibility_level
       new_visibility = params[:visibility_level]
+      
       if new_visibility && new_visibility.to_i != project.visibility_level
         unless can?(current_user, :change_visibility_level, project) &&
           Gitlab::VisibilityLevel.allowed_for?(current_user, new_visibility)
-          
+
           deny_visibility_level(project, new_visibility)
           return project
         end
diff --git a/app/services/system_note_service.rb b/app/services/system_note_service.rb
index b868d2e7e83..1ab3b5789bc 100644
--- a/app/services/system_note_service.rb
+++ b/app/services/system_note_service.rb
@@ -82,7 +82,7 @@ class SystemNoteService
     end
 
     body << ' ' << 'label'.pluralize(labels_count)
-    body = "#{body.capitalize}"
+    body = body.capitalize
 
     create_note(noteable: noteable, project: project, author: author, note: body)
   end
@@ -125,7 +125,7 @@ class SystemNoteService
   # Returns the created Note object
   def self.change_status(noteable, project, author, status, source)
     body = "Status changed to #{status}"
-    body += " by #{source.gfm_reference(project)}" if source
+    body << " by #{source.gfm_reference(project)}" if source
 
     create_note(noteable: noteable, project: project, author: author, note: body)
   end
@@ -139,7 +139,7 @@ class SystemNoteService
 
   # Called when 'merge when build succeeds' is canceled
   def self.cancel_merge_when_build_succeeds(noteable, project, author)
-    body = "Canceled the automatic merge"
+    body = 'Canceled the automatic merge'
 
     create_note(noteable: noteable, project: project, author: author, note: body)
   end
@@ -236,6 +236,7 @@ class SystemNoteService
       else
         'deleted'
       end
+
     body = "#{verb} #{branch_type.to_s} branch `#{branch}`".capitalize
     create_note(noteable: noteable, project: project, author: author, note: body)
   end
diff --git a/app/services/update_release_service.rb b/app/services/update_release_service.rb
index 0c0f68d169b..0ee1ff2d7d9 100644
--- a/app/services/update_release_service.rb
+++ b/app/services/update_release_service.rb
@@ -21,8 +21,6 @@ class UpdateReleaseService < BaseService
   end
 
   def success(release)
-    out = super()
-    out[:release] = release
-    out
+    super().merge(release: release)
   end
 end
diff --git a/app/services/update_snippet_service.rb b/app/services/update_snippet_service.rb
index 93af8f21972..a6bb36821c3 100644
--- a/app/services/update_snippet_service.rb
+++ b/app/services/update_snippet_service.rb
@@ -9,6 +9,7 @@ class UpdateSnippetService < BaseService
   def execute
     # check that user is allowed to set specified visibility_level
     new_visibility = params[:visibility_level]
+    
     if new_visibility && new_visibility.to_i != snippet.visibility_level
       unless Gitlab::VisibilityLevel.allowed_for?(current_user, new_visibility)
         deny_visibility_level(snippet, new_visibility)
diff --git a/app/validators/addressable_url_validator.rb b/app/validators/addressable_url_validator.rb
new file mode 100644
index 00000000000..09bfa613cbe
--- /dev/null
+++ b/app/validators/addressable_url_validator.rb
@@ -0,0 +1,45 @@
+# AddressableUrlValidator
+#
+# Custom validator for URLs. This is a stricter version of UrlValidator - it also checks
+# for using the right protocol, but it actually parses the URL checking for any syntax errors.
+# The regex is also different from `URI` as we use `Addressable::URI` here.
+#
+# By default, only URLs for http, https, ssh, and git protocols will be considered valid.
+# Provide a `:protocols` option to configure accepted protocols.
+#
+# Example:
+#
+#   class User < ActiveRecord::Base
+#     validates :personal_url, addressable_url: true
+#
+#     validates :ftp_url, addressable_url: { protocols: %w(ftp) }
+#
+#     validates :git_url, addressable_url: { protocols: %w(http https ssh git) }
+#   end
+#
+class AddressableUrlValidator < ActiveModel::EachValidator
+  DEFAULT_OPTIONS = { protocols: %w(http https ssh git) }
+
+  def validate_each(record, attribute, value)
+    unless valid_url?(value)
+      record.errors.add(attribute, "must be a valid URL")
+    end
+  end
+
+  private
+
+  def valid_url?(value)
+    return false unless value
+
+    valid_protocol?(value) && valid_uri?(value)
+  end
+
+  def valid_uri?(value)
+    Gitlab::UrlSanitizer.valid?(value)
+  end
+
+  def valid_protocol?(value)
+    options = DEFAULT_OPTIONS.merge(self.options)
+    value =~ /\A#{URI.regexp(options[:protocols])}\z/
+  end
+end
diff --git a/app/views/admin/groups/_group.html.haml b/app/views/admin/groups/_group.html.haml
index 9025aaac097..59fd6c3fea0 100644
--- a/app/views/admin/groups/_group.html.haml
+++ b/app/views/admin/groups/_group.html.haml
@@ -1,28 +1,20 @@
 - css_class = '' unless local_assigns[:css_class]
-- css_class += ' no-description' if group.description.blank?
 
-%li.group-row{ class: css_class }
-  .controls.hidden-xs
-    = link_to 'Edit', edit_admin_group_path(group), id: "edit_#{dom_id(group)}", class: 'btn btn-grouped btn-sm'
-    = link_to 'Destroy', [:admin, group], data: {confirm: "REMOVE #{group.name}? Are you sure?"}, method: :delete, class: 'btn btn-grouped btn-sm btn-remove'
+%li.group-row.group-admin{ class: css_class }
+  .group-avatar
+    = image_tag group_icon(group), class: 'avatar hidden-xs'
+  .group-details
+    .title
+      = link_to [:admin, group], class: 'group-name' do
+        = group.name
+    .group-stats
+      %span>= pluralize(number_with_delimiter(group.projects.count), 'project')
+      ,
+      %span= pluralize(number_with_delimiter(group.users.count), 'member')
 
-  .stats
-    %span
-      = icon('bookmark')
-      = number_with_delimiter(group.projects.count)
-
-    %span
-      = icon('users')
-      = number_with_delimiter(group.users.count)
-
-    %span.visibility-icon.has-tooltip{data: { container: 'body', placement: 'left' }, title: visibility_icon_description(group)}
-      = visibility_level_icon(group.visibility_level, fw: false)
-
-  = image_tag group_icon(group), class: 'avatar s40 hidden-xs'
-  .title
-    = link_to [:admin, group], class: 'group-name' do
-      = group.name
-
-  - if group.description.present?
-    .description
-      = markdown(group.description, pipeline: :description)
+    - if group.description.present?
+      .description
+        = markdown(group.description, pipeline: :description)
+  .group-controls.hidden-xs
+    = link_to 'Edit', edit_admin_group_path(group), id: "edit_#{dom_id(group)}", class: 'btn'
+    = link_to 'Delete', [:admin, group], data: { confirm: "Are you sure you want to remove #{group.name}?" }, method: :delete, class: 'btn btn-remove'
diff --git a/app/views/admin/groups/index.html.haml b/app/views/admin/groups/index.html.haml
index 94aa5f5a942..794f910a61f 100644
--- a/app/views/admin/groups/index.html.haml
+++ b/app/views/admin/groups/index.html.haml
@@ -3,41 +3,32 @@
 = render "admin/dashboard/head"
 
 %div{ class: container_class }
-  %h3.page-title
-    Groups (#{number_with_delimiter(@groups.total_count)})
-
-  %p.light
-    Group allows you to keep projects organized.
-    Use groups for uniting related projects.
-
   .top-area
-    .nav-search
-      = form_tag admin_groups_path, method: :get, class: 'form-inline' do
+    .prepend-top-default.append-bottom-default
+      = form_tag admin_groups_path, method: :get, class: 'js-search-form' do |f|
         = hidden_field_tag :sort, @sort
-        = text_field_tag :name, params[:name], class: "form-control"
-        = button_tag "Search", class: "btn submit btn-primary"
-
-    .nav-controls
-      .dropdown.inline
-        %a.dropdown-toggle.btn{href: '#', "data-toggle" => "dropdown"}
-          %span.light
-          - if @sort.present?
-            = sort_options_hash[@sort]
-          - else
-            = sort_title_recently_created
-          %b.caret
-        %ul.dropdown-menu
-          %li
-            = link_to admin_groups_path(sort: sort_value_recently_created) do
-              = sort_title_recently_created
-            = link_to admin_groups_path(sort: sort_value_oldest_created) do
-              = sort_title_oldest_created
-            = link_to admin_groups_path(sort: sort_value_recently_updated) do
-              = sort_title_recently_updated
-            = link_to admin_groups_path(sort: sort_value_oldest_updated) do
-              = sort_title_oldest_updated
-      = link_to 'New Group', new_admin_group_path, class: "btn btn-new"
-
+        .search-holder
+          - project_name = params[:name].present? ? params[:name] : nil
+          .search-field-holder
+            = search_field_tag :name, project_name, class: "form-control search-text-input js-search-input", autofocus: true, spellcheck: false, placeholder: 'Search by name'
+            = icon("search", class: "search-icon")
+          .dropdown
+            - toggle_text = @sort.present? ? sort_options_hash[@sort] : sort_title_recently_created
+            = dropdown_toggle(toggle_text, { toggle: 'dropdown' })
+            %ul.dropdown-menu.dropdown-menu-align-right
+              %li.dropdown-header
+                Sort by
+              %li
+                = link_to admin_groups_path(sort: sort_value_recently_created, name: project_name) do
+                  = sort_title_recently_created
+                = link_to admin_groups_path(sort: sort_value_oldest_created, name: project_name) do
+                  = sort_title_oldest_created
+                = link_to admin_groups_path(sort: sort_value_recently_updated, name: project_name) do
+                  = sort_title_recently_updated
+                = link_to admin_groups_path(sort: sort_value_oldest_updated, name: project_name) do
+                  = sort_title_oldest_updated
+          = link_to new_admin_group_path, class: "btn btn-new" do
+            New Group
   %ul.content-list
     = render @groups
 
diff --git a/app/views/admin/projects/index.html.haml b/app/views/admin/projects/index.html.haml
index 7d2eb423223..7fbce25b2c4 100644
--- a/app/views/admin/projects/index.html.haml
+++ b/app/views/admin/projects/index.html.haml
@@ -1,97 +1,94 @@
 - @no_container = true
 - page_title "Projects"
-= render 'shared/show_aside'
+- params[:visibility_level] ||= []
+
 = render "admin/dashboard/head"
 
 %div{ class: container_class }
-  .row.prepend-top-default
-    %aside.col-md-3
-      .panel.admin-filter
-        = form_tag admin_namespaces_projects_path, method: :get, class: '' do
-          .form-group
-            = label_tag :name, 'Name:'
-            = text_field_tag :name, params[:name], class: "form-control"
+  .top-area
+    .prepend-top-default
+      = form_tag admin_namespaces_projects_path, method: :get do |f|
+        .search-holder
+          .search-field-holder
+            = search_field_tag :name, params[:name], class: "form-control search-text-input js-search-input", id: "dashboard_search", autofocus: true, spellcheck: false, placeholder: 'Search by name'
+
+            - if params[:visibility_level].present?
+              = hidden_field_tag 'visibility_level', params[:visibility_level]
+
+            - if params[:sort].present?
+              = hidden_field_tag 'sort', params[:sort]
+
+            - if params[:personal].present?
+              = hidden_field_tag 'visibility_level', 'true'
+
+            - if params[:archived].present?
+              = hidden_field_tag 'archived', 'true'
+
+            = icon("search", class: "search-icon")
+
+          .dropdown
+            - toggle_text = 'Search for Namespace'
+            - if params[:namespace_id].present?
+              - namespace = Namespace.find(params[:namespace_id])
+              - toggle_text = "#{namespace.kind}: #{namespace.path}"
+            = dropdown_toggle(toggle_text, { toggle: 'dropdown' }, { toggle_class: 'js-namespace-select large' })
+            .dropdown-menu.dropdown-select.dropdown-menu-align-right
+              = dropdown_title('Namespaces')
+              = dropdown_filter("Search for Namespace")
+              = dropdown_content
+              = dropdown_loading
+
+          = button_tag "Search", class: "btn btn-primary btn-search"
+
+    %ul.nav-links
+      - opts = params[:visibility_level].present? ? {} : { page: admin_namespaces_projects_path }
+      = nav_link(opts) do
+        = link_to admin_namespaces_projects_path do
+          All
 
-          .form-group
-            = label_tag :namespace_id, "Namespace"
-            = namespace_select_tag :namespace_id, selected: params[:namespace_id], class: 'input-large'
+      = nav_link(html_options: { class: params[:visibility_level] == Gitlab::VisibilityLevel::PRIVATE.to_s ? 'active' : '' }) do
+        = link_to admin_namespaces_projects_path(visibility_level: Gitlab::VisibilityLevel::PRIVATE) do
+          Private
+      = nav_link(html_options: { class: params[:visibility_level] == Gitlab::VisibilityLevel::INTERNAL.to_s ? 'active' : '' }) do
+        = link_to admin_namespaces_projects_path(visibility_level: Gitlab::VisibilityLevel::INTERNAL) do
+          Internal
+      = nav_link(html_options: { class: params[:visibility_level] == Gitlab::VisibilityLevel::PUBLIC.to_s ? 'active' : '' }) do
+        = link_to admin_namespaces_projects_path(visibility_level: Gitlab::VisibilityLevel::PUBLIC) do
+          Public
 
-          .form-group
-            %strong Activity
-            .checkbox
-              = label_tag :with_push do
-                = check_box_tag :with_push, 1, params[:with_push]
-                %span Projects with push events
-            .checkbox
-              = label_tag :abandoned do
-                = check_box_tag :abandoned, 1, params[:abandoned]
-                %span No activity over 6 month
-            .checkbox
-              = label_tag :with_archived do
-                = check_box_tag :with_archived, 1, params[:with_archived]
-                %span Show archived projects
+    .nav-controls
+      = render 'shared/projects/dropdown'
+      = link_to new_project_path, class: 'btn btn-new' do
+        New Project
 
-          %fieldset
-            %strong Visibility level:
-            .visibility-levels
-              - Project.visibility_levels.each do |label, level|
-                .checkbox
-                  %label
-                    = check_box_tag 'visibility_levels[]', level, params[:visibility_levels].present? && params[:visibility_levels].include?(level.to_s)
-                    %span.descr
-                      = visibility_level_icon(level)
-                      = label
-          %fieldset
-            %strong Problems
-            .checkbox
-              = label_tag :last_repository_check_failed do
-                = check_box_tag :last_repository_check_failed, 1, params[:last_repository_check_failed]
-                %span Last repository check failed
+  .projects-list-holder
+    - if @projects.any?
+      %ul.projects-list.content-list
+        - @projects.each_with_index do |project|
+          %li.project-row
+            .controls.pull-right
+              - if project.archived
+                %span.label.label-warning archived
+              %span.label.label-gray
+                = repository_size(project)
+              = link_to 'Edit', edit_namespace_project_path(project.namespace, project), id: "edit_#{dom_id(project)}", class: "btn"
+              = link_to 'Delete', [project.namespace.becomes(Namespace), project], data: { confirm: remove_project_message(project) }, method: :delete, class: "btn btn-remove"
+            .title
+              = link_to [:admin, project.namespace.becomes(Namespace), project] do
+                .dash-project-avatar
+                  = project_icon(project, alt: '', class: 'avatar project-avatar s40')
+                %span.project-full-name
+                  %span.namespace-name
+                    - if project.namespace
+                      = project.namespace.human_name
+                      \/
+                  %span.project-name.filter-title
+                    = project.name
 
-          = hidden_field_tag :sort, params[:sort]
-          = button_tag "Search", class: "btn submit btn-primary"
-          = link_to "Reset", admin_namespaces_projects_path, class: "btn btn-cancel"
+            - if project.description.present?
+              .description
+                = markdown(project.description, pipeline: :description)
 
-    %section.col-md-9
-      .panel.panel-default
-        .panel-heading
-          Projects (#{@projects.total_count})
-          .controls
-            .dropdown.inline
-              %button.dropdown-toggle.btn.btn-sm{type: 'button', 'data-toggle' => 'dropdown'}
-                %span.light
-                - if @sort.present?
-                  = sort_options_hash[@sort]
-                - else
-                  = sort_title_recently_created
-                %b.caret
-              %ul.dropdown-menu
-                %li
-                  = link_to admin_namespaces_projects_path(sort: sort_value_recently_created) do
-                    = sort_title_recently_created
-                  = link_to admin_namespaces_projects_path(sort: sort_value_oldest_created) do
-                    = sort_title_oldest_created
-                  = link_to admin_namespaces_projects_path(sort: sort_value_recently_updated) do
-                    = sort_title_recently_updated
-                  = link_to admin_namespaces_projects_path(sort: sort_value_oldest_updated) do
-                    = sort_title_oldest_updated
-                  = link_to admin_namespaces_projects_path(sort: sort_value_largest_repo) do
-                    = sort_title_largest_repo
-            = link_to 'New Project', new_project_path, class: "btn btn-sm btn-success"
-        %ul.well-list
-          - @projects.each do |project|
-            %li
-              .list-item-name
-                %span{ class: visibility_level_color(project.visibility_level) }
-                  = visibility_level_icon(project.visibility_level)
-                = link_to project.name_with_namespace, [:admin, project.namespace.becomes(Namespace), project]
-              .pull-right
-                - if project.archived
-                  %span.label.label-warning archived
-                %span.label.label-gray
-                  = repository_size(project)
-                = link_to 'Edit', edit_namespace_project_path(project.namespace, project), id: "edit_#{dom_id(project)}", class: "btn btn-sm"
-                = link_to 'Destroy', [project.namespace.becomes(Namespace), project], data: { confirm: remove_project_message(project) }, method: :delete, class: "btn btn-sm btn-remove"
-          - if @projects.blank?
-            .nothing-here-block 0 projects matches
-      = paginate @projects, theme: "gitlab"
+      = paginate @projects, theme: 'gitlab'
+    - else
+      .nothing-here-block No projects found
diff --git a/app/views/admin/projects/show.html.haml b/app/views/admin/projects/show.html.haml
index 82d3169c6f9..2c5aba71699 100644
--- a/app/views/admin/projects/show.html.haml
+++ b/app/views/admin/projects/show.html.haml
@@ -99,7 +99,13 @@
           .form-group
             = f.label :new_namespace_id, "Namespace", class: 'control-label'
             .col-sm-10
-              = namespace_select_tag :new_namespace_id, selected: params[:namespace_id], class: 'input-large'
+              .dropdown
+                = dropdown_toggle('Search for Namespace', { toggle: 'dropdown', field_name: 'new_namespace_id', show_any: 'false' }, { toggle_class: 'js-namespace-select large' })
+                .dropdown-menu.dropdown-select
+                  = dropdown_title('Namespaces')
+                  = dropdown_filter("Search for Namespace")
+                  = dropdown_content
+                  = dropdown_loading
 
           .form-group
             .col-sm-offset-2.col-sm-10
diff --git a/app/views/admin/users/_user.html.haml b/app/views/admin/users/_user.html.haml
new file mode 100644
index 00000000000..d3519f616f6
--- /dev/null
+++ b/app/views/admin/users/_user.html.haml
@@ -0,0 +1,42 @@
+%li.user-row
+  .user-avatar
+    = image_tag avatar_icon(user), class: "avatar", alt: ''
+  .user-details
+    .user-name
+      = link_to user.name, [:admin, user]
+    - if user.blocked?
+      %span.label.label-danger blocked
+    - if user.admin?
+      %span.label.label-success Admin
+    - if user.external?
+      %span.label.label-default External
+    - if user == current_user
+      %span It's you!
+    .user-email
+      = mail_to user.email, user.email
+  .controls.pull-right
+    = link_to 'Edit', edit_admin_user_path(user), id: "edit_#{dom_id(user)}", class: 'btn'
+    - unless user == current_user
+      .dropdown.inline
+        %a.dropdown-new.btn.btn-default#project-settings-button{href: '#', data: { toggle: 'dropdown' } }
+          = icon('cog')
+          = icon('caret-down')
+        %ul.dropdown-menu.dropdown-menu-align-right
+          %li.dropdown-header
+            Settings
+            %li
+              - if user.ldap_blocked?
+                %span.small Cannot unblock LDAP blocked users
+              - elsif user.blocked?
+                = link_to 'Unblock', unblock_admin_user_path(user), method: :put
+              - else
+                = link_to 'Block', block_admin_user_path(user), data: { confirm: 'USER WILL BE BLOCKED! Are you sure?' }, method: :put
+            - if user.access_locked?
+              %li
+                = link_to 'Unlock', unlock_admin_user_path(user), method: :put, class: 'btn-grouped btn btn-xs btn-success', data: { confirm: 'Are you sure?' }
+          - if user.can_be_removed?
+            %li.divider
+            %li
+              = link_to 'Delete User', [:admin, user], data: { confirm: "USER #{user.name} WILL BE REMOVED! All issues, merge requests and groups linked to this user will also be removed! Consider cancelling this deletion and blocking the user instead. Are you sure?" },
+                                                   class: 'btn btn-remove btn-block',
+                                                   method: :delete
diff --git a/app/views/admin/users/index.html.haml b/app/views/admin/users/index.html.haml
index 21bb99a792c..357123c2c13 100644
--- a/app/views/admin/users/index.html.haml
+++ b/app/views/admin/users/index.html.haml
@@ -1,110 +1,78 @@
 - @no_container = true
 - page_title "Users"
-= render 'shared/show_aside'
 = render "admin/dashboard/head"
 
 %div{ class: container_class }
-  .admin-filter
-    %ul.nav-links
-      %li{class: "#{'active' unless params[:filter]}"}
-        = link_to admin_users_path do
-          Active
-          %small.badge= number_with_delimiter(User.active.count)
-      %li{class: "#{'active' if params[:filter] == "admins"}"}
-        = link_to admin_users_path(filter: "admins") do
-          Admins
-          %small.badge= number_with_delimiter(User.admins.count)
-      %li.filter-two-factor-enabled{class: "#{'active' if params[:filter] == 'two_factor_enabled'}"}
-        = link_to admin_users_path(filter: 'two_factor_enabled') do
-          2FA Enabled
-          %small.badge= number_with_delimiter(User.with_two_factor.count)
-      %li.filter-two-factor-disabled{class: "#{'active' if params[:filter] == 'two_factor_disabled'}"}
-        = link_to admin_users_path(filter: 'two_factor_disabled') do
-          2FA Disabled
-          %small.badge= number_with_delimiter(User.without_two_factor.count)
-      %li.filter-external{class: "#{'active' if params[:filter] == 'external'}"}
-        = link_to admin_users_path(filter: 'external') do
-          External
-          %small.badge= number_with_delimiter(User.external.count)
-      %li{class: "#{'active' if params[:filter] == "blocked"}"}
-        = link_to admin_users_path(filter: "blocked") do
-          Blocked
-          %small.badge= number_with_delimiter(User.blocked.count)
-      %li{class: "#{'active' if params[:filter] == "wop"}"}
-        = link_to admin_users_path(filter: "wop") do
-          Without projects
-          %small.badge= number_with_delimiter(User.without_projects.count)
+  .top-area
+    .prepend-top-default
+      = form_tag admin_users_path, method: :get do
+        - if params[:filter].present?
+          = hidden_field_tag "filter", h(params[:filter])
+        .search-holder
+          .search-field-holder
+            = search_field_tag :name, params[:name], placeholder: 'Search by name, email or username', class: 'form-control search-text-input js-search-input', spellcheck: false
+            = icon("search", class: "search-icon")
+          .dropdown
+            - toggle_text = if @sort.present? then sort_options_hash[@sort] else sort_title_name end
+            = dropdown_toggle(toggle_text, { toggle: 'dropdown' })
+            %ul.dropdown-menu.dropdown-menu-align-right
+              %li.dropdown-header
+                Sort by
+              %li
+                = link_to admin_users_path(sort: sort_value_name, filter: params[:filter]) do
+                  = sort_title_name
+                = link_to admin_users_path(sort: sort_value_recently_signin, filter: params[:filter]) do
+                  = sort_title_recently_signin
+                = link_to admin_users_path(sort: sort_value_oldest_signin, filter: params[:filter]) do
+                  = sort_title_oldest_signin
+                = link_to admin_users_path(sort: sort_value_recently_created, filter: params[:filter]) do
+                  = sort_title_recently_created
+                = link_to admin_users_path(sort: sort_value_oldest_created, filter: params[:filter]) do
+                  = sort_title_oldest_created
+                = link_to admin_users_path(sort: sort_value_recently_updated, filter: params[:filter]) do
+                  = sort_title_recently_updated
+                = link_to admin_users_path(sort: sort_value_oldest_updated, filter: params[:filter]) do
+                  = sort_title_oldest_updated
+          = link_to 'New User', new_admin_user_path, class: 'btn btn-new btn-search'
 
-    .row-content-block.second-block
-      .pull-right
-        .dropdown.inline
-          %a.dropdown-toggle.btn{href: '#', "data-toggle" => "dropdown"}
-            %span.light
-            - if @sort.present?
-              = sort_options_hash[@sort]
-            - else
-              = sort_title_name
-            %b.caret
-          %ul.dropdown-menu
-            %li
-              = link_to admin_users_path(sort: sort_value_name, filter: params[:filter]) do
-                = sort_title_name
-              = link_to admin_users_path(sort: sort_value_recently_signin, filter: params[:filter]) do
-                = sort_title_recently_signin
-              = link_to admin_users_path(sort: sort_value_oldest_signin, filter: params[:filter]) do
-                = sort_title_oldest_signin
-              = link_to admin_users_path(sort: sort_value_recently_created, filter: params[:filter]) do
-                = sort_title_recently_created
-              = link_to admin_users_path(sort: sort_value_oldest_created, filter: params[:filter]) do
-                = sort_title_oldest_created
-              = link_to admin_users_path(sort: sort_value_recently_updated, filter: params[:filter]) do
-                = sort_title_recently_updated
-              = link_to admin_users_path(sort: sort_value_oldest_updated, filter: params[:filter]) do
-                = sort_title_oldest_updated
+    .nav-block
+      %ul.nav-links.wide.scrolling-tabs.white.scrolling-tabs
+        .fade-left
+        = nav_link(html_options: { class: ('active' unless params[:filter]) }) do
+          = link_to admin_users_path do
+            Active
+            %small.badge= number_with_delimiter(User.active.count)
+        = nav_link(html_options: { class: ('active' if params[:filter] == 'admins') }) do
+          = link_to admin_users_path(filter: "admins") do
+            Admins
+            %small.badge= number_with_delimiter(User.admins.count)
+        = nav_link(html_options: { class: "#{'active' if params[:filter] == 'two_factor_enabled'} filter-two-factor-enabled" }) do
+          = link_to admin_users_path(filter: 'two_factor_enabled') do
+            2FA Enabled
+            %small.badge= number_with_delimiter(User.with_two_factor.count)
+        = nav_link(html_options: { class: "#{'active' if params[:filter] == 'two_factor_disabled'} filter-two-factor-disabled" }) do
+          = link_to admin_users_path(filter: 'two_factor_disabled') do
+            2FA Disabled
+            %small.badge= number_with_delimiter(User.without_two_factor.count)
+        = nav_link(html_options: { class: ('active' if params[:filter] == 'external') }) do
+          = link_to admin_users_path(filter: 'external') do
+            External
+            %small.badge= number_with_delimiter(User.external.count)
+        = nav_link(html_options: { class: ('active' if params[:filter] == 'blocked') }) do
+          = link_to admin_users_path(filter: "blocked") do
+            Blocked
+            %small.badge= number_with_delimiter(User.blocked.count)
+        = nav_link(html_options: { class: ('active' if params[:filter] == 'wop') }) do
+          = link_to admin_users_path(filter: "wop") do
+            Without projects
+            %small.badge= number_with_delimiter(User.without_projects.count)
+        .fade-right
 
-        = link_to 'New User', new_admin_user_path, class: "btn btn-new"
-      = form_tag admin_users_path, method: :get, class: 'form-inline' do
-        .form-group
-          = search_field_tag :name, params[:name], placeholder: 'Name, email or username', class: 'form-control', spellcheck: false
-          = hidden_field_tag "filter", params[:filter]
-        = button_tag class: 'btn btn-primary' do
-          %i.fa.fa-search
+  %ul.users-list.content-list
+    - if @users.empty?
+      %li
+        .nothing-here-block No users found.
+    - else
+      = render partial: 'admin/users/user', collection: @users
 
-
-  .panel.panel-default
-    %ul.well-list
-      - @users.each do |user|
-        %li
-          .list-item-name
-            - if user.blocked?
-              = icon("lock", class: "cred")
-            - else
-              = icon("user", class: "cgreen")
-            = link_to user.name, [:admin, user]
-            - if user.admin?
-              %strong.cred (Admin)
-            - if user.external?
-              %strong.cred (External)
-            - if user == current_user
-              %span.cred It's you!
-          .pull-right
-            %span.light
-              %i.fa.fa-envelope
-              = mail_to user.email, user.email, class: 'light'
-            &nbsp;
-            .pull-right
-              = link_to 'Edit', edit_admin_user_path(user), id: "edit_#{dom_id(user)}", class: 'btn-grouped btn btn-xs'
-              - unless user == current_user
-                - if user.ldap_blocked?
-                  = link_to '#', title: 'Cannot unblock LDAP blocked users', data: {toggle: 'tooltip'}, class: 'btn-grouped btn btn-xs btn-success disabled' do
-                    %i.fa.fa-lock
-                    Unblock
-                - elsif user.blocked?
-                  = link_to 'Unblock', unblock_admin_user_path(user), method: :put, class: 'btn-grouped btn btn-xs btn-success'
-                - else
-                  = link_to 'Block', block_admin_user_path(user), data: {confirm: 'USER WILL BE BLOCKED! Are you sure?'}, method: :put, class: 'btn-grouped btn btn-xs btn-warning'
-                - if user.access_locked?
-                  = link_to 'Unlock', unlock_admin_user_path(user), method: :put, class: 'btn-grouped btn btn-xs btn-success', data: { confirm: 'Are you sure?' }
-                - if user.can_be_removed?
-                  = link_to 'Destroy', [:admin, user], data: { confirm: "USER #{user.name} WILL BE REMOVED! All issues, merge requests and groups linked to this user will also be removed! Maybe block the user instead? Are you sure?" }, method: :delete, class: 'btn-grouped btn btn-xs btn-remove'
   = paginate @users, theme: "gitlab"
diff --git a/app/views/notify/note_merge_request_email.html.haml b/app/views/notify/note_merge_request_email.html.haml
index a3643a00cfe..35c4b862bb7 100644
--- a/app/views/notify/note_merge_request_email.html.haml
+++ b/app/views/notify/note_merge_request_email.html.haml
@@ -1,7 +1,7 @@
-- if @note.legacy_diff_note?
+- if @note.diff_note?
   %p.details
     New comment on diff for
-    = link_to @note.diff_file_path, @target_url
+    = link_to @note.diff_file.file_path, @target_url
     \:
 
 = render 'note_message'
diff --git a/app/views/notify/repository_push_email.html.haml b/app/views/notify/repository_push_email.html.haml
index f1532371b2e..c161ecc3463 100644
--- a/app/views/notify/repository_push_email.html.haml
+++ b/app/views/notify/repository_push_email.html.haml
@@ -72,12 +72,11 @@
             The diff for this file was not included because it is too large.
           - else
             %hr
-            - diff_commit = diff_file.deleted_file ? @message.diff_refs.first : @message.diff_refs.last
-            - blob = @message.project.repository.blob_for_diff(diff_commit, diff_file)
+            - blob = diff_file.blob
             - if blob && blob.respond_to?(:text?) && blob_text_viewable?(blob)
               %table.code.white
                 - diff_file.highlighted_diff_lines.each do |line|
-                  = render "projects/diffs/line", {line: line, diff_file: diff_file, line_code: nil, plain: true}
+                  = render "projects/diffs/line", line: line, diff_file: diff_file, plain: true
             - else
               No preview for this file type
           %br
diff --git a/app/views/projects/_last_push.html.haml b/app/views/projects/_last_push.html.haml
index 434d8644b83..3c6b931f41a 100644
--- a/app/views/projects/_last_push.html.haml
+++ b/app/views/projects/_last_push.html.haml
@@ -7,7 +7,9 @@
             %span You pushed to
             = link_to namespace_project_commits_path(event.project.namespace, event.project, event.ref_name) do
               %strong= event.ref_name
-            branch
+            - if @project && event.project != @project
+              %span at
+              %strong= link_to_project event.project
             #{time_ago_with_tooltip(event.created_at)}
 
           .pull-right
diff --git a/app/views/projects/blob/edit.html.haml b/app/views/projects/blob/edit.html.haml
index e4f04ca7764..b1c9895f43e 100644
--- a/app/views/projects/blob/edit.html.haml
+++ b/app/views/projects/blob/edit.html.haml
@@ -4,12 +4,10 @@
   %ul.nav-links.no-bottom.js-edit-mode
     %li.active
       = link_to '#editor' do
-        = icon('edit')
         Edit File
 
     %li
       = link_to '#preview', 'data-preview-url' => namespace_project_preview_blob_path(@project.namespace, @project, @id) do
-        = icon('eye')
         = editing_preview_title(@blob.name)
 
   = form_tag(namespace_project_update_blob_path(@project.namespace, @project, @id), method: :put, class: 'form-horizontal js-quick-submit js-requires-input js-edit-blob-form') do
diff --git a/app/views/projects/builds/show.html.haml b/app/views/projects/builds/show.html.haml
index d1c468c4692..4e801cc72fe 100644
--- a/app/views/projects/builds/show.html.haml
+++ b/app/views/projects/builds/show.html.haml
@@ -67,4 +67,4 @@
 = render "sidebar"
 
 :javascript
-  new CiBuild("#{namespace_project_build_url(@project.namespace, @project, @build, :json)}", "#{@build.status}", "#{trace_with_state[:state]}")
+  new CiBuild("#{namespace_project_build_url(@project.namespace, @project, @build)}", "#{namespace_project_build_url(@project.namespace, @project, @build, :json)}", "#{@build.status}", "#{trace_with_state[:state]}")
diff --git a/app/views/projects/commit/_ci_stage.html.haml b/app/views/projects/commit/_ci_stage.html.haml
index ae7bb01223e..9d925cacc0d 100644
--- a/app/views/projects/commit/_ci_stage.html.haml
+++ b/app/views/projects/commit/_ci_stage.html.haml
@@ -7,7 +7,7 @@
         = ci_icon_for_status(status)
       - if stage
         &nbsp;
-        = stage.titleize.pluralize
+        = stage.titleize
   = render statuses.latest.ordered, coverage: @project.build_coverage_enabled?, stage: false, ref: false, allow_retry: true
   = render statuses.retried.ordered, coverage: @project.build_coverage_enabled?, stage: false, ref: false, retried: true
   %tr
diff --git a/app/views/projects/commit/show.html.haml b/app/views/projects/commit/show.html.haml
index 401cb4f7e30..d0da2606587 100644
--- a/app/views/projects/commit/show.html.haml
+++ b/app/views/projects/commit/show.html.haml
@@ -7,8 +7,7 @@
   = render "ci_menu"
 - else
   %div.block-connector
-= render "projects/diffs/diffs", diffs: @diffs, project: @project,
-         diff_refs: @diff_refs
+= render "projects/diffs/diffs", diffs: @diffs, project: @project, diff_refs: @commit.diff_refs
 = render "projects/notes/notes_with_form"
 - if can_collaborate_with_project?
   - %w(revert cherry-pick).each do |type|
diff --git a/app/views/projects/diffs/_diffs.html.haml b/app/views/projects/diffs/_diffs.html.haml
index 94f765a097c..2a15c306f07 100644
--- a/app/views/projects/diffs/_diffs.html.haml
+++ b/app/views/projects/diffs/_diffs.html.haml
@@ -2,7 +2,7 @@
 - if diff_view == 'parallel'
   - fluid_layout true
 
-- diff_files = safe_diff_files(diffs, diff_refs)
+- diff_files = safe_diff_files(diffs, diff_refs: diff_refs, repository: project.repository)
 
 .content-block.oneline-block.files-changed
   .inline-parallel-buttons
@@ -24,7 +24,7 @@
 .files{data: {can_create_note: (!@diff_notes_disabled && can?(current_user, :create_note, @project))}}
   - diff_files.each_with_index do |diff_file, index|
     - diff_commit = commit_for_diff(diff_file)
-    - blob = project.repository.blob_for_diff(diff_commit, diff_file)
+    - blob = diff_file.blob(diff_commit)
     - next unless blob
     - blob.load_all_data!(project.repository) unless blob.only_display_raw?
 
diff --git a/app/views/projects/diffs/_file.html.haml b/app/views/projects/diffs/_file.html.haml
index 2395ea3c275..3b758a1ec4e 100644
--- a/app/views/projects/diffs/_file.html.haml
+++ b/app/views/projects/diffs/_file.html.haml
@@ -1,29 +1,8 @@
-.diff-file.file-holder{id: "diff-#{i}", data: diff_file_html_data(project, diff_commit, diff_file)}
+.diff-file.file-holder{id: "diff-#{i}", data: diff_file_html_data(project, diff_file)}
   .file-title{id: "file-path-#{hexdigest(diff_file.file_path)}"}
-    - if diff_file.diff.submodule?
-      %span
-        = icon('archive fw')
-        %span
-          = submodule_link(blob, @commit.id, project.repository)
-    - else
-      = blob_icon blob.mode, blob.name
-
-      = link_to "#diff-#{i}" do
-        - if diff_file.renamed_file
-          - old_path, new_path = mark_inline_diffs(diff_file.old_path, diff_file.new_path)
-          = old_path
-          &rarr;
-          = new_path
-        - else
-          %span
-            = diff_file.new_path
-          - if diff_file.deleted_file
-            deleted
-
-      - if diff_file.mode_changed?
-        %small
-          = "#{diff_file.diff.a_mode} → #{diff_file.diff.b_mode}"
+    = render "projects/diffs/file_header", diff_file: diff_file, blob: blob, diff_commit: diff_commit, project: project, url: "#diff-#{i}"
 
+    - unless diff_file.submodule?
       .file-actions.hidden-xs
         - if blob_text_viewable?(blob)
           = link_to '#', class: 'js-toggle-diff-comments btn active has-tooltip btn-file-option', title: "Toggle comments for this file" do
@@ -42,17 +21,23 @@
     - return unless blob.respond_to?(:text?)
     - if diff_file.too_large?
       .nothing-here-block This diff could not be displayed because it is too large.
-    - elsif blob_text_viewable?(blob) && !project.repository.diffable?(blob)
-      .nothing-here-block This diff was suppressed by a .gitattributes entry.
-    - elsif blob_text_viewable?(blob)
-      - if diff_view == 'parallel'
-        = render "projects/diffs/parallel_view", diff_file: diff_file, project: project, blob: blob, index: i
-      - else
-        = render "projects/diffs/text_file", diff_file: diff_file, index: i
     - elsif blob.only_display_raw?
       .nothing-here-block This file is too large to display.
+    - elsif blob_text_viewable?(blob)
+      - if !project.repository.diffable?(blob)
+        .nothing-here-block This diff was suppressed by a .gitattributes entry.
+      - elsif diff_file.diff_lines.length > 0
+        - if diff_view == 'parallel'
+          = render "projects/diffs/parallel_view", diff_file: diff_file, project: project, blob: blob, index: i
+        - else
+          = render "projects/diffs/text_file", diff_file: diff_file, index: i
+      - else
+        - if diff_file.mode_changed?
+          .nothing-here-block File mode changed
+        - elsif diff_file.renamed_file
+          .nothing-here-block File moved
     - elsif blob.image?
-      - old_file = project.repository.prev_blob_for_diff(diff_commit, diff_file)
-      = render "projects/diffs/image", diff_file: diff_file, old_file: old_file, file: blob, index: i, diff_refs: diff_refs
+      - old_blob = diff_file.old_blob(diff_commit)
+      = render "projects/diffs/image", diff_file: diff_file, old_file: old_blob, file: blob, index: i
     - else
       .nothing-here-block No preview for this file type
diff --git a/app/views/projects/diffs/_file_header.html.haml b/app/views/projects/diffs/_file_header.html.haml
new file mode 100644
index 00000000000..95a2772fd0b
--- /dev/null
+++ b/app/views/projects/diffs/_file_header.html.haml
@@ -0,0 +1,25 @@
+- if defined?(blob) && blob && diff_file.submodule?
+  %span
+    = icon('archive fw')
+    %span
+      = submodule_link(blob, diff_commit.id, project.repository)
+- else
+  = conditional_link_to url.present?, url do
+    = blob_icon diff_file.b_mode, diff_file.file_path
+
+    - if diff_file.renamed_file
+      - old_path, new_path = mark_inline_diffs(diff_file.old_path, diff_file.new_path)
+      %strong
+        = old_path
+      &rarr;
+      %strong
+        = new_path
+    - else
+      %strong
+        = diff_file.new_path
+      - if diff_file.deleted_file
+        deleted
+
+  - if diff_file.mode_changed?
+    %small
+      = "#{diff_file.a_mode} → #{diff_file.b_mode}"
diff --git a/app/views/projects/diffs/_image.html.haml b/app/views/projects/diffs/_image.html.haml
index 2731219ccad..9ec6a7aa5cd 100644
--- a/app/views/projects/diffs/_image.html.haml
+++ b/app/views/projects/diffs/_image.html.haml
@@ -1,9 +1,8 @@
 - diff = diff_file.diff
-- file_raw_path = namespace_project_raw_path(@project.namespace, @project, tree_join(@commit.id, diff.new_path))
+- file_raw_path = namespace_project_raw_path(@project.namespace, @project, tree_join(diff_file.new_ref, diff.new_path))
 // diff_refs will be nil for orphaned commits (e.g. first commit in repo)
-- if diff_refs
-  - old_commit_id = diff_refs.first.id
-  - old_file_raw_path = namespace_project_raw_path(@project.namespace, @project, tree_join(old_commit_id, diff.old_path))
+- if diff_file.old_ref
+  - old_file_raw_path = namespace_project_raw_path(@project.namespace, @project, tree_join(diff_file.old_ref, diff.old_path))
 
 - if diff.renamed_file || diff.new_file || diff.deleted_file
   .image
@@ -16,7 +15,7 @@
     %div.two-up.view
       %span.wrap
         .frame.deleted
-          %a{href: namespace_project_blob_path(@project.namespace, @project, tree_join(old_commit_id, diff.old_path))}
+          %a{href: namespace_project_blob_path(@project.namespace, @project, tree_join(diff_file.old_ref, diff.old_path))}
             %img{src: old_file_raw_path}
         %p.image-info.hide
           %span.meta-filesize= "#{number_to_human_size old_file.size}"
@@ -28,7 +27,7 @@
           %span.meta-height
       %span.wrap
         .frame.added
-          %a{href: namespace_project_blob_path(@project.namespace, @project, tree_join(@commit.id, diff.new_path))}
+          %a{href: namespace_project_blob_path(@project.namespace, @project, tree_join(diff_file.new_ref, diff.new_path))}
             %img{src: file_raw_path}
         %p.image-info.hide
           %span.meta-filesize= "#{number_to_human_size file.size}"
diff --git a/app/views/projects/diffs/_line.html.haml b/app/views/projects/diffs/_line.html.haml
index 1953720b79e..5a8a131d10c 100644
--- a/app/views/projects/diffs/_line.html.haml
+++ b/app/views/projects/diffs/_line.html.haml
@@ -1,6 +1,8 @@
+- plain = local_assigns.fetch(:plain, false)
+- line_code = diff_file.line_code(line)
+- position = diff_file.position(line)
 - type = line.type
-- line_data = @diff_notes_disabled ? {} : { data: { discussion_id: discussion_id(line_code) } }
-%tr.line_holder{ line_data, id: line_code, class: type }
+%tr.line_holder{ id: line_code, class: type }
   - case type
   - when 'match'
     = render "projects/diffs/match_line", { line: line.text,
@@ -10,16 +12,16 @@
     %td.new_line.diff-line-num
     %td.line_content.match= line.text
   - else
-    %td.old_line.diff-line-num{ class: type, data: { linenumber: line.new_pos } }
+    %td.old_line.diff-line-num{ class: type, data: { linenumber: line.old_pos } }
       - link_text = type == "new" ? " " : line.old_pos
-      - if defined?(plain) && plain
+      - if plain
         = link_text
       - else
         %a{href: "##{line_code}", data: { linenumber: link_text }}
     %td.new_line.diff-line-num{ class: type, data: { linenumber: line.new_pos } }
       - link_text = type == "old" ? " " : line.new_pos
-      - if defined?(plain) && plain
+      - if plain
         = link_text
       - else
         %a{href: "##{line_code}", data: { linenumber: link_text }}
-    %td.line_content{ class: ['noteable_line', type], data: { line_code: line_code, line_type: type } }= diff_line_content(line.text, type)
+    %td.line_content.noteable_line{ class: type, data: (diff_view_line_data(line_code, position, type) unless plain) }= diff_line_content(line.text, type)
diff --git a/app/views/projects/diffs/_parallel_view.html.haml b/app/views/projects/diffs/_parallel_view.html.haml
index a234f778190..0f75fb53eb7 100644
--- a/app/views/projects/diffs/_parallel_view.html.haml
+++ b/app/views/projects/diffs/_parallel_view.html.haml
@@ -1,5 +1,5 @@
 / Side-by-side diff view
-%div.text-file.diff-wrap-lines.code.file-content.js-syntax-highlight{ data: note_text_file_data }
+%div.text-file.diff-wrap-lines.code.file-content.js-syntax-highlight{ data: diff_view_data }
   %table
     - diff_file.parallel_diff_lines.each do |line|
       - left = line[:left]
@@ -13,26 +13,24 @@
           %td.new_line.diff-line-num.empty-cell
           %td.line_content.parallel.match= left[:text]
         - else
-          %td.old_line.diff-line-num{id: left[:line_code], class: "#{left[:type]} #{'empty-cell' unless left[:number]}", data: { linenumber: left[:number] }}
+          %td.old_line.diff-line-num{id: left[:line_code], class: [left[:type], ('empty-cell' unless left[:number])], data: { linenumber: left[:number] }}
             %a{href: "##{left[:line_code]}" }= raw(left[:number])
-          %td.line_content{class: "parallel noteable_line #{left[:type]} #{'empty-cell' if left[:text].empty?}", data: note_line_parallel_data(left[:line_code], left[:type]) }= diff_line_content(left[:text])
+          %td.line_content.parallel.noteable_line{class: [left[:type], ('empty-cell' if left[:text].empty?)], data: diff_view_line_data(left[:line_code], left[:position], left[:type])}= diff_line_content(left[:text])
 
           - if right[:type] == 'new'
-            - new_line_class = 'new'
+            - new_line_type = 'new'
             - new_line_code = right[:line_code]
+            - new_position = right[:position]
           - else
-            - new_line_class = nil
+            - new_line_type = nil
             - new_line_code = left[:line_code]
+            - new_position = left[:position]
 
-          %td.new_line.diff-line-num{id: new_line_code, class: "#{new_line_class} #{'empty-cell' unless right[:number]}", data: { linenumber: right[:number] } }
+          %td.new_line.diff-line-num{id: new_line_code, class: [new_line_type, ('empty-cell' unless right[:number])], data: { linenumber: right[:number] }}
             %a{href: "##{new_line_code}" }= raw(right[:number])
-          %td.line_content.parallel{class: "noteable_line #{new_line_class} #{'empty-cell' if right[:text].empty?}", data: note_line_parallel_data(new_line_code, new_line_class) }= diff_line_content(right[:text])
+          %td.line_content.parallel.noteable_line{class: [new_line_type, ('empty-cell' if right[:text].empty?)], data: diff_view_line_data(new_line_code, new_position, new_line_type)}= diff_line_content(right[:text])
 
       - unless @diff_notes_disabled
         - notes_left, notes_right = organize_comments(left, right)
         - if notes_left.present? || notes_right.present?
           = render "projects/notes/diff_notes_with_reply_parallel", notes_left: notes_left, notes_right: notes_right
-
-- if diff_file.diff.diff.blank? && diff_file.mode_changed?
-  .file-mode-changed
-    File mode changed
diff --git a/app/views/projects/diffs/_text_file.html.haml b/app/views/projects/diffs/_text_file.html.haml
index 3a3aff4d054..196f8122db3 100644
--- a/app/views/projects/diffs/_text_file.html.haml
+++ b/app/views/projects/diffs/_text_file.html.haml
@@ -3,23 +3,18 @@
   .suppressed-container
     %a.show-suppressed-diff.js-show-suppressed-diff Changes suppressed. Click to show.
 
-%table.text-file.code.js-syntax-highlight{ data: note_text_file_data, class: too_big ? 'hide' : '' }
-
+%table.text-file.code.js-syntax-highlight{ data: diff_view_data, class: too_big ? 'hide' : '' }
   - last_line = 0
-  - diff_file.highlighted_diff_lines.each_with_index do |line, index|
-    - line_code = generate_line_code(diff_file.file_path, line)
+  - diff_file.highlighted_diff_lines.each do |line|
     - last_line = line.new_pos
-    = render "projects/diffs/line", {line: line, diff_file: diff_file, line_code: line_code}
+    = render "projects/diffs/line", line: line, diff_file: diff_file
 
     - unless @diff_notes_disabled
-      - diff_notes = @grouped_diff_notes[line_code]
+      - line_code = diff_file.line_code(line)
+      - diff_notes = @grouped_diff_notes[line_code] if line_code
       - if diff_notes
         = render "projects/notes/diff_notes_with_reply", notes: diff_notes
 
   - if last_line > 0
     = render "projects/diffs/match_line", { line: "",
       line_old: last_line, line_new: last_line, bottom: true, new_file: diff_file.new_file }
-
-- if diff_file.diff.blank? && diff_file.mode_changed?
-  .file-mode-changed
-    File mode changed
diff --git a/app/views/projects/merge_requests/widget/_heading.html.haml b/app/views/projects/merge_requests/widget/_heading.html.haml
index 08a38d283d2..489c632ae22 100644
--- a/app/views/projects/merge_requests/widget/_heading.html.haml
+++ b/app/views/projects/merge_requests/widget/_heading.html.haml
@@ -7,7 +7,7 @@
           CI build
           = ci_label_for_status(status)
         for
-        - commit = @merge_request.last_commit
+        - commit = @merge_request.diff_head_commit
         = succeed "." do
           = link_to @pipeline.short_sha, namespace_project_commit_path(@merge_request.source_project.namespace, @merge_request.source_project, @pipeline.sha), class: "monospace"
         %span.ci-coverage
@@ -24,7 +24,7 @@
           CI build
           = ci_label_for_status(status)
         for
-        - commit = @merge_request.last_commit
+        - commit = @merge_request.diff_head_commit
         = succeed "." do
           = link_to commit.short_id, namespace_project_commit_path(@merge_request.source_project.namespace, @merge_request.source_project, commit), class: "monospace"
         %span.ci-coverage
@@ -33,12 +33,12 @@
 
     .ci_widget
       = icon("spinner spin")
-      Checking CI status for #{@merge_request.last_commit_short_sha}&hellip;
+      Checking CI status for #{@merge_request.diff_head_commit.short_id}&hellip;
 
     .ci_widget.ci-not_found{style: "display:none"}
       = icon("times-circle")
-      Could not find CI status for #{@merge_request.last_commit_short_sha}.
+      Could not find CI status for #{@merge_request.diff_head_commit.short_id}.
 
     .ci_widget.ci-error{style: "display:none"}
       = icon("times-circle")
-      Could not connect to the CI server. Please check your settings and try again.
\ No newline at end of file
+      Could not connect to the CI server. Please check your settings and try again.
diff --git a/app/views/projects/merge_requests/widget/open/_accept.html.haml b/app/views/projects/merge_requests/widget/open/_accept.html.haml
index 941513febbd..bf2e76f0083 100644
--- a/app/views/projects/merge_requests/widget/open/_accept.html.haml
+++ b/app/views/projects/merge_requests/widget/open/_accept.html.haml
@@ -2,7 +2,7 @@
 
 = form_for [:merge, @project.namespace.becomes(Namespace), @project, @merge_request], remote: true, method: :post, html: { class: 'accept-mr-form js-quick-submit js-requires-input' } do |f|
   = hidden_field_tag :authenticity_token, form_authenticity_token
-  = hidden_field_tag :sha, @merge_request.source_sha
+  = hidden_field_tag :sha, @merge_request.diff_head_sha
   .accept-merge-holder.clearfix.js-toggle-container
     .clearfix
       .accept-action
diff --git a/app/views/projects/merge_requests/widget/open/_merge_when_build_succeeds.html.haml b/app/views/projects/merge_requests/widget/open/_merge_when_build_succeeds.html.haml
index ad898ff153b..2b6b5e05e86 100644
--- a/app/views/projects/merge_requests/widget/open/_merge_when_build_succeeds.html.haml
+++ b/app/views/projects/merge_requests/widget/open/_merge_when_build_succeeds.html.haml
@@ -16,7 +16,7 @@
   - if remove_source_branch_button || user_can_cancel_automatic_merge
     .clearfix.prepend-top-10
       - if remove_source_branch_button
-        = link_to merge_namespace_project_merge_request_path(@merge_request.target_project.namespace, @merge_request.target_project, @merge_request, merge_when_build_succeeds: true, should_remove_source_branch: true, sha: @merge_request.source_sha), remote: true, method: :post, class: "btn btn-grouped btn-primary btn-sm remove_source_branch" do
+        = link_to merge_namespace_project_merge_request_path(@merge_request.target_project.namespace, @merge_request.target_project, @merge_request, merge_when_build_succeeds: true, should_remove_source_branch: true, sha: @merge_request.diff_head_sha), remote: true, method: :post, class: "btn btn-grouped btn-primary btn-sm remove_source_branch" do
           = icon('times')
           Remove Source Branch When Merged
 
diff --git a/app/views/projects/notes/_diff_notes_with_reply.html.haml b/app/views/projects/notes/_diff_notes_with_reply.html.haml
index 8144c1ba49e..ec6c4938efc 100644
--- a/app/views/projects/notes/_diff_notes_with_reply.html.haml
+++ b/app/views/projects/notes/_diff_notes_with_reply.html.haml
@@ -4,5 +4,4 @@
   %td.notes_content
     %ul.notes{ data: { discussion_id: note.discussion_id } }
       = render partial: "projects/notes/note", collection: notes, as: :note
-    .discussion-reply-holder
-      = link_to_reply_discussion(note)
+    = link_to_reply_discussion(note)
diff --git a/app/views/projects/notes/_diff_notes_with_reply_parallel.html.haml b/app/views/projects/notes/_diff_notes_with_reply_parallel.html.haml
index 45986b0d1e8..e50a4f86d03 100644
--- a/app/views/projects/notes/_diff_notes_with_reply_parallel.html.haml
+++ b/app/views/projects/notes/_diff_notes_with_reply_parallel.html.haml
@@ -8,8 +8,7 @@
       %ul.notes{ data: { discussion_id: note_left.discussion_id } }
         = render partial: "projects/notes/note", collection: notes_left, as: :note
 
-      .discussion-reply-holder
-        = link_to_reply_discussion(note_left, 'old')
+      = link_to_reply_discussion(note_left, 'old')
   - else
     %td.notes_line.old= ""
     %td.notes_content.parallel.old= ""
@@ -20,8 +19,7 @@
       %ul.notes{ data: { discussion_id: note_right.discussion_id } }
         = render partial: "projects/notes/note", collection: notes_right, as: :note
 
-      .discussion-reply-holder
-        = link_to_reply_discussion(note_right, 'new')
+      = link_to_reply_discussion(note_right, 'new')
   - else
     %td.notes_line.new= ""
     %td.notes_content.parallel.new= ""
diff --git a/app/views/projects/notes/_form.html.haml b/app/views/projects/notes/_form.html.haml
index 03b3f6935d1..7c61ba750fe 100644
--- a/app/views/projects/notes/_form.html.haml
+++ b/app/views/projects/notes/_form.html.haml
@@ -7,6 +7,7 @@
   = f.hidden_field :noteable_id
   = f.hidden_field :noteable_type
   = f.hidden_field :type
+  = f.hidden_field :position
 
   = render layout: 'projects/md_preview', locals: { preview_class: "md-preview", referenced_users: true } do
     = render 'projects/zen', f: f, attr: :note, classes: 'note-textarea js-note-text', placeholder: "Write a comment or drag your files here..."
diff --git a/app/views/projects/notes/discussions/_diff_with_notes.html.haml b/app/views/projects/notes/discussions/_diff_with_notes.html.haml
index 6401245bf73..4a69b8f8840 100644
--- a/app/views/projects/notes/discussions/_diff_with_notes.html.haml
+++ b/app/views/projects/notes/discussions/_diff_with_notes.html.haml
@@ -1,30 +1,17 @@
 - note = discussion_notes.first
-- diff = note.diff
-- return unless diff
+- diff_file = note.diff_file
+- return unless diff_file
+
+- blob = note.blob
+
+.diff-file.file-holder
+  .file-title
+    = render "projects/diffs/file_header", diff_file: diff_file, blob: blob, diff_commit: diff_file.content_commit, project: note.project, url: diff_note_path(note)
 
-.diff-file
-  .diff-header
-    %span
-      - if diff.deleted_file
-        = diff.old_path
-      - else
-        = diff.new_path
-        - if diff.a_mode && diff.b_mode && diff.a_mode != diff.b_mode
-          %span.file-mode= "#{diff.a_mode} → #{diff.b_mode}"
   .diff-content.code.js-syntax-highlight
     %table
       - note.truncated_diff_lines.each do |line|
-        - type = line.type
-        - line_code = generate_line_code(note.diff_file_path, line)
-        %tr.line_holder{ id: line_code, class: "#{type}" }
-          - if type == "match"
-            %td.old_line.diff-line-num= "..."
-            %td.new_line.diff-line-num= "..."
-            %td.line_content.match= line.text
-          - else
-            %td.old_line.diff-line-num{ data: { linenumber: type == "new" ? "&nbsp;".html_safe : line.old_pos } }
-            %td.new_line.diff-line-num{ data: { linenumber: type == "old" ? "&nbsp;".html_safe : line.new_pos } }
-            %td.line_content{ class: ['noteable_line', type, line_code], line_code: line_code }= diff_line_content(line.text, type)
+        = render "projects/diffs/line", line: line, diff_file: diff_file, plain: true
 
-            - if line_code == note.line_code
-              = render "projects/notes/diff_notes_with_reply", notes: discussion_notes
+        - if note.for_line?(line)
+          = render "projects/notes/diff_notes_with_reply", notes: discussion_notes
diff --git a/app/views/projects/notes/discussions/_notes.html.haml b/app/views/projects/notes/discussions/_notes.html.haml
index e598e3c7c63..a785149549d 100644
--- a/app/views/projects/notes/discussions/_notes.html.haml
+++ b/app/views/projects/notes/discussions/_notes.html.haml
@@ -3,5 +3,4 @@
   .notes{ data: { discussion_id: note.discussion_id } }
     %ul.notes.timeline
       = render partial: "projects/notes/note", collection: discussion_notes, as: :note
-  .discussion-reply-holder
-    = link_to_reply_discussion(note)
+  = link_to_reply_discussion(note)
diff --git a/app/views/projects/pipelines/index.html.haml b/app/views/projects/pipelines/index.html.haml
index 28b475d5c2f..6a127afa410 100644
--- a/app/views/projects/pipelines/index.html.haml
+++ b/app/views/projects/pipelines/index.html.haml
@@ -50,7 +50,7 @@
             - stages.each do |stage|
               %th.stage
                 %span.has-tooltip{ title: "#{stage.titleize}" }
-                  = stage.titleize.pluralize
+                  = stage.titleize
             %th Duration
             %th
           = render @pipelines, commit_sha: true, stage: true, allow_retry: true, stages: stages
diff --git a/app/views/projects/tags/index.html.haml b/app/views/projects/tags/index.html.haml
index c375bb6dd1b..368231e73fe 100644
--- a/app/views/projects/tags/index.html.haml
+++ b/app/views/projects/tags/index.html.haml
@@ -7,22 +7,22 @@
     .nav-text
       Tags give the ability to mark specific points in history as being important
 
-    - if can? current_user, :push_code, @project
-      .nav-controls
+    .nav-controls
+      - if can? current_user, :push_code, @project
         = link_to new_namespace_project_tag_path(@project.namespace, @project), class: 'btn btn-create new-tag-btn' do
           New tag
-        .dropdown.inline
-          %button.dropdown-toggle.btn{ type: 'button', data: { toggle: 'dropdown'} }
-            %span.light= @sort.humanize
-            %b.caret
-          %ul.dropdown-menu.dropdown-menu-align-right
-            %li
-              = link_to namespace_project_tags_path(sort: nil) do
-                Name
-              = link_to namespace_project_tags_path(sort: sort_value_recently_updated) do
-                = sort_title_recently_updated
-              = link_to namespace_project_tags_path(sort: sort_value_oldest_updated) do
-                = sort_title_oldest_updated
+      .dropdown.inline
+        %button.dropdown-toggle.btn{ type: 'button', data: { toggle: 'dropdown'} }
+          %span.light= @sort.humanize
+          %b.caret
+        %ul.dropdown-menu.dropdown-menu-align-right
+          %li
+            = link_to namespace_project_tags_path(sort: nil) do
+              Name
+            = link_to namespace_project_tags_path(sort: sort_value_recently_updated) do
+              = sort_title_recently_updated
+            = link_to namespace_project_tags_path(sort: sort_value_oldest_updated) do
+              = sort_title_oldest_updated
 
   .tags
     - if @tags.any?
diff --git a/app/views/shared/_labels_row.html.haml b/app/views/shared/_labels_row.html.haml
index 5507a05f6c1..dce492352ac 100644
--- a/app/views/shared/_labels_row.html.haml
+++ b/app/views/shared/_labels_row.html.haml
@@ -1,10 +1,9 @@
 - labels.each do |label|
-  %span.label-row.btn-group{ role: "group", aria: { label: escape_once(label.name) }, style: "color: #{text_color_for_bg(label.color)}" }
-    = link_to label_filter_path(@project, label, type: controller.controller_name),
+  %span.label-row.btn-group{ role: "group", aria: { label: label.name }, style: "color: #{text_color_for_bg(label.color)}" }
+    = link_to label.name, label_filter_path(@project, label, type: controller.controller_name),
       class: "btn btn-transparent has-tooltip",
       style: "background-color: #{label.color};",
       title: escape_once(label.description),
-      data: { container: "body" } do
-      = escape_once label.name
+      data: { container: "body" }
     %button.btn.btn-transparent.label-remove.js-label-filter-remove{ type: "button", style: "background-color: #{label.color};", data: { label: label.title } }
       = icon("times")
diff --git a/app/views/shared/members/_member.html.haml b/app/views/shared/members/_member.html.haml
index a884e78e6e7..5ae485f36ba 100644
--- a/app/views/shared/members/_member.html.haml
+++ b/app/views/shared/members/_member.html.haml
@@ -3,71 +3,74 @@
 - user = member.user
 
 %li.js-toggle-container{ class: dom_class(member), id: dom_id(member) }
-  %span{ class: ("list-item-name" if show_controls) }
-    - if user
-      = image_tag avatar_icon(user, 24), class: "avatar s24", alt: ''
-      %strong
-        = link_to user.name, user_path(user)
-      %span.cgray= user.username
-
-      - if user == current_user
-        %span.label.label-success It's you
-
-      - if user.blocked?
-        %label.label.label-danger
-          %strong Blocked
-
-      - if member.request?
-        %span.cgray
-          – Requested
-          = time_ago_with_tooltip(member.requested_at)
-    - else
-      = image_tag avatar_icon(member.invite_email, 24), class: "avatar s24", alt: ''
-      %strong= member.invite_email
-      %span.cgray
-        – Invited
-        - if member.created_by
-          by
-          = link_to member.created_by.name, user_path(member.created_by)
-        = time_ago_with_tooltip(member.created_at)
-
-      - if show_controls && can?(current_user, action_member_permission(:admin, member), member.source)
-        = link_to 'Resend invite', polymorphic_path([:resend_invite, member]),
-                  method: :post,
-                  class: 'btn-xs btn'
-
   - if show_roles
-    %span.pull-right
-      %strong= member.human_access
+    .controls
+      %strong.control-text= member.human_access
       - if show_controls
+        - if !user && can?(current_user, action_member_permission(:admin, member), member.source)
+          = link_to 'Resend invite', polymorphic_path([:resend_invite, member]),
+                    method: :post,
+                    class: 'btn'
+
         - if can?(current_user, action_member_permission(:update, member), member)
           = button_tag icon('pencil'),
                        type: 'button',
-                       class: 'btn-xs btn btn-grouped inline js-toggle-button',
+                       class: 'btn inline js-toggle-button',
                        title: 'Edit access level'
 
           - if member.request?
-            &nbsp;
             = link_to icon('check inverse'), polymorphic_path([:approve_access_request, member]),
                       method: :post,
-                      class: 'btn-xs btn btn-success',
+                      class: 'btn btn-success',
                       title: 'Grant access'
 
         - if can?(current_user, action_member_permission(:destroy, member), member)
-          &nbsp;
           - if current_user == user
             = link_to icon('sign-out', text: 'Leave'), polymorphic_path([:leave, member.source, :members]),
                       method: :delete,
                       data: { confirm: leave_confirmation_message(member.source) },
-                      class: 'btn-xs btn btn-remove'
+                      class: 'btn btn-remove'
           - else
             = link_to icon('trash'), member,
                       remote: true,
                       method: :delete,
                       data: { confirm: remove_member_message(member) },
-                      class: 'btn-xs btn btn-remove',
+                      class: 'btn btn-remove',
                       title: remove_member_title(member)
 
+
+  %span{ class: ("list-item-name" if show_controls) }
+    - if user
+      = image_tag avatar_icon(user, 40), class: "avatar s40", alt: ''
+      %strong
+        = link_to user.name, user_path(user)
+      %span.cgray= user.username
+
+      - if user == current_user
+        %span.label.label-success It's you
+
+      - if user.blocked?
+        %label.label.label-danger
+          %strong Blocked
+
+      .cgray
+        - if member.request?
+          Requested
+          = time_ago_with_tooltip(member.requested_at)
+        - else
+          Joined #{time_ago_with_tooltip(member.created_at)}
+
+    - else
+      = image_tag avatar_icon(member.invite_email, 40), class: "avatar s40", alt: ''
+      %strong= member.invite_email
+      .cgray
+        Invited
+        - if member.created_by
+          by
+          = link_to member.created_by.name, user_path(member.created_by)
+        = time_ago_with_tooltip(member.created_at)
+
+  - if show_roles
     .edit-member.hide.js-toggle-content
       %br
       = form_for member, remote: true do |f|
diff --git a/app/views/shared/projects/_dropdown.html.haml b/app/views/shared/projects/_dropdown.html.haml
index 1169bed0382..b7f8551153b 100644
--- a/app/views/shared/projects/_dropdown.html.haml
+++ b/app/views/shared/projects/_dropdown.html.haml
@@ -1,31 +1,30 @@
 - @sort ||= sort_value_recently_updated
 - personal = params[:personal]
 - archived = params[:archived]
+- namespace_id = params[:namespace_id]
 .dropdown.inline
-  %button.dropdown-toggle.btn{type: 'button', 'data-toggle' => 'dropdown'}
-    %span.light
-      = projects_sort_options_hash[@sort]
-    %b.caret
+  - toggle_text = projects_sort_options_hash[@sort]
+  = dropdown_toggle(toggle_text, { toggle: 'dropdown' }, { id: 'sort-projects-dropdown' })
   %ul.dropdown-menu.dropdown-menu-align-right.dropdown-menu-selectable
     %li.dropdown-header
       Sort by
     - projects_sort_options_hash.each do |value, title|
       %li
-        = link_to filter_projects_path(sort: value, archived: archived, personal: personal), class: ("is-active" if @sort == value) do
+        = link_to filter_projects_path(namespace_id: namespace_id, sort: value, archived: archived, personal: personal), class: ("is-active" if @sort == value) do
           = title
 
     %li.divider
     %li
-      = link_to filter_projects_path(sort: @sort, archived: nil), class: ("is-active" unless params[:archived].present?) do
+      = link_to filter_projects_path(namespace_id: namespace_id, sort: @sort, archived: nil), class: ("is-active" unless params[:archived].present?) do
         Hide archived projects
     %li
-      = link_to filter_projects_path(sort: @sort, archived: true), class: ("is-active" if params[:archived].present?) do
+      = link_to filter_projects_path(namespace_id: namespace_id, sort: @sort, archived: true), class: ("is-active" if params[:archived].present?) do
         Show archived projects
     - if current_user
       %li.divider
       %li
-        = link_to filter_projects_path(sort: @sort, personal: nil), class: ("is-active" unless personal) do
+        = link_to filter_projects_path(namespace_id: namespace_id, sort: @sort, personal: nil), class: ("is-active" unless personal.present?) do
           Owned by anyone
       %li
-        = link_to filter_projects_path(sort: @sort, personal: true), class: ("is-active" if personal) do
+        = link_to filter_projects_path(namespace_id: namespace_id, sort: @sort, personal: true), class: ("is-active" if personal.present?) do
           Owned by me
diff --git a/app/workers/emails_on_push_worker.rb b/app/workers/emails_on_push_worker.rb
index 971f969e25e..8551288e2f2 100644
--- a/app/workers/emails_on_push_worker.rb
+++ b/app/workers/emails_on_push_worker.rb
@@ -28,18 +28,30 @@ class EmailsOnPushWorker
         :push
       end
 
+    merge_base_sha = project.merge_base_commit(before_sha, after_sha).try(:sha)
+
     diff_refs = nil
     compare = nil
     reverse_compare = false
     if action == :push
       compare = Gitlab::Git::Compare.new(project.repository.raw_repository, before_sha, after_sha)
-      diff_refs = [project.merge_base_commit(before_sha, after_sha), project.commit(after_sha)]
+
+      diff_refs = Gitlab::Diff::DiffRefs.new(
+        base_sha: merge_base_sha,
+        start_sha: before_sha,
+        head_sha: after_sha
+      )
 
       return false if compare.same
 
       if compare.commits.empty?
         compare = Gitlab::Git::Compare.new(project.repository.raw_repository, after_sha, before_sha)
-        diff_refs = [project.merge_base_commit(after_sha, before_sha), project.commit(before_sha)]
+
+        diff_refs = Gitlab::Diff::DiffRefs.new(
+          base_sha: merge_base_sha,
+          start_sha: after_sha,
+          head_sha: before_sha
+        )
 
         reverse_compare = true
 
diff --git a/db/migrate/20160508202603_add_head_commit_id_to_merge_request_diffs.rb b/db/migrate/20160508202603_add_head_commit_id_to_merge_request_diffs.rb
new file mode 100644
index 00000000000..1c4d60e7234
--- /dev/null
+++ b/db/migrate/20160508202603_add_head_commit_id_to_merge_request_diffs.rb
@@ -0,0 +1,5 @@
+class AddHeadCommitIdToMergeRequestDiffs < ActiveRecord::Migration
+  def change
+    add_column :merge_request_diffs, :head_commit_sha, :string
+  end
+end
diff --git a/db/migrate/20160508215920_add_positions_to_diff_notes.rb b/db/migrate/20160508215920_add_positions_to_diff_notes.rb
new file mode 100644
index 00000000000..2952c25004e
--- /dev/null
+++ b/db/migrate/20160508215920_add_positions_to_diff_notes.rb
@@ -0,0 +1,6 @@
+class AddPositionsToDiffNotes < ActiveRecord::Migration
+  def change
+    add_column :notes, :position, :text
+    add_column :notes, :original_position, :text
+  end
+end
diff --git a/db/migrate/20160516224534_add_start_commit_id_to_merge_request_diffs.rb b/db/migrate/20160516224534_add_start_commit_id_to_merge_request_diffs.rb
new file mode 100644
index 00000000000..b7fd76ee84b
--- /dev/null
+++ b/db/migrate/20160516224534_add_start_commit_id_to_merge_request_diffs.rb
@@ -0,0 +1,5 @@
+class AddStartCommitIdToMergeRequestDiffs < ActiveRecord::Migration
+  def change
+    add_column :merge_request_diffs, :start_commit_sha, :string
+  end
+end
diff --git a/db/migrate/20160522215720_add_note_type_and_position_to_sent_notification.rb b/db/migrate/20160522215720_add_note_type_and_position_to_sent_notification.rb
new file mode 100644
index 00000000000..4eef16c9408
--- /dev/null
+++ b/db/migrate/20160522215720_add_note_type_and_position_to_sent_notification.rb
@@ -0,0 +1,22 @@
+# See http://doc.gitlab.com/ce/development/migration_style_guide.html
+# for more information on how to write migrations for GitLab.
+
+class AddNoteTypeAndPositionToSentNotification < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+
+  # When using the methods "add_concurrent_index" or "add_column_with_default"
+  # you must disable the use of transactions as these methods can not run in an
+  # existing transaction. When using "add_concurrent_index" make sure that this
+  # method is the _only_ method called in the migration, any other changes
+  # should go in a separate migration. This ensures that upon failure _only_ the
+  # index creation fails and can be retried or reverted easily.
+  #
+  # To disable transactions uncomment the following line and remove these
+  # comments:
+  # disable_ddl_transaction!
+
+  def change
+    add_column :sent_notifications, :note_type, :string
+    add_column :sent_notifications, :position, :text
+  end
+end
diff --git a/db/migrate/20160620110927_fix_no_validatable_import_url.rb b/db/migrate/20160620110927_fix_no_validatable_import_url.rb
new file mode 100644
index 00000000000..82a616c62d9
--- /dev/null
+++ b/db/migrate/20160620110927_fix_no_validatable_import_url.rb
@@ -0,0 +1,86 @@
+# Updates project records containing invalid URLs using the AddressableUrlValidator.
+# This is optimized assuming the number of invalid records is low, but
+# we still need to loop through all the projects with an +import_url+
+# so we use batching for the latter.
+#
+# This migration is non-reversible as we would have to keep the old data.
+
+class FixNoValidatableImportUrl < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+  class SqlBatches
+
+    attr_reader :results, :query
+
+    def initialize(batch_size: 100, query:)
+      @offset = 0
+      @batch_size = batch_size
+      @query = query
+      @results = []
+    end
+
+    def next?
+      @results = ActiveRecord::Base.connection.exec_query(batched_sql)
+      @offset += @batch_size
+      @results.any?
+    end
+
+    private
+
+    def batched_sql
+      "#{@query} LIMIT #{@batch_size} OFFSET #{@offset}"
+    end
+  end
+
+  # AddressableValidator - Snapshot of AddressableUrlValidator
+  module AddressableUrlValidatorSnap
+    extend self
+
+    def valid_url?(value)
+      return false unless value
+
+      valid_uri?(value) && valid_protocol?(value)
+    rescue Addressable::URI::InvalidURIError
+      false
+    end
+
+    def valid_uri?(value)
+      Addressable::URI.parse(value).is_a?(Addressable::URI)
+    end
+
+    def valid_protocol?(value)
+      value =~ /\A#{URI.regexp(%w(http https ssh git))}\z/
+    end
+  end
+
+  def up
+    unless defined?(Addressable::URI::InvalidURIError)
+      say('Skipping cleaning up invalid import URLs as class from Addressable is missing')
+      return
+    end
+
+    say('Cleaning up invalid import URLs... This may take a few minutes if we have a large number of imported projects.')
+
+    invalid_import_url_project_ids.each { |project_id| cleanup_import_url(project_id) }
+  end
+
+  def invalid_import_url_project_ids
+    ids = []
+    batches = SqlBatches.new(query: "SELECT id, import_url FROM projects WHERE import_url IS NOT NULL")
+
+    while batches.next?
+      batches.results.each do |result|
+        ids << result['id'] unless valid_url?(result['import_url'])
+      end
+    end
+
+    ids
+  end
+
+  def valid_url?(url)
+    AddressableUrlValidatorSnap.valid_url?(url)
+  end
+
+  def cleanup_import_url(project_id)
+    execute("UPDATE projects SET import_url = NULL WHERE id = #{project_id}")
+  end
+end
diff --git a/db/schema.rb b/db/schema.rb
index f6465136e6a..68b9425253c 100644
--- a/db/schema.rb
+++ b/db/schema.rb
@@ -593,6 +593,8 @@ ActiveRecord::Schema.define(version: 20160705163108) do
     t.datetime "updated_at"
     t.string   "base_commit_sha"
     t.string   "real_size"
+    t.string   "head_commit_sha"
+    t.string   "start_commit_sha"
   end
 
   add_index "merge_request_diffs", ["merge_request_id"], name: "index_merge_request_diffs_on_merge_request_id", unique: true, using: :btree
@@ -689,10 +691,12 @@ ActiveRecord::Schema.define(version: 20160705163108) do
     t.string   "line_code"
     t.string   "commit_id"
     t.integer  "noteable_id"
-    t.boolean  "system",        default: false, null: false
+    t.boolean  "system",            default: false, null: false
     t.text     "st_diff"
     t.integer  "updated_by_id"
     t.string   "type"
+    t.text     "position"
+    t.text     "original_position"
   end
 
   add_index "notes", ["author_id"], name: "index_notes_on_author_id", using: :btree
@@ -881,6 +885,8 @@ ActiveRecord::Schema.define(version: 20160705163108) do
     t.string  "commit_id"
     t.string  "reply_key",     null: false
     t.string  "line_code"
+    t.string  "note_type"
+    t.text    "position"
   end
 
   add_index "sent_notifications", ["reply_key"], name: "index_sent_notifications_on_reply_key", unique: true, using: :btree
diff --git a/doc/administration/auth/ldap.md b/doc/administration/auth/ldap.md
index 10096779844..7186f707ad6 100644
--- a/doc/administration/auth/ldap.md
+++ b/doc/administration/auth/ldap.md
@@ -130,27 +130,27 @@ main: # 'main' is the GitLab 'provider ID' of this LDAP server
     first_name: 'givenName'
     last_name:  'sn'
 
-    ## EE only
-
-    # Base where we can search for groups
-    #
-    #   Ex. ou=groups,dc=gitlab,dc=example
-    #
-    group_base: ''
-
-    # The CN of a group containing GitLab administrators
-    #
-    #   Ex. administrators
-    #
-    #   Note: Not `cn=administrators` or the full DN
-    #
-    admin_group: ''
-
-    # The LDAP attribute containing a user's public SSH key
-    #
-    #   Ex. ssh_public_key
-    #
-    sync_ssh_keys: false
+  ## EE only
+
+  # Base where we can search for groups
+  #
+  #   Ex. ou=groups,dc=gitlab,dc=example
+  #
+  group_base: ''
+
+  # The CN of a group containing GitLab administrators
+  #
+  #   Ex. administrators
+  #
+  #   Note: Not `cn=administrators` or the full DN
+  #
+  admin_group: ''
+
+  # The LDAP attribute containing a user's public SSH key
+  #
+  #   Ex. ssh_public_key
+  #
+  sync_ssh_keys: false
 
 # GitLab EE only: add more LDAP servers
 # Choose an ID made of a-z and 0-9 . This ID will be stored in the database
diff --git a/features/admin/projects.feature b/features/admin/projects.feature
index c5ee80136c8..8929bcf8d80 100644
--- a/features/admin/projects.feature
+++ b/features/admin/projects.feature
@@ -10,10 +10,11 @@ Feature: Admin Projects
     Then I should see all non-archived projects
     And I should not see project "Archive"
 
+  @javascript
   Scenario: I should see all projects in the list
     Given archived project "Archive"
     When I visit admin projects page
-    And I check "Show archived projects"
+    And I select "Show archived projects"
     Then I should see all projects
     And I should see "archived" label
 
@@ -22,6 +23,7 @@ Feature: Admin Projects
     And I click on first project
     Then I should see project details
 
+  @javascript
   Scenario: Transfer project
     Given group 'Web'
     And I visit admin project page
diff --git a/features/steps/admin/groups.rb b/features/steps/admin/groups.rb
index 8613dc537cc..0c89a3db9ad 100644
--- a/features/steps/admin/groups.rb
+++ b/features/steps/admin/groups.rb
@@ -62,7 +62,8 @@ class Spinach::Features::AdminGroups < Spinach::FeatureSteps
 
   step 'I should see "johndoe@gitlab.com" in team list in every project as "Reporter"' do
     page.within ".group-users-list" do
-      expect(page).to have_content "johndoe@gitlab.com – Invited by"
+      expect(page).to have_content "johndoe@gitlab.com"
+      expect(page).to have_content "Invited by"
       expect(page).to have_content "Reporter"
     end
   end
diff --git a/features/steps/admin/projects.rb b/features/steps/admin/projects.rb
index a7a28755a6c..d77945a6b9c 100644
--- a/features/steps/admin/projects.rb
+++ b/features/steps/admin/projects.rb
@@ -18,9 +18,9 @@ class Spinach::Features::AdminProjects < Spinach::FeatureSteps
     end
   end
 
-  step 'I check "Show archived projects"' do
-    page.check 'Show archived projects'
-    click_button "Search"
+  step 'I select "Show archived projects"' do
+    find(:css, '#sort-projects-dropdown').click
+    click_link 'Show archived projects'
   end
 
   step 'I should see "archived" label' do
@@ -45,7 +45,8 @@ class Spinach::Features::AdminProjects < Spinach::FeatureSteps
   step 'I transfer project to group \'Web\'' do
     allow_any_instance_of(Projects::TransferService).
       to receive(:move_uploads_to_new_namespace).and_return(true)
-    find(:xpath, "//input[@id='new_namespace_id']").set group.id
+    click_button 'Search for Namespace'
+    click_link 'group: web'
     click_button 'Transfer'
   end
 
diff --git a/features/steps/project/merge_requests.rb b/features/steps/project/merge_requests.rb
index 640f1720a6c..da848afd48e 100644
--- a/features/steps/project/merge_requests.rb
+++ b/features/steps/project/merge_requests.rb
@@ -272,10 +272,9 @@ class Spinach::Features::ProjectMergeRequests < Spinach::FeatureSteps
 
   step 'user "John Doe" leaves a comment like "Line is wrong" on diff' do
     mr = MergeRequest.find_by(title: "Bug NS-05")
-    create(:note_on_merge_request_diff, project: project,
+    create(:diff_note_on_merge_request, project: project,
                                         noteable: mr,
                                         author: user_exists("John Doe"),
-                                        line_code: sample_commit.line_code,
                                         note: 'Line is wrong')
   end
 
@@ -519,7 +518,7 @@ class Spinach::Features::ProjectMergeRequests < Spinach::FeatureSteps
   step '"Bug NS-05" has CI status' do
     project = merge_request.source_project
     project.enable_ci
-    pipeline = create :ci_pipeline, project: project, sha: merge_request.last_commit.id, ref: merge_request.source_branch
+    pipeline = create :ci_pipeline, project: project, sha: merge_request.diff_head_sha, ref: merge_request.source_branch
     create :ci_build, pipeline: pipeline
   end
 
diff --git a/features/steps/shared/diff_note.rb b/features/steps/shared/diff_note.rb
index 146cbcfad5e..4df4e89f5b9 100644
--- a/features/steps/shared/diff_note.rb
+++ b/features/steps/shared/diff_note.rb
@@ -23,7 +23,7 @@ module SharedDiffNote
     page.within(diff_file_selector) do
       click_diff_line(sample_commit.line_code)
 
-      page.within("form[id$='#{sample_commit.line_code}-true']") do
+      page.within("form[data-line-code='#{sample_commit.line_code}']") do
         fill_in "note[note]", with: "Typo, please fix"
         find(".js-comment-button").click
       end
@@ -32,7 +32,7 @@ module SharedDiffNote
 
   step 'I leave a diff comment in a parallel view on the left side like "Old comment"' do
     click_parallel_diff_line(sample_commit.del_line_code, 'old')
-    page.within("#{diff_file_selector} form[id$='#{sample_commit.del_line_code}-true']") do
+    page.within("#{diff_file_selector} form[data-line-code='#{sample_commit.del_line_code}']") do
       fill_in "note[note]", with: "Old comment"
       find(".js-comment-button").click
     end
@@ -40,7 +40,7 @@ module SharedDiffNote
 
   step 'I leave a diff comment in a parallel view on the right side like "New comment"' do
     click_parallel_diff_line(sample_commit.line_code, 'new')
-    page.within("#{diff_file_selector} form[id$='#{sample_commit.line_code}-true']") do
+    page.within("#{diff_file_selector} form[data-line-code='#{sample_commit.line_code}']") do
       fill_in "note[note]", with: "New comment"
       find(".js-comment-button").click
     end
@@ -50,7 +50,7 @@ module SharedDiffNote
     page.within(diff_file_selector) do
       click_diff_line(sample_commit.line_code)
 
-      page.within("form[id$='#{sample_commit.line_code}-true']") do
+      page.within("form[data-line-code='#{sample_commit.line_code}']") do
         fill_in "note[note]", with: "Should fix it :smile:"
         find('.js-md-preview-button').click
       end
@@ -61,7 +61,7 @@ module SharedDiffNote
     page.within(diff_file_selector) do
       click_diff_line(sample_commit.del_line_code)
 
-      page.within("form[id$='#{sample_commit.del_line_code}-true']") do
+      page.within("form[data-line-code='#{sample_commit.del_line_code}']") do
         fill_in "note[note]", with: "DRY this up"
         find('.js-md-preview-button').click
       end
@@ -90,7 +90,7 @@ module SharedDiffNote
     page.within(diff_file_selector) do
       click_diff_line(sample_commit.line_code)
 
-      page.within("form[id$='#{sample_commit.line_code}-true']") do
+      page.within("form[data-line-code='#{sample_commit.line_code}']") do
         fill_in 'note[note]', with: ':smile:'
         click_button('Comment')
       end
diff --git a/lib/api/entities.rb b/lib/api/entities.rb
index 8cc4368b5c2..db877d2eeb0 100644
--- a/lib/api/entities.rb
+++ b/lib/api/entities.rb
@@ -240,9 +240,9 @@ module API
 
     class CommitNote < Grape::Entity
       expose :note
-      expose(:path) { |note| note.diff_file_path if note.legacy_diff_note? }
-      expose(:line) { |note| note.diff_new_line if note.legacy_diff_note? }
-      expose(:line_type) { |note| note.diff_line_type if note.legacy_diff_note? }
+      expose(:path) { |note| note.diff_file.try(:file_path) if note.diff_note? }
+      expose(:line) { |note| note.diff_line.try(:new_line) if note.diff_note? }
+      expose(:line_type) { |note| note.diff_line.try(:type) if note.diff_note? }
       expose :author, using: Entities::UserBasic
       expose :created_at
     end
diff --git a/lib/api/merge_requests.rb b/lib/api/merge_requests.rb
index 0e94efd4acd..4fcdf8968c9 100644
--- a/lib/api/merge_requests.rb
+++ b/lib/api/merge_requests.rb
@@ -233,8 +233,8 @@ module API
 
           render_api_error!('Branch cannot be merged', 406) unless merge_request.mergeable?
 
-          if params[:sha] && merge_request.source_sha != params[:sha]
-            render_api_error!("SHA does not match HEAD of source branch: #{merge_request.source_sha}", 409)
+          if params[:sha] && merge_request.diff_head_sha != params[:sha]
+            render_api_error!("SHA does not match HEAD of source branch: #{merge_request.diff_head_sha}", 409)
           end
 
           merge_params = {
diff --git a/lib/banzai/filter/label_reference_filter.rb b/lib/banzai/filter/label_reference_filter.rb
index e4d3f87d0aa..e258dc8e2bf 100644
--- a/lib/banzai/filter/label_reference_filter.rb
+++ b/lib/banzai/filter/label_reference_filter.rb
@@ -13,13 +13,13 @@ module Banzai
       end
 
       def self.references_in(text, pattern = Label.reference_pattern)
-        text.gsub(pattern) do |match|
+        unescape_html_entities(text).gsub(pattern) do |match|
           yield match, $~[:label_id].to_i, $~[:label_name], $~[:project], $~
         end
       end
 
       def references_in(text, pattern = Label.reference_pattern)
-        text.gsub(pattern) do |match|
+        unescape_html_entities(text).gsub(pattern) do |match|
           label = find_label($~[:project], $~[:label_id], $~[:label_name])
 
           if label
@@ -66,6 +66,10 @@ module Banzai
           LabelsHelper.render_colored_cross_project_label(object)
         end
       end
+
+      def unescape_html_entities(text)
+        CGI.unescapeHTML(text.to_s)
+      end
     end
   end
 end
diff --git a/lib/gitlab/diff/diff_refs.rb b/lib/gitlab/diff/diff_refs.rb
new file mode 100644
index 00000000000..8406ca4269c
--- /dev/null
+++ b/lib/gitlab/diff/diff_refs.rb
@@ -0,0 +1,36 @@
+module Gitlab
+  module Diff
+    class DiffRefs
+      attr_reader :base_sha
+      attr_reader :start_sha
+      attr_reader :head_sha
+
+      def initialize(base_sha:, start_sha: base_sha, head_sha:)
+        @base_sha = base_sha
+        @start_sha = start_sha
+        @head_sha = head_sha
+      end
+
+      def ==(other)
+        other.is_a?(self.class) &&
+          base_sha == other.base_sha &&
+          start_sha == other.start_sha &&
+          head_sha == other.head_sha
+      end
+
+      # There is only one case in which we will have `start_sha` and `head_sha`,
+      # but not `base_sha`, which is when a diff is generated between an
+      # orphaned branch and another branch, which means there _is_ no base, but
+      # we're still able to highlight it, and to create diff notes, which are
+      # the primary things `DiffRefs` are used for.
+      # `DiffRefs` are "complete" when they have `start_sha` and `head_sha`,
+      # because `base_sha` can always be derived from this, to return an actual
+      # sha, or `nil`.
+      # We have `base_sha` directly available on `DiffRefs` because it's faster#
+      # than having to look it up in the repo every time.
+      def complete?
+        start_sha && head_sha
+      end
+    end
+  end
+end
diff --git a/lib/gitlab/diff/file.rb b/lib/gitlab/diff/file.rb
index d2e85cabf72..b0c50edba59 100644
--- a/lib/gitlab/diff/file.rb
+++ b/lib/gitlab/diff/file.rb
@@ -1,47 +1,83 @@
 module Gitlab
   module Diff
     class File
-      attr_reader :diff, :diff_refs
+      attr_reader :diff, :repository, :diff_refs
 
       delegate :new_file, :deleted_file, :renamed_file,
-        :old_path, :new_path, to: :diff, prefix: false
+        :old_path, :new_path, :a_mode, :b_mode,
+        :submodule?, :too_large?, to: :diff, prefix: false
 
-      def initialize(diff, diff_refs)
+      def initialize(diff, repository:, diff_refs: nil)
         @diff = diff
+        @repository = repository
         @diff_refs = diff_refs
       end
 
+      def position(line)
+        return unless diff_refs
+
+        Position.new(
+          old_path: old_path,
+          new_path: new_path,
+          old_line: line.old_line,
+          new_line: line.new_line,
+          diff_refs: diff_refs
+        )
+      end
+
+      def line_code(line)
+        return if line.meta?
+
+        Gitlab::Diff::LineCode.generate(file_path, line.new_pos, line.old_pos)
+      end
+
+      def line_for_line_code(code)
+        diff_lines.find { |line| line_code(line) == code }
+      end
+
+      def line_for_position(pos)
+        diff_lines.find { |line| position(line) == pos }
+      end
+
+      def position_for_line_code(code)
+        line = line_for_line_code(code)
+        position(line) if line
+      end
+
+      def line_code_for_position(pos)
+        line = line_for_position(pos)
+        line_code(line) if line
+      end
+
+      def content_commit
+        return unless diff_refs
+
+        repository.commit(deleted_file ? old_ref : new_ref)
+      end
+
       def old_ref
-        diff_refs[0] if diff_refs
+        diff_refs.try(:base_sha)
       end
 
       def new_ref
-        diff_refs[1] if diff_refs
+        diff_refs.try(:head_sha)
       end
 
-      # Array of Gitlab::DIff::Line objects
+      # Array of Gitlab::Diff::Line objects
       def diff_lines
-        @lines ||= parser.parse(raw_diff.each_line).to_a
-      end
-
-      def too_large?
-        diff.too_large?
+        @lines ||= Gitlab::Diff::Parser.new.parse(raw_diff.each_line).to_a
       end
 
       def highlighted_diff_lines
-        Gitlab::Diff::Highlight.new(self).highlight
+        @highlighted_diff_lines ||= Gitlab::Diff::Highlight.new(self, repository: self.repository).highlight
       end
 
       def parallel_diff_lines
-        Gitlab::Diff::ParallelDiff.new(self).parallelize
+        @parallel_diff_lines ||= Gitlab::Diff::ParallelDiff.new(self).parallelize
       end
 
       def mode_changed?
-        !!(diff.a_mode && diff.b_mode && diff.a_mode != diff.b_mode)
-      end
-
-      def parser
-        Gitlab::Diff::Parser.new
+        a_mode && b_mode && a_mode != b_mode
       end
 
       def raw_diff
@@ -53,17 +89,15 @@ module Gitlab
       end
 
       def prev_line(index)
-        if index > 0
-          diff_lines[index - 1]
-        end
+        diff_lines[index - 1] if index > 0
+      end
+
+      def paths
+        [old_path, new_path].compact
       end
 
       def file_path
-        if diff.new_path.present?
-          diff.new_path
-        elsif diff.old_path.present?
-          diff.old_path
-        end
+        new_path.presence || old_path
       end
 
       def added_lines
@@ -73,6 +107,21 @@ module Gitlab
       def removed_lines
         diff_lines.count(&:removed?)
       end
+
+      def old_blob(commit = content_commit)
+        return unless commit
+
+        parent_id = commit.parent_id
+        return unless parent_id
+
+        repository.blob_at(parent_id, old_path)
+      end
+
+      def blob(commit = content_commit)
+        return unless commit
+
+        repository.blob_at(commit.id, file_path)
+      end
     end
   end
 end
diff --git a/lib/gitlab/diff/highlight.rb b/lib/gitlab/diff/highlight.rb
index 9429b3ff88d..649a265a02c 100644
--- a/lib/gitlab/diff/highlight.rb
+++ b/lib/gitlab/diff/highlight.rb
@@ -1,11 +1,13 @@
 module Gitlab
   module Diff
     class Highlight
-      attr_reader :diff_file, :diff_lines, :raw_lines
+      attr_reader :diff_file, :diff_lines, :raw_lines, :repository
 
       delegate :old_path, :new_path, :old_ref, :new_ref, to: :diff_file, prefix: :diff
 
-      def initialize(diff_lines)
+      def initialize(diff_lines, repository: nil)
+        @repository = repository
+
         if diff_lines.is_a?(Gitlab::Diff::File)
           @diff_file = diff_lines
           @diff_lines = @diff_file.diff_lines
@@ -19,7 +21,7 @@ module Gitlab
         @diff_lines.map.with_index do |diff_line, i|
           diff_line = diff_line.dup
           # ignore highlighting for "match" lines
-          next diff_line if diff_line.type == 'match' || diff_line.type == 'nonewline'
+          next diff_line if diff_line.meta?
 
           rich_line = highlight_line(diff_line) || diff_line.text
 
@@ -40,12 +42,12 @@ module Gitlab
 
         line_prefix = diff_line.text.match(/\A(.)/) ? $1 : ' '
 
-        case diff_line.type
-        when 'new', nil
-          rich_line = new_lines[diff_line.new_pos - 1]
-        when 'old'
-          rich_line = old_lines[diff_line.old_pos - 1]
-        end
+        rich_line =
+          if diff_line.unchanged? || diff_line.added?
+            new_lines[diff_line.new_pos - 1]
+          elsif diff_line.removed?
+            old_lines[diff_line.old_pos - 1]
+          end
 
         # Only update text if line is found. This will prevent
         # issues with submodules given the line only exists in diff content.
@@ -58,19 +60,12 @@ module Gitlab
 
       def old_lines
         return unless diff_file
-        @old_lines ||= Gitlab::Highlight.highlight_lines(*processing_args(:old))
+        @old_lines ||= Gitlab::Highlight.highlight_lines(self.repository, diff_old_ref, diff_old_path)
       end
 
       def new_lines
         return unless diff_file
-        @new_lines ||= Gitlab::Highlight.highlight_lines(*processing_args(:new))
-      end
-
-      def processing_args(version)
-        ref  = send("diff_#{version}_ref")
-        path = send("diff_#{version}_path")
-
-        [ref.project.repository, ref.id, path]
+        @new_lines ||= Gitlab::Highlight.highlight_lines(self.repository, diff_new_ref, diff_new_path)
       end
     end
   end
diff --git a/lib/gitlab/diff/line.rb b/lib/gitlab/diff/line.rb
index 03730b435ad..c6189d660c2 100644
--- a/lib/gitlab/diff/line.rb
+++ b/lib/gitlab/diff/line.rb
@@ -9,6 +9,18 @@ module Gitlab
         @old_pos, @new_pos = old_pos, new_pos
       end
 
+      def old_line
+        old_pos unless added? || meta?
+      end
+
+      def new_line
+        new_pos unless removed? || meta?
+      end
+
+      def unchanged?
+        type.nil?
+      end
+
       def added?
         type == 'new'
       end
@@ -16,6 +28,10 @@ module Gitlab
       def removed?
         type == 'old'
       end
+
+      def meta?
+        type == 'match' || type == 'nonewline'
+      end
     end
   end
 end
diff --git a/lib/gitlab/diff/line_mapper.rb b/lib/gitlab/diff/line_mapper.rb
new file mode 100644
index 00000000000..576a761423e
--- /dev/null
+++ b/lib/gitlab/diff/line_mapper.rb
@@ -0,0 +1,64 @@
+# When provided a diff for a specific file, maps old line numbers to new line
+# numbers and back, to find out where a specific line in a file was moved by the
+# changes.
+module Gitlab
+  module Diff
+    class LineMapper
+      attr_accessor :diff_file
+
+      def initialize(diff_file)
+        @diff_file = diff_file
+      end
+
+      # Find new line number for old line number.
+      def old_to_new(old_line)
+        map_line_number(old_line, from: :old_line, to: :new_line)
+      end
+
+      # Find old line number for new line number.
+      def new_to_old(new_line)
+        map_line_number(new_line, from: :new_line, to: :old_line)
+      end
+
+      private
+
+      def diff_lines
+        @diff_lines ||= @diff_file.diff_lines
+      end
+
+      # Find old/new line number based on its old/new counterpart line number.
+      def map_line_number(from_line, from:, to:)
+        # If no diff file could be found, the file wasn't changed, and the
+        # mapped line number is the same as the specified line number.
+        return from_line unless diff_file
+
+        # To find the mapped line number for the specified line number,
+        # we need to find:
+        # - The diff line with that exact line number, if it is in the diff context
+        # - The first diff line with a higher line number, if it falls between diff contexts
+        # - The last known diff line, if it falls after the last diff context
+        diff_line = diff_lines.find do |diff_line|
+          diff_from_line = diff_line.send(from)
+          diff_from_line && diff_from_line >= from_line
+        end
+        diff_line ||= diff_lines.last
+
+        # If no diff line could be found, the file wasn't changed, and the
+        # mapped line number is the same as the specified line number.
+        return from_line unless diff_line
+
+        diff_from_line = diff_line.send(from)
+        diff_to_line = diff_line.send(to)
+
+        # If the line was removed, there is no mapped line number.
+        return unless diff_to_line
+
+        # Because we may not have the diff line with the exact line number
+        # we were looking for, we need to adjust the mapped line number.
+        distance = diff_from_line - from_line
+
+        diff_to_line - distance
+      end
+    end
+  end
+end
diff --git a/lib/gitlab/diff/parallel_diff.rb b/lib/gitlab/diff/parallel_diff.rb
index 74f9b3c050a..1c1fc148123 100644
--- a/lib/gitlab/diff/parallel_diff.rb
+++ b/lib/gitlab/diff/parallel_diff.rb
@@ -15,17 +15,19 @@ module Gitlab
         highlighted_diff_lines.each do |line|
           full_line = line.text
           type = line.type
-          line_code = generate_line_code(diff_file.file_path, line)
+          line_code = diff_file.line_code(line)
           line_new = line.new_pos
           line_old = line.old_pos
+          position = diff_file.position(line)
 
           next_line = diff_file.next_line(line.index)
 
           if next_line
             next_line = highlighted_diff_lines[next_line.index]
-            next_line_code = generate_line_code(diff_file.file_path, next_line)
+            full_next_line = next_line.text
+            next_line_code = diff_file.line_code(next_line)
             next_type = next_line.type
-            next_line = next_line.text
+            next_position = diff_file.position(next_line)
           end
 
           case type
@@ -37,12 +39,14 @@ module Gitlab
                 number:     line_old,
                 text:       full_line,
                 line_code:  line_code,
+                position:   position
               },
               right: {
                 type:       type,
                 number:     line_new,
                 text:       full_line,
-                line_code:  line_code
+                line_code:  line_code,
+                position:   position
               }
             }
           when 'old'
@@ -55,12 +59,14 @@ module Gitlab
                   number:     line_old,
                   text:       full_line,
                   line_code:  line_code,
+                  position:   position
                 },
                 right: {
                   type:       next_type,
                   number:     line_new,
-                  text:       next_line,
-                  line_code:  next_line_code
+                  text:       full_next_line,
+                  line_code:  next_line_code,
+                  position:   next_position,
                 }
               }
               skip_next = true
@@ -73,12 +79,14 @@ module Gitlab
                   number:     line_old,
                   text:       full_line,
                   line_code:  line_code,
+                  position:   position
                 },
                 right: {
                   type:       next_type,
                   number:     nil,
                   text:       "",
-                  line_code:  nil
+                  line_code:  nil,
+                  position:   nil
                 }
               }
             end
@@ -95,12 +103,14 @@ module Gitlab
                   number:     nil,
                   text:       "",
                   line_code:  line_code,
+                  position:   position
                 },
                 right: {
                   type:       type,
                   number:     line_new,
                   text:       full_line,
-                  line_code:  line_code
+                  line_code:  line_code,
+                  position:   position
                 }
               }
             end
@@ -108,12 +118,6 @@ module Gitlab
         end
         lines
       end
-
-      private
-
-      def generate_line_code(file_path, line)
-        Gitlab::Diff::LineCode.generate(file_path, line.new_pos, line.old_pos)
-      end
     end
   end
 end
diff --git a/lib/gitlab/diff/position.rb b/lib/gitlab/diff/position.rb
new file mode 100644
index 00000000000..989fff8918e
--- /dev/null
+++ b/lib/gitlab/diff/position.rb
@@ -0,0 +1,155 @@
+# Defines a specific location, identified by paths and line numbers,
+# within a specific diff, identified by start, head and base commit ids.
+module Gitlab
+  module Diff
+    class Position
+      attr_reader :old_path
+      attr_reader :new_path
+      attr_reader :old_line
+      attr_reader :new_line
+      attr_reader :base_sha
+      attr_reader :start_sha
+      attr_reader :head_sha
+
+      def initialize(attrs = {})
+        @old_path = attrs[:old_path]
+        @new_path = attrs[:new_path]
+        @old_line = attrs[:old_line]
+        @new_line = attrs[:new_line]
+
+        if attrs[:diff_refs]
+          @base_sha  = attrs[:diff_refs].base_sha
+          @start_sha = attrs[:diff_refs].start_sha
+          @head_sha  = attrs[:diff_refs].head_sha
+        else
+          @base_sha  = attrs[:base_sha]
+          @start_sha = attrs[:start_sha]
+          @head_sha  = attrs[:head_sha]
+        end
+      end
+
+      # `Gitlab::Diff::Position` objects are stored as serialized attributes in
+      # `DiffNote`, which use YAML to encode and decode objects.
+      # `#init_with` and `#encode_with` can be used to customize the en/decoding
+      # behavior. In this case, we override these to prevent memoized instance
+      # variables like `@diff_file` and `@diff_line` from being serialized.
+      def init_with(coder)
+        initialize(coder['attributes'])
+
+        self
+      end
+
+      def encode_with(coder)
+        coder['attributes'] = self.to_h
+      end
+
+      def key
+        @key ||= [base_sha, start_sha, head_sha, Digest::SHA1.hexdigest(old_path || ""), Digest::SHA1.hexdigest(new_path || ""), old_line, new_line]
+      end
+
+      def ==(other)
+        other.is_a?(self.class) && key == other.key
+      end
+
+      def to_h
+        {
+          old_path: old_path,
+          new_path: new_path,
+          old_line: old_line,
+          new_line: new_line,
+          base_sha:  base_sha,
+          start_sha: start_sha,
+          head_sha:  head_sha
+        }
+      end
+
+      def inspect
+        %(#<#{self.class}:#{object_id} #{to_h}>)
+      end
+
+      def complete?
+        file_path.present? &&
+          (old_line || new_line) &&
+          diff_refs.complete?
+      end
+
+      def to_json
+        JSON.generate(self.to_h)
+      end
+
+      def type
+        if old_line && new_line
+          nil
+        elsif new_line
+          'new'
+        else
+          'old'
+        end
+      end
+
+      def unchanged?
+        type.nil?
+      end
+
+      def added?
+        type == 'new'
+      end
+
+      def removed?
+        type == 'old'
+      end
+
+      def paths
+        [old_path, new_path].compact.uniq
+      end
+
+      def file_path
+        new_path.presence || old_path
+      end
+
+      def diff_refs
+        @diff_refs ||= DiffRefs.new(base_sha: base_sha, start_sha: start_sha, head_sha: head_sha)
+      end
+
+      def diff_file(repository)
+        @diff_file ||= begin
+          if RequestStore.active?
+            key = {
+              project_id: repository.project.id,
+              start_sha: start_sha,
+              head_sha: head_sha,
+              path: file_path
+            }
+
+            RequestStore.fetch(key) { find_diff_file(repository) }
+          else
+            find_diff_file(repository)
+          end
+        end
+      end
+
+      def diff_line(repository)
+        @diff_line ||= diff_file(repository).line_for_position(self)
+      end
+
+      def line_code(repository)
+        @line_code ||= diff_file(repository).line_code_for_position(self)
+      end
+
+      private
+
+      def find_diff_file(repository)
+        diffs = Gitlab::Git::Compare.new(
+          repository.raw_repository,
+          start_sha,
+          head_sha
+        ).diffs(paths: paths)
+
+        diff = diffs.first
+        return unless diff
+
+        Gitlab::Diff::File.new(diff, repository: repository, diff_refs: diff_refs)
+      end
+    end
+  end
+end
diff --git a/lib/gitlab/diff/position_tracer.rb b/lib/gitlab/diff/position_tracer.rb
new file mode 100644
index 00000000000..4d04f867268
--- /dev/null
+++ b/lib/gitlab/diff/position_tracer.rb
@@ -0,0 +1,168 @@
+# Finds the diff position in the new diff that corresponds to the same location
+# specified by the provided position in the old diff.
+module Gitlab
+  module Diff
+    class PositionTracer
+      attr_accessor :repository
+      attr_accessor :old_diff_refs
+      attr_accessor :new_diff_refs
+      attr_accessor :paths
+
+      def initialize(repository:, old_diff_refs:, new_diff_refs:, paths: nil)
+        @repository = repository
+        @old_diff_refs = old_diff_refs
+        @new_diff_refs = new_diff_refs
+        @paths = paths
+      end
+
+      def trace(old_position)
+        return unless old_diff_refs.complete? && new_diff_refs.complete?
+        return unless old_position.diff_refs == old_diff_refs
+
+        # Suppose we have an MR with source branch `feature` and target branch `master`.
+        # When the MR was created, the head of `master` was commit A, and the
+        # head of `feature` was commit B, resulting in the original diff A->B.
+        # Since creation, `master` was updated to C.
+        # Now `feature` is being updated to D, and the newly generated MR diff is C->D.
+        # It is possible that C and D are direct decendants of A and B respectively,
+        # but this isn't necessarily the case as rebases and merges come into play.
+        #
+        # Suppose we have a diff note on the original diff A->B. Now that the MR
+        # is updated, we need to find out what line in C->D corresponds to the
+        # line the note was originally created on, so that we can update the diff note's
+        # records and continue to display it in the right place in the diffs.
+        # If we cannot find this line in the new diff, this means the diff note is now
+        # outdated, and we will display that fact to the user.
+        #
+        # In the new diff, the file the diff note was originally created on may
+        # have been renamed, deleted or even created, if the file existed in A and B,
+        # but was removed in C, and restored in D.
+        #
+        # Every diff note stores a Position object that defines a specific location,
+        # identified by paths and line numbers, within a specific diff, identified
+        # by start, head and base commit ids.
+        #
+        # For diff notes for diff A->B, the position looks like this:
+        # Position
+        #   base_sha - ID of commit A
+        #   head_sha - ID of commit B
+        #   old_path - path as of A (nil if file was newly created)
+        #   new_path - path as of B (nil if file was deleted)
+        #   old_line - line number as of A (nil if file was newly created)
+        #   new_line - line number as of B (nil if file was deleted)
+        #
+        # We can easily update `base_sha` and `head_sha` to hold the IDs of commits C and D,
+        # but need to find the paths and line numbers as of C and D.
+        #
+        # If the file was unchanged or newly created in A->B, the path as of D can be found
+        # by generating diff B->D ("head to head"), finding the diff file with
+        # `diff_file.old_path == position.new_path`, and taking `diff_file.new_path`.
+        # The path as of C can be found by taking diff C->D, finding the diff file
+        # with that same `new_path` and taking `diff_file.old_path`.
+        # The line number as of D can be found by using the LineMapper on diff B->D
+        # and providing the line number as of B.
+        # The line number as of C can be found by using the LineMapper on diff C->D
+        # and providing the line number as of D.
+        #
+        # If the file was deleted in A->B, the path as of C can be found
+        # by generating diff A->C ("base to base"), finding the diff file with
+        # `diff_file.old_path == position.old_path`, and taking `diff_file.new_path`.
+        # The path as of D can be found by taking diff C->D, finding the diff file
+        # with that same `old_path` and taking `diff_file.new_path`.
+        # The line number as of C can be found by using the LineMapper on diff A->C
+        # and providing the line number as of A.
+        # The line number as of D can be found by using the LineMapper on diff C->D
+        # and providing the line number as of C.
+
+        results = nil
+        results ||= trace_added_line(old_position)   if old_position.added?   || old_position.unchanged?
+        results ||= trace_removed_line(old_position) if old_position.removed? || old_position.unchanged?
+
+        return unless results
+
+        file_diff, old_line, new_line = results
+
+        Position.new(
+          old_path: file_diff.old_path,
+          new_path: file_diff.new_path,
+          head_sha: new_diff_refs.head_sha,
+          start_sha: new_diff_refs.start_sha,
+          base_sha: new_diff_refs.base_sha,
+          old_line: old_line,
+          new_line: new_line
+        )
+      end
+
+      private
+
+      def trace_added_line(old_position)
+        file_path = old_position.new_path
+
+        return unless diff_head_to_head
+
+        file_head_to_head = diff_head_to_head.find { |diff_file| diff_file.old_path == file_path }
+
+        file_path = file_head_to_head.new_path if file_head_to_head
+
+        new_line = LineMapper.new(file_head_to_head).old_to_new(old_position.new_line)
+
+        return unless new_line
+
+        file_diff = new_diffs.find { |diff_file| diff_file.new_path == file_path }
+        return unless file_diff
+
+        old_line = LineMapper.new(file_diff).new_to_old(new_line)
+
+        [file_diff, old_line, new_line]
+      end
+
+      def trace_removed_line(old_position)
+        file_path = old_position.old_path
+
+        return unless diff_base_to_base
+
+        file_base_to_base = diff_base_to_base.find { |diff_file| diff_file.old_path == file_path }
+
+        file_path = file_base_to_base.old_path if file_base_to_base
+
+        old_line = LineMapper.new(file_base_to_base).old_to_new(old_position.old_line)
+
+        return unless old_line
+
+        file_diff = new_diffs.find { |diff_file| diff_file.old_path == file_path }
+        return unless file_diff
+
+        new_line = LineMapper.new(file_diff).old_to_new(old_line)
+
+        [file_diff, old_line, new_line]
+      end
+
+      def diff_base_to_base
+        @diff_base_to_base ||= diff_files(old_diff_refs.base_sha || old_diff_refs.start_sha, new_diff_refs.base_sha || new_diff_refs.start_sha)
+      end
+
+      def diff_head_to_head
+        @diff_head_to_head ||= diff_files(old_diff_refs.head_sha, new_diff_refs.head_sha)
+      end
+
+      def new_diffs
+        @new_diffs ||= diff_files(new_diff_refs.start_sha, new_diff_refs.head_sha, use_base: true)
+      end
+
+      def diff_files(start_sha, head_sha, use_base: false)
+        base_sha = self.repository.merge_base(start_sha, head_sha) || start_sha
+
+        diffs = self.repository.raw_repository.diff(
+          use_base ? base_sha : start_sha,
+          head_sha,
+          {},
+          *paths
+        )
+
+        diffs.decorate! do |diff|
+          Gitlab::Diff::File.new(diff, repository: self.repository)
+        end
+      end
+    end
+  end
+end
diff --git a/lib/gitlab/email/message/repository_push.rb b/lib/gitlab/email/message/repository_push.rb
index 047c77c6fc2..97701b0cd42 100644
--- a/lib/gitlab/email/message/repository_push.rb
+++ b/lib/gitlab/email/message/repository_push.rb
@@ -33,11 +33,15 @@ module Gitlab
         end
 
         def commits
-          @commits ||= (Commit.decorate(compare.commits, project) if compare)
+          return unless compare
+
+          @commits ||= Commit.decorate(compare.commits, project)
         end
 
         def diffs
-          @diffs ||= (safe_diff_files(compare.diffs(max_files: 30), diff_refs) if compare)
+          return unless compare
+          
+          @diffs ||= safe_diff_files(compare.diffs(max_files: 30), diff_refs: diff_refs, repository: project.repository)
         end
 
         def diffs_count
diff --git a/lib/gitlab/email/receiver.rb b/lib/gitlab/email/receiver.rb
index 97ef9851d71..1c671a7487b 100644
--- a/lib/gitlab/email/receiver.rb
+++ b/lib/gitlab/email/receiver.rb
@@ -104,15 +104,7 @@ module Gitlab
       end
 
       def create_note(reply)
-        Notes::CreateService.new(
-          sent_notification.project,
-          sent_notification.recipient,
-          note:           reply,
-          noteable_type:  sent_notification.noteable_type,
-          noteable_id:    sent_notification.noteable_id,
-          commit_id:      sent_notification.commit_id,
-          line_code:      sent_notification.line_code
-        ).execute
+        sent_notification.create_note(reply)
       end
     end
   end
diff --git a/lib/gitlab/github_import/branch_formatter.rb b/lib/gitlab/github_import/branch_formatter.rb
index a15fc84b418..7d2d545b84e 100644
--- a/lib/gitlab/github_import/branch_formatter.rb
+++ b/lib/gitlab/github_import/branch_formatter.rb
@@ -4,7 +4,7 @@ module Gitlab
       delegate :repo, :sha, :ref, to: :raw_data
 
       def exists?
-        project.repository.branch_exists?(ref)
+        branch_exists? && commit_exists?
       end
 
       def name
@@ -15,11 +15,15 @@ module Gitlab
         repo.present?
       end
 
-      def valid?
-        repo.present?
+      private
+
+      def branch_exists?
+        project.repository.branch_exists?(ref)
       end
 
-      private
+      def commit_exists?
+        project.repository.commit(sha).present?
+      end
 
       def short_id
         sha.to_s[0..7]
diff --git a/lib/gitlab/github_import/importer.rb b/lib/gitlab/github_import/importer.rb
index 730978d502b..3932fcb1eda 100644
--- a/lib/gitlab/github_import/importer.rb
+++ b/lib/gitlab/github_import/importer.rb
@@ -131,8 +131,10 @@ module Gitlab
       def clean_up_restored_branches(branches)
         branches.each do |name, _|
           client.delete_ref(repo, "heads/#{name}")
-          project.repository.rm_branch(project.creator, name)
+          project.repository.delete_branch(name) rescue Rugged::ReferenceError
         end
+
+        project.repository.after_remove_branch
       end
 
       def apply_labels(issuable)
diff --git a/lib/gitlab/github_import/pull_request_formatter.rb b/lib/gitlab/github_import/pull_request_formatter.rb
index 498b00cb658..a4ea2210abd 100644
--- a/lib/gitlab/github_import/pull_request_formatter.rb
+++ b/lib/gitlab/github_import/pull_request_formatter.rb
@@ -11,10 +11,10 @@ module Gitlab
           description: description,
           source_project: source_branch_project,
           source_branch: source_branch_name,
-          head_source_sha: source_branch_sha,
+          source_branch_sha: source_branch_sha,
           target_project: target_branch_project,
           target_branch: target_branch_name,
-          base_target_sha: target_branch_sha,
+          target_branch_sha: target_branch_sha,
           state: state,
           milestone: milestone,
           author_id: author_id,
diff --git a/lib/gitlab/import_export/command_line_util.rb b/lib/gitlab/import_export/command_line_util.rb
index 78664f076eb..2249904145c 100644
--- a/lib/gitlab/import_export/command_line_util.rb
+++ b/lib/gitlab/import_export/command_line_util.rb
@@ -28,7 +28,8 @@ module Gitlab
       end
 
       def execute(cmd)
-        _output, status = Gitlab::Popen.popen(cmd)
+        output, status = Gitlab::Popen.popen(cmd)
+        @shared.error(Gitlab::ImportExport::Error.new(output.to_s)) unless status.zero?
         status.zero?
       end
 
diff --git a/lib/gitlab/import_export/saver.rb b/lib/gitlab/import_export/saver.rb
index f38229c6c59..6a60b65071f 100644
--- a/lib/gitlab/import_export/saver.rb
+++ b/lib/gitlab/import_export/saver.rb
@@ -17,6 +17,7 @@ module Gitlab
           Rails.logger.info("Saved project export #{archive_file}")
           archive_file
         else
+          @shared.error(Gitlab::ImportExport::Error.new("Unable to save #{archive_file} into #{@shared.export_path}"))
           false
         end
       rescue => e
diff --git a/lib/gitlab/sidekiq_middleware/memory_killer.rb b/lib/gitlab/sidekiq_middleware/memory_killer.rb
index 4831c46c4be..104280f520a 100644
--- a/lib/gitlab/sidekiq_middleware/memory_killer.rb
+++ b/lib/gitlab/sidekiq_middleware/memory_killer.rb
@@ -29,11 +29,11 @@ module Gitlab
             "in #{GRACE_TIME} seconds"
           sleep(GRACE_TIME)
 
-          Sidekiq.logger.warn "sending SIGTERM to PID #{Process.pid}"
+          Sidekiq.logger.warn "sending SIGTERM to PID #{Process.pid} - Worker #{worker.class} - JID-#{job['jid']}"
           Process.kill('SIGTERM', Process.pid)
 
           Sidekiq.logger.warn "waiting #{SHUTDOWN_WAIT} seconds before sending "\
-            "#{SHUTDOWN_SIGNAL} to PID #{Process.pid}"
+            "#{SHUTDOWN_SIGNAL} to PID #{Process.pid} - Worker #{worker.class} - JID-#{job['jid']}"
           sleep(SHUTDOWN_WAIT)
 
           Sidekiq.logger.warn "sending #{SHUTDOWN_SIGNAL} to PID #{Process.pid} - Worker #{worker.class} - JID-#{job['jid']}"
diff --git a/lib/gitlab/timeless.rb b/lib/gitlab/timeless.rb
new file mode 100644
index 00000000000..b290c716f97
--- /dev/null
+++ b/lib/gitlab/timeless.rb
@@ -0,0 +1,16 @@
+module Gitlab
+  module Timeless
+    def self.timeless(model, &block)
+      original_record_timestamps = model.record_timestamps
+      model.record_timestamps = false
+
+      if block.arity.abs == 1
+        block.call(model)
+      else
+        block.call
+      end
+    ensure
+      model.record_timestamps = original_record_timestamps
+    end
+  end
+end
diff --git a/lib/gitlab/url_sanitizer.rb b/lib/gitlab/url_sanitizer.rb
index 7d02fe3c971..86ed18fb50d 100644
--- a/lib/gitlab/url_sanitizer.rb
+++ b/lib/gitlab/url_sanitizer.rb
@@ -6,8 +6,16 @@ module Gitlab
       content.gsub(regexp) { |url| new(url).masked_url }
     end
 
+    def self.valid?(url)
+      Addressable::URI.parse(url.strip)
+
+      true
+    rescue Addressable::URI::InvalidURIError
+      false
+    end
+
     def initialize(url, credentials: nil)
-      @url = Addressable::URI.parse(url)
+      @url = Addressable::URI.parse(url.strip)
       @credentials = credentials
     end
 
diff --git a/lib/gitlab/workhorse.rb b/lib/gitlab/workhorse.rb
index ef1241f8600..bc0193a6c32 100644
--- a/lib/gitlab/workhorse.rb
+++ b/lib/gitlab/workhorse.rb
@@ -38,12 +38,10 @@ module Gitlab
       end
 
       def send_git_diff(repository, diff_refs)
-        from, to = diff_refs
-
         params = {
           'RepoPath'  => repository.path_to_repo,
-          'ShaFrom'   => from.sha,
-          'ShaTo'     => to.sha
+          'ShaFrom'   => diff_refs.start_sha,
+          'ShaTo'     => diff_refs.head_sha
         }
 
         [
@@ -52,11 +50,11 @@ module Gitlab
         ]
       end
 
-      def send_git_patch(repository, from, to)
+      def send_git_patch(repository, diff_refs)
         params = {
           'RepoPath'  => repository.path_to_repo,
-          'ShaFrom'   => from,
-          'ShaTo'     => to
+          'ShaFrom'   => diff_refs.start_sha,
+          'ShaTo'     => diff_refs.head_sha
         }
 
         [
diff --git a/spec/controllers/admin/projects_controller_spec.rb b/spec/controllers/admin/projects_controller_spec.rb
index 4cb8b8da150..8eaacef2024 100644
--- a/spec/controllers/admin/projects_controller_spec.rb
+++ b/spec/controllers/admin/projects_controller_spec.rb
@@ -11,12 +11,12 @@ describe Admin::ProjectsController do
     render_views
 
     it 'retrieves the project for the given visibility level' do
-      get :index, visibility_levels: [Gitlab::VisibilityLevel::PUBLIC]
+      get :index, visibility_level: [Gitlab::VisibilityLevel::PUBLIC]
       expect(response.body).to match(project.name)
     end
 
     it 'does not retrieve the project' do
-      get :index, visibility_levels: [Gitlab::VisibilityLevel::INTERNAL]
+      get :index, visibility_level: [Gitlab::VisibilityLevel::INTERNAL]
       expect(response.body).not_to match(project.name)
     end
   end
diff --git a/spec/controllers/projects/merge_requests_controller_spec.rb b/spec/controllers/projects/merge_requests_controller_spec.rb
index eff74e12869..c4b57e77804 100644
--- a/spec/controllers/projects/merge_requests_controller_spec.rb
+++ b/spec/controllers/projects/merge_requests_controller_spec.rb
@@ -103,7 +103,7 @@ describe Projects::MergeRequestsController do
             id: merge_request.iid,
             format: :patch)
 
-        expect(response.headers['Gitlab-Workhorse-Send-Data']).to start_with("git-format-patch:")
+        expect(response.headers[Gitlab::Workhorse::SEND_DATA_HEADER]).to start_with("git-format-patch:")
       end
     end
   end
@@ -212,7 +212,7 @@ describe Projects::MergeRequestsController do
 
     context 'when the sha parameter matches the source SHA' do
       def merge_with_sha
-        post :merge, base_params.merge(sha: merge_request.source_sha)
+        post :merge, base_params.merge(sha: merge_request.diff_head_sha)
       end
 
       it 'returns :success' do
@@ -229,11 +229,11 @@ describe Projects::MergeRequestsController do
 
       context 'when merge_when_build_succeeds is passed' do
         def merge_when_build_succeeds
-          post :merge, base_params.merge(sha: merge_request.source_sha, merge_when_build_succeeds: '1')
+          post :merge, base_params.merge(sha: merge_request.diff_head_sha, merge_when_build_succeeds: '1')
         end
 
         before do
-          create(:ci_empty_pipeline, project: project, sha: merge_request.source_sha, ref: merge_request.source_branch)
+          create(:ci_empty_pipeline, project: project, sha: merge_request.diff_head_sha, ref: merge_request.source_branch)
         end
 
         it 'returns :merge_when_build_succeeds' do
diff --git a/spec/factories/notes.rb b/spec/factories/notes.rb
index 696cf276e57..83e38095feb 100644
--- a/spec/factories/notes.rb
+++ b/spec/factories/notes.rb
@@ -10,21 +10,46 @@ FactoryGirl.define do
     on_issue
 
     factory :note_on_commit,             traits: [:on_commit]
-    factory :note_on_commit_diff,        traits: [:on_commit, :on_diff], class: LegacyDiffNote
     factory :note_on_issue,              traits: [:on_issue], aliases: [:votable_note]
     factory :note_on_merge_request,      traits: [:on_merge_request]
-    factory :note_on_merge_request_diff, traits: [:on_merge_request, :on_diff], class: LegacyDiffNote
     factory :note_on_project_snippet,    traits: [:on_project_snippet]
     factory :system_note,                traits: [:system]
 
+    factory :legacy_diff_note_on_commit, traits: [:on_commit, :legacy_diff_note], class: LegacyDiffNote
+    factory :legacy_diff_note_on_merge_request, traits: [:on_merge_request, :legacy_diff_note], class: LegacyDiffNote
+
+    factory :diff_note_on_merge_request, traits: [:on_merge_request], class: DiffNote do
+      position do
+        Gitlab::Diff::Position.new(
+          old_path: "files/ruby/popen.rb",
+          new_path: "files/ruby/popen.rb",
+          old_line: nil,
+          new_line: 14,
+          diff_refs: noteable.diff_refs
+        )
+      end
+    end
+
+    factory :diff_note_on_commit, traits: [:on_commit], class: DiffNote do
+      position do
+        Gitlab::Diff::Position.new(
+          old_path: "files/ruby/popen.rb",
+          new_path: "files/ruby/popen.rb",
+          old_line: nil,
+          new_line: 14,
+          diff_refs: project.commit(commit_id).try(:diff_refs)
+        )
+      end
+    end
+
     trait :on_commit do
       noteable nil
-      noteable_id nil
       noteable_type 'Commit'
+      noteable_id nil
       commit_id RepoHelpers.sample_commit.id
     end
 
-    trait :on_diff do
+    trait :legacy_diff_note do
       line_code "0_184_184"
     end
 
diff --git a/spec/factories/notification_settings.rb b/spec/factories/notification_settings.rb
new file mode 100644
index 00000000000..b5e96d18b8f
--- /dev/null
+++ b/spec/factories/notification_settings.rb
@@ -0,0 +1,8 @@
+FactoryGirl.define do
+  factory :notification_setting do
+    source factory: :empty_project
+    user
+    level 3
+    events []
+  end
+end
diff --git a/spec/features/merge_requests/created_from_fork_spec.rb b/spec/features/merge_requests/created_from_fork_spec.rb
index b4d2201c729..f676200ecf3 100644
--- a/spec/features/merge_requests/created_from_fork_spec.rb
+++ b/spec/features/merge_requests/created_from_fork_spec.rb
@@ -30,7 +30,7 @@ feature 'Merge request created from fork' do
 
     given(:pipeline) do
       create(:ci_pipeline_with_two_job, project: fork_project,
-                                        sha: merge_request.last_commit.id,
+                                        sha: merge_request.diff_head_sha,
                                         ref: merge_request.source_branch)
     end
 
diff --git a/spec/features/merge_requests/merge_when_build_succeeds_spec.rb b/spec/features/merge_requests/merge_when_build_succeeds_spec.rb
index c5e6412d7bf..96f7b8c9932 100644
--- a/spec/features/merge_requests/merge_when_build_succeeds_spec.rb
+++ b/spec/features/merge_requests/merge_when_build_succeeds_spec.rb
@@ -12,7 +12,7 @@ feature 'Merge When Build Succeeds', feature: true, js: true do
   end
 
   context "Active build for Merge Request" do
-    let!(:pipeline) { create(:ci_pipeline, project: project, sha: merge_request.last_commit.id, ref: merge_request.source_branch) }
+    let!(:pipeline) { create(:ci_pipeline, project: project, sha: merge_request.diff_head_sha, ref: merge_request.source_branch) }
     let!(:ci_build) { create(:ci_build, pipeline: pipeline) }
 
     before do
@@ -47,7 +47,7 @@ feature 'Merge When Build Succeeds', feature: true, js: true do
                                                   merge_user: user, title: "MepMep", merge_when_build_succeeds: true)
     end
 
-    let!(:pipeline) { create(:ci_pipeline, project: project, sha: merge_request.last_commit.id, ref: merge_request.source_branch) }
+    let!(:pipeline) { create(:ci_pipeline, project: project, sha: merge_request.diff_head_sha, ref: merge_request.source_branch) }
     let!(:ci_build) { create(:ci_build, pipeline: pipeline) }
 
     before do
diff --git a/spec/features/merge_requests/only_allow_merge_if_build_succeeds.rb b/spec/features/merge_requests/only_allow_merge_if_build_succeeds.rb
index 65e9185ec24..80e8b8fc642 100644
--- a/spec/features/merge_requests/only_allow_merge_if_build_succeeds.rb
+++ b/spec/features/merge_requests/only_allow_merge_if_build_succeeds.rb
@@ -19,7 +19,7 @@ feature 'Only allow merge requests to be merged if the build succeeds', feature:
   end
 
   context 'when project has CI enabled' do
-    let(:pipeline) { create(:ci_empty_pipeline, project: project, sha: merge_request.last_commit.id, ref: merge_request.source_branch) }
+    let(:pipeline) { create(:ci_empty_pipeline, project: project, sha: merge_request.diff_head_sha, ref: merge_request.source_branch) }
 
     context 'when merge requests can only be merged if the build succeeds' do
       before do
diff --git a/spec/features/notes_on_merge_requests_spec.rb b/spec/features/notes_on_merge_requests_spec.rb
index bb53475bf6c..61eec0afbee 100644
--- a/spec/features/notes_on_merge_requests_spec.rb
+++ b/spec/features/notes_on_merge_requests_spec.rb
@@ -166,12 +166,14 @@ describe 'Comments', feature: true do
           click_diff_line
 
           is_expected.
-            to have_css("tr[id='#{line_code}'] + .js-temp-notes-holder form",
+            to have_css("form[data-line-code='#{line_code}']",
                         count: 1)
         end
 
         it 'should be removed when canceled' do
-          page.within(".diff-file form[id$='#{line_code}-true']") do
+          is_expected.to have_css('.js-temp-notes-holder')
+
+          page.within("form[data-line-code='#{line_code}']") do
             find('.js-close-discussion-note-form').trigger('click')
           end
 
diff --git a/spec/features/pipelines_spec.rb b/spec/features/pipelines_spec.rb
index 98703ef3ac4..e7ee0aaea3c 100644
--- a/spec/features/pipelines_spec.rb
+++ b/spec/features/pipelines_spec.rb
@@ -123,7 +123,7 @@ describe "Pipelines" do
     before { visit namespace_project_pipeline_path(project.namespace, project, pipeline) }
 
     it 'showing a list of builds' do
-      expect(page).to have_content('Tests')
+      expect(page).to have_content('Test')
       expect(page).to have_content(@success.id)
       expect(page).to have_content('Deploy')
       expect(page).to have_content(@failed.id)
diff --git a/spec/features/projects/files/gitlab_ci_yml_dropdown_spec.rb b/spec/features/projects/files/gitlab_ci_yml_dropdown_spec.rb
index b8c06c383fb..fca40f68b01 100644
--- a/spec/features/projects/files/gitlab_ci_yml_dropdown_spec.rb
+++ b/spec/features/projects/files/gitlab_ci_yml_dropdown_spec.rb
@@ -19,12 +19,12 @@ feature 'User wants to add a .gitlab-ci.yml file', feature: true do
     find('.js-gitlab-ci-yml-selector').click
     wait_for_ajax
     within '.gitlab-ci-yml-selector' do
-      find('.dropdown-input-field').set('jekyll')
-      find('.dropdown-content li', text: 'jekyll').click
+      find('.dropdown-input-field').set('Jekyll')
+      find('.dropdown-content li', text: 'Jekyll').click
     end
     wait_for_ajax
 
-    expect(page).to have_css('.gitlab-ci-yml-selector .dropdown-toggle-text', text: 'jekyll')
+    expect(page).to have_css('.gitlab-ci-yml-selector .dropdown-toggle-text', text: 'Jekyll')
     expect(page).to have_content('This file is a template, and might need editing before it works on your project')
     expect(page).to have_content('jekyll build -d test')
   end
diff --git a/spec/features/projects/import_export/import_file_spec.rb b/spec/features/projects/import_export/import_file_spec.rb
index 9d66f76ef58..bc3bf53fe9d 100644
--- a/spec/features/projects/import_export/import_file_spec.rb
+++ b/spec/features/projects/import_export/import_file_spec.rb
@@ -42,6 +42,23 @@ feature 'project import', feature: true, js: true do
     expect(project.import_status).to eq('finished')
   end
 
+  scenario 'invalid project' do
+    project = create(:project, namespace_id: 2)
+
+    visit new_project_path
+
+    select2('2', from: '#project_namespace_id')
+    fill_in :project_path, with: project.name, visible: true
+    click_link 'GitLab export'
+
+    attach_file('file', file)
+    click_on 'Import project'
+
+    page.within('.flash-container') do
+      expect(page).to have_content('Project could not be imported')
+    end
+  end
+
   def wiki_exists?
     wiki = ProjectWiki.new(project)
     File.exist?(wiki.repository.path_to_repo) && !wiki.repository.empty?
diff --git a/spec/fixtures/parallel_diff_result.yml b/spec/fixtures/parallel_diff_result.yml
index a8b7907d4ba..7d01183e3ef 100644
--- a/spec/fixtures/parallel_diff_result.yml
+++ b/spec/fixtures/parallel_diff_result.yml
@@ -3,322 +3,818 @@
     :type: match
     :number: 6
     :text: "@@ -6,12 +6,18 @@ module Popen"
-    :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_6_6
+    :line_code:
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line:
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: match
     :number: 6
     :text: "@@ -6,12 +6,18 @@ module Popen"
-    :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_6_6
+    :line_code:
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line:
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 6
     :text: |2
        <span id="LC6" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_6_6
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 6
+        :new_line: 6
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 6
     :text: |2
        <span id="LC6" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_6_6
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 6
+        :new_line: 6
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 7
     :text: |2
        <span id="LC7" class="line">  <span class="k">def</span> <span class="nf">popen</span><span class="p">(</span><span class="n">cmd</span><span class="p">,</span> <span class="n">path</span><span class="o">=</span><span class="kp">nil</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_7_7
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 7
+        :new_line: 7
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 7
     :text: |2
        <span id="LC7" class="line">  <span class="k">def</span> <span class="nf">popen</span><span class="p">(</span><span class="n">cmd</span><span class="p">,</span> <span class="n">path</span><span class="o">=</span><span class="kp">nil</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_7_7
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 7
+        :new_line: 7
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 8
     :text: |2
        <span id="LC8" class="line">    <span class="k">unless</span> <span class="n">cmd</span><span class="p">.</span><span class="nf">is_a?</span><span class="p">(</span><span class="no">Array</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_8_8
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 8
+        :new_line: 8
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 8
     :text: |2
        <span id="LC8" class="line">    <span class="k">unless</span> <span class="n">cmd</span><span class="p">.</span><span class="nf">is_a?</span><span class="p">(</span><span class="no">Array</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_8_8
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 8
+        :new_line: 8
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type: old
     :number: 9
     :text: |
       -<span id="LC9" class="line">      <span class="k">raise</span> <span class="s2">&quot;System commands must be given as an array of strings&quot;</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_9_9
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 9
+        :new_line:
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 9
     :text: |
       +<span id="LC9" class="line">      <span class="k">raise</span> <span class="no"><span class='idiff left'>RuntimeError</span></span><span class="p"><span class='idiff'>,</span></span><span class='idiff right'> </span><span class="s2">&quot;System commands must be given as an array of strings&quot;</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_10_9
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 9
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 10
     :text: |2
        <span id="LC10" class="line">    <span class="k">end</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_10_10
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 10
+        :new_line: 10
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 10
     :text: |2
        <span id="LC10" class="line">    <span class="k">end</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_10_10
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 10
+        :new_line: 10
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 11
     :text: |2
        <span id="LC11" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_11_11
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 11
+        :new_line: 11
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 11
     :text: |2
        <span id="LC11" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_11_11
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 11
+        :new_line: 11
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 12
     :text: |2
        <span id="LC12" class="line">    <span class="n">path</span> <span class="o">||=</span> <span class="no">Dir</span><span class="p">.</span><span class="nf">pwd</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_12_12
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 12
+        :new_line: 12
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 12
     :text: |2
        <span id="LC12" class="line">    <span class="n">path</span> <span class="o">||=</span> <span class="no">Dir</span><span class="p">.</span><span class="nf">pwd</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_12_12
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 12
+        :new_line: 12
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type: old
     :number: 13
     :text: |
       -<span id="LC13" class="line">    <span class="n">vars</span> <span class="o">=</span> <span class="p">{</span> <span class="s2">&quot;PWD&quot;</span> <span class="o">=&gt;</span> <span class="n">path</span> <span class="p">}</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_13_13
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 13
+        :new_line:
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: old
     :number:
     :text: ''
     :line_code:
+    :position:
 - :left:
     :type: old
     :number: 14
     :text: |
       -<span id="LC14" class="line">    <span class="n">options</span> <span class="o">=</span> <span class="p">{</span> <span class="ss">chdir: </span><span class="n">path</span> <span class="p">}</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_14_13
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 14
+        :new_line:
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 13
     :text: |
       +<span id="LC13" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_13
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 13
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number:
     :text: ''
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_14
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 14
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 14
     :text: |
       +<span id="LC14" class="line">    <span class="n">vars</span> <span class="o">=</span> <span class="p">{</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_14
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 14
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number:
     :text: ''
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_15
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 15
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 15
     :text: |
       +<span id="LC15" class="line">      <span class="s2">&quot;PWD&quot;</span> <span class="o">=&gt;</span> <span class="n">path</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_15
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 15
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number:
     :text: ''
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_16
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 16
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 16
     :text: |
       +<span id="LC16" class="line">    <span class="p">}</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_16
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
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 - :left:
     :type:
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+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
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+        :new_path: files/ruby/popen.rb
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   :right:
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     :text: |
       +<span id="LC17" class="line"></span>
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+    :position: !ruby/object:Gitlab::Diff::Position
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+        :new_path: files/ruby/popen.rb
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+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
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 - :left:
     :type:
     :number:
     :text: ''
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_18
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 18
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 18
     :text: |
       +<span id="LC18" class="line">    <span class="n">options</span> <span class="o">=</span> <span class="p">{</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_18
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
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+        :new_path: files/ruby/popen.rb
+        :old_line:
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+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number:
     :text: ''
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_19
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
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+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
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+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 19
     :text: |
       +<span id="LC19" class="line">      <span class="ss">chdir: </span><span class="n">path</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_19
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 19
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number:
     :text: ''
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_20
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 20
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 20
     :text: |
       +<span id="LC20" class="line">    <span class="p">}</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_20
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 20
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 15
     :text: |2
        <span id="LC21" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_21
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 15
+        :new_line: 21
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
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     :number: 21
     :text: |2
        <span id="LC21" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_15_21
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
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+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
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+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
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     :text: |2
        <span id="LC22" class="line">    <span class="k">unless</span> <span class="no">File</span><span class="p">.</span><span class="nf">directory?</span><span class="p">(</span><span class="n">path</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_16_22
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 16
+        :new_line: 22
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 22
     :text: |2
        <span id="LC22" class="line">    <span class="k">unless</span> <span class="no">File</span><span class="p">.</span><span class="nf">directory?</span><span class="p">(</span><span class="n">path</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_16_22
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
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+        :new_line: 22
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
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+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 17
     :text: |2
        <span id="LC23" class="line">      <span class="no">FileUtils</span><span class="p">.</span><span class="nf">mkdir_p</span><span class="p">(</span><span class="n">path</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_17_23
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
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+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
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     :number: 23
     :text: |2
        <span id="LC23" class="line">      <span class="no">FileUtils</span><span class="p">.</span><span class="nf">mkdir_p</span><span class="p">(</span><span class="n">path</span><span class="p">)</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_17_23
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 17
+        :new_line: 23
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type: match
     :number: 19
     :text: "@@ -19,6 +25,7 @@ module Popen"
-    :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_19_25
+    :line_code:
+    :position: !ruby/object:Gitlab::Diff::Position
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+        :new_path: files/ruby/popen.rb
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+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: match
     :number: 25
     :text: "@@ -19,6 +25,7 @@ module Popen"
-    :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_19_25
+    :line_code:
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
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+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line:
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
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     :text: |2
        <span id="LC25" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_19_25
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 19
+        :new_line: 25
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
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     :number: 25
     :text: |2
        <span id="LC25" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_19_25
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 19
+        :new_line: 25
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 20
     :text: |2
        <span id="LC26" class="line">    <span class="vi">@cmd_output</span> <span class="o">=</span> <span class="s2">&quot;&quot;</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_20_26
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 20
+        :new_line: 26
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 26
     :text: |2
        <span id="LC26" class="line">    <span class="vi">@cmd_output</span> <span class="o">=</span> <span class="s2">&quot;&quot;</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_20_26
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 20
+        :new_line: 26
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 21
     :text: |2
        <span id="LC27" class="line">    <span class="vi">@cmd_status</span> <span class="o">=</span> <span class="mi">0</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_21_27
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 21
+        :new_line: 27
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
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+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
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     :number: 27
     :text: |2
        <span id="LC27" class="line">    <span class="vi">@cmd_status</span> <span class="o">=</span> <span class="mi">0</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_21_27
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 21
+        :new_line: 27
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
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+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number:
     :text: ''
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_22_28
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 28
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type: new
     :number: 28
     :text: |
       +<span id="LC28" class="line"></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_22_28
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line:
+        :new_line: 28
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 22
     :text: |2
        <span id="LC29" class="line">    <span class="no">Open3</span><span class="p">.</span><span class="nf">popen3</span><span class="p">(</span><span class="n">vars</span><span class="p">,</span> <span class="o">*</span><span class="n">cmd</span><span class="p">,</span> <span class="n">options</span><span class="p">)</span> <span class="k">do</span> <span class="o">|</span><span class="n">stdin</span><span class="p">,</span> <span class="n">stdout</span><span class="p">,</span> <span class="n">stderr</span><span class="p">,</span> <span class="n">wait_thr</span><span class="o">|</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_22_29
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 22
+        :new_line: 29
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 29
     :text: |2
        <span id="LC29" class="line">    <span class="no">Open3</span><span class="p">.</span><span class="nf">popen3</span><span class="p">(</span><span class="n">vars</span><span class="p">,</span> <span class="o">*</span><span class="n">cmd</span><span class="p">,</span> <span class="n">options</span><span class="p">)</span> <span class="k">do</span> <span class="o">|</span><span class="n">stdin</span><span class="p">,</span> <span class="n">stdout</span><span class="p">,</span> <span class="n">stderr</span><span class="p">,</span> <span class="n">wait_thr</span><span class="o">|</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_22_29
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 22
+        :new_line: 29
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 23
     :text: |2
        <span id="LC30" class="line">      <span class="vi">@cmd_output</span> <span class="o">&lt;&lt;</span> <span class="n">stdout</span><span class="p">.</span><span class="nf">read</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_23_30
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 23
+        :new_line: 30
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 30
     :text: |2
        <span id="LC30" class="line">      <span class="vi">@cmd_output</span> <span class="o">&lt;&lt;</span> <span class="n">stdout</span><span class="p">.</span><span class="nf">read</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_23_30
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 23
+        :new_line: 30
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
 - :left:
     :type:
     :number: 24
     :text: |2
        <span id="LC31" class="line">      <span class="vi">@cmd_output</span> <span class="o">&lt;&lt;</span> <span class="n">stderr</span><span class="p">.</span><span class="nf">read</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_24_31
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 24
+        :new_line: 31
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
   :right:
     :type:
     :number: 31
     :text: |2
        <span id="LC31" class="line">      <span class="vi">@cmd_output</span> <span class="o">&lt;&lt;</span> <span class="n">stderr</span><span class="p">.</span><span class="nf">read</span></span>
     :line_code: 2f6fcd96b88b36ce98c38da085c795a27d92a3dd_24_31
+    :position: !ruby/object:Gitlab::Diff::Position
+      attributes:
+        :old_path: files/ruby/popen.rb
+        :new_path: files/ruby/popen.rb
+        :old_line: 24
+        :new_line: 31
+        :base_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :start_sha: 6f6d7e7ed97bb5f0054f2b1df789b39ca89b6ff9
+        :head_sha: 570e7b2abdd848b95f2f578043fc23bd6f6fd24d
diff --git a/spec/helpers/diff_helper_spec.rb b/spec/helpers/diff_helper_spec.rb
index a71dd53e6ed..7ea9fa933f0 100644
--- a/spec/helpers/diff_helper_spec.rb
+++ b/spec/helpers/diff_helper_spec.rb
@@ -9,7 +9,7 @@ describe DiffHelper do
   let(:diffs) { commit.diffs }
   let(:diff) { diffs.first }
   let(:diff_refs) { [commit.parent, commit] }
-  let(:diff_file) { Gitlab::Diff::File.new(diff, diff_refs) }
+  let(:diff_file) { Gitlab::Diff::File.new(diff, diff_refs: diff_refs, repository: repository) }
 
   describe 'diff_view' do
     it 'returns a valid value when cookie is set' do
diff --git a/spec/lib/banzai/filter/label_reference_filter_spec.rb b/spec/lib/banzai/filter/label_reference_filter_spec.rb
index f1064a701d8..9e3d2f5825d 100644
--- a/spec/lib/banzai/filter/label_reference_filter_spec.rb
+++ b/spec/lib/banzai/filter/label_reference_filter_spec.rb
@@ -104,6 +104,31 @@ describe Banzai::Filter::LabelReferenceFilter, lib: true do
     end
   end
 
+  context 'String-based single-word references with special characters' do
+    let(:label)     { create(:label, name: '?gfm&', project: project) }
+    let(:reference) { "#{Label.reference_prefix}#{label.name}" }
+
+    it 'links to a valid reference' do
+      doc = reference_filter("See #{reference}")
+
+      expect(doc.css('a').first.attr('href')).to eq urls.
+        namespace_project_issues_url(project.namespace, project, label_name: label.name)
+      expect(doc.text).to eq 'See ?gfm&'
+    end
+
+    it 'links with adjacent text' do
+      doc = reference_filter("Label (#{reference}.)")
+      expect(doc.to_html).to match(%r(\(<a.+><span.+>\?gfm&amp;</span></a>\.\)))
+    end
+
+    it 'ignores invalid label names' do
+      act = "Label #{Label.reference_prefix}#{label.name.reverse}"
+      exp = "Label #{Label.reference_prefix}&amp;mfg?"
+
+      expect(reference_filter(act).to_html).to eq exp
+    end
+  end
+
   context 'String-based multi-word references in quotes' do
     let(:label)     { create(:label, name: 'gfm references', project: project) }
     let(:reference) { label.to_reference(format: :name) }
@@ -128,6 +153,31 @@ describe Banzai::Filter::LabelReferenceFilter, lib: true do
     end
   end
 
+  context 'String-based multi-word references with special characters in quotes' do
+    let(:label)     { create(:label, name: 'gfm & references?', project: project) }
+    let(:reference) { label.to_reference(format: :name) }
+
+    it 'links to a valid reference' do
+      doc = reference_filter("See #{reference}")
+
+      expect(doc.css('a').first.attr('href')).to eq urls.
+        namespace_project_issues_url(project.namespace, project, label_name: label.name)
+      expect(doc.text).to eq 'See gfm & references?'
+    end
+
+    it 'links with adjacent text' do
+      doc = reference_filter("Label (#{reference}.)")
+      expect(doc.to_html).to match(%r(\(<a.+><span.+>gfm &amp; references\?</span></a>\.\)))
+    end
+
+    it 'ignores invalid label names' do
+      act = %(Label #{Label.reference_prefix}"#{label.name.reverse}")
+      exp = %(Label #{Label.reference_prefix}"?secnerefer &amp; mfg\")
+
+      expect(reference_filter(act).to_html).to eq exp
+    end
+  end
+
   describe 'edge cases' do
     it 'gracefully handles non-references matching the pattern' do
       exp = act = '(format nil "~0f" 3.0) ; 3.0'
diff --git a/spec/lib/gitlab/diff/file_spec.rb b/spec/lib/gitlab/diff/file_spec.rb
index a0cbef6e6a4..1cb513d5229 100644
--- a/spec/lib/gitlab/diff/file_spec.rb
+++ b/spec/lib/gitlab/diff/file_spec.rb
@@ -6,7 +6,7 @@ describe Gitlab::Diff::File, lib: true do
   let(:project) { create(:project) }
   let(:commit) { project.commit(sample_commit.id) }
   let(:diff) { commit.diffs.first }
-  let(:diff_file) { Gitlab::Diff::File.new(diff, [commit.parent, commit]) }
+  let(:diff_file) { Gitlab::Diff::File.new(diff, diff_refs: commit.diff_refs, repository: project.repository) }
 
   describe :diff_lines do
     let(:diff_lines) { diff_file.diff_lines }
diff --git a/spec/lib/gitlab/diff/highlight_spec.rb b/spec/lib/gitlab/diff/highlight_spec.rb
index d19bf4ac84b..fb5d50a5c68 100644
--- a/spec/lib/gitlab/diff/highlight_spec.rb
+++ b/spec/lib/gitlab/diff/highlight_spec.rb
@@ -6,11 +6,11 @@ describe Gitlab::Diff::Highlight, lib: true do
   let(:project) { create(:project) }
   let(:commit) { project.commit(sample_commit.id) }
   let(:diff) { commit.diffs.first }
-  let(:diff_file) { Gitlab::Diff::File.new(diff, [commit.parent, commit]) }
+  let(:diff_file) { Gitlab::Diff::File.new(diff, diff_refs: commit.diff_refs, repository: project.repository) }
 
   describe '#highlight' do
     context "with a diff file" do
-      let(:subject) { Gitlab::Diff::Highlight.new(diff_file).highlight }
+      let(:subject) { Gitlab::Diff::Highlight.new(diff_file, repository: project.repository).highlight }
 
       it 'should return Gitlab::Diff::Line elements' do
         expect(subject.first).to be_an_instance_of(Gitlab::Diff::Line)
@@ -41,7 +41,7 @@ describe Gitlab::Diff::Highlight, lib: true do
     end
 
     context "with diff lines" do
-      let(:subject) { Gitlab::Diff::Highlight.new(diff_file.diff_lines).highlight }
+      let(:subject) { Gitlab::Diff::Highlight.new(diff_file.diff_lines, repository: project.repository).highlight }
 
       it 'should return Gitlab::Diff::Line elements' do
         expect(subject.first).to be_an_instance_of(Gitlab::Diff::Line)
diff --git a/spec/lib/gitlab/diff/line_mapper_spec.rb b/spec/lib/gitlab/diff/line_mapper_spec.rb
new file mode 100644
index 00000000000..4e50e03bb7e
--- /dev/null
+++ b/spec/lib/gitlab/diff/line_mapper_spec.rb
@@ -0,0 +1,137 @@
+require 'spec_helper'
+
+describe Gitlab::Diff::LineMapper, lib: true do
+  include RepoHelpers
+
+  let(:project) { create(:project) }
+  let(:repository) { project.repository }
+  let(:commit) { project.commit(sample_commit.id) }
+  let(:diffs) { commit.diffs }
+  let(:diff) { diffs.first }
+  let(:diff_file) { Gitlab::Diff::File.new(diff, diff_refs: commit.diff_refs, repository: repository) }
+  subject { described_class.new(diff_file) }
+
+  describe '#old_to_new' do
+    context "with a diff file" do
+      let(:mapping) do
+        {
+          1 => 1,
+          2 => 2,
+          3 => 3,
+          4 => 4,
+          5 => 5,
+          6 => 6,
+          7 => 7,
+          8 => 8,
+          9 => nil,
+          # nil => 9,
+          10 => 10,
+          11 => 11,
+          12 => 12,
+          13 => nil,
+          14 => nil,
+          # nil => 15,
+          # nil => 16,
+          # nil => 17,
+          # nil => 18,
+          # nil => 19,
+          # nil => 20,
+          15 => 21,
+          16 => 22,
+          17 => 23,
+          18 => 24,
+          19 => 25,
+          20 => 26,
+          21 => 27,
+          # nil => 28,
+          22 => 29,
+          23 => 30,
+          24 => 31,
+          25 => 32,
+          26 => 33,
+          27 => 34,
+          28 => 35,
+          29 => 36,
+          30 => 37
+        }
+      end
+
+      it 'returns the new line number for the old line number' do
+        mapping.each do |old_line, new_line|
+          expect(subject.old_to_new(old_line)).to eq(new_line)
+        end
+      end
+    end
+
+    context "without a diff file" do
+      let(:diff_file) { nil }
+
+      it "returns the same line number" do
+        expect(subject.old_to_new(100)).to eq(100)
+      end
+    end
+  end
+
+  describe '#new_to_old' do
+    context "with a diff file" do
+      let(:mapping) do
+        {
+          1 => 1,
+          2 => 2,
+          3 => 3,
+          4 => 4,
+          5 => 5,
+          6 => 6,
+          7 => 7,
+          8 => 8,
+          # nil => 9,
+          9 => nil,
+          10 => 10,
+          11 => 11,
+          12 => 12,
+          # nil => 13,
+          # nil => 14,
+          13 => nil,
+          14 => nil,
+          15 => nil,
+          16 => nil,
+          17 => nil,
+          18 => nil,
+          19 => nil,
+          20 => nil,
+          21 => 15,
+          22 => 16,
+          23 => 17,
+          24 => 18,
+          25 => 19,
+          26 => 20,
+          27 => 21,
+          28 => nil,
+          29 => 22,
+          30 => 23,
+          31 => 24,
+          32 => 25,
+          33 => 26,
+          34 => 27,
+          35 => 28,
+          36 => 29,
+          37 => 30
+        }
+      end
+
+      it 'returns the old line number for the new line number' do
+        mapping.each do |new_line, old_line|
+          expect(subject.new_to_old(new_line)).to eq(old_line)
+        end
+      end
+    end
+
+    context "without a diff file" do
+      let(:diff_file) { nil }
+
+      it "returns the same line number" do
+        expect(subject.new_to_old(100)).to eq(100)
+      end
+    end
+  end
+end
diff --git a/spec/lib/gitlab/diff/parallel_diff_spec.rb b/spec/lib/gitlab/diff/parallel_diff_spec.rb
index 1c5bbc47120..5f76b70c6f5 100644
--- a/spec/lib/gitlab/diff/parallel_diff_spec.rb
+++ b/spec/lib/gitlab/diff/parallel_diff_spec.rb
@@ -8,8 +8,7 @@ describe Gitlab::Diff::ParallelDiff, lib: true do
   let(:commit) { project.commit(sample_commit.id) }
   let(:diffs) { commit.diffs }
   let(:diff) { diffs.first }
-  let(:diff_refs) { [commit.parent, commit] }
-  let(:diff_file) { Gitlab::Diff::File.new(diff, diff_refs) }
+  let(:diff_file) { Gitlab::Diff::File.new(diff, diff_refs: commit.diff_refs, repository: repository) }
   subject { described_class.new(diff_file) }
 
   let(:parallel_diff_result_array) { YAML.load_file("#{Rails.root}/spec/fixtures/parallel_diff_result.yml") }
diff --git a/spec/lib/gitlab/diff/position_spec.rb b/spec/lib/gitlab/diff/position_spec.rb
new file mode 100644
index 00000000000..cf28628cb96
--- /dev/null
+++ b/spec/lib/gitlab/diff/position_spec.rb
@@ -0,0 +1,341 @@
+require 'spec_helper'
+
+describe Gitlab::Diff::Position, lib: true do
+  include RepoHelpers
+
+  let(:project) { create(:project) }
+
+  describe "position for an added file" do
+    let(:commit) { project.commit("2ea1f3dec713d940208fb5ce4a38765ecb5d3f73") }
+
+    subject do
+      described_class.new(
+        old_path: "files/images/wm.svg",
+        new_path: "files/images/wm.svg",
+        old_line: nil,
+        new_line: 5,
+        diff_refs: commit.diff_refs
+      )
+    end
+
+    describe "#diff_file" do
+      it "returns the correct diff file" do
+        diff_file = subject.diff_file(project.repository)
+
+        expect(diff_file.new_file).to be true
+        expect(diff_file.new_path).to eq(subject.new_path)
+        expect(diff_file.diff_refs).to eq(subject.diff_refs)
+      end
+    end
+
+    describe "#diff_line" do
+      it "returns the correct diff line" do
+        diff_line = subject.diff_line(project.repository)
+
+        expect(diff_line.added?).to be true
+        expect(diff_line.new_line).to eq(subject.new_line)
+        expect(diff_line.text).to eq("+    <desc>Created with Sketch.</desc>")
+      end
+    end
+
+    describe "#line_code" do
+      it "returns the correct line code" do
+        line_code = Gitlab::Diff::LineCode.generate(subject.file_path, subject.new_line, 0)
+
+        expect(subject.line_code(project.repository)).to eq(line_code)
+      end
+    end
+  end
+
+  describe "position for a changed file" do
+    let(:commit) { project.commit("570e7b2abdd848b95f2f578043fc23bd6f6fd24d") }
+
+    describe "position for an added line" do
+      subject do
+        described_class.new(
+          old_path: "files/ruby/popen.rb",
+          new_path: "files/ruby/popen.rb",
+          old_line: nil,
+          new_line: 14,
+          diff_refs: commit.diff_refs
+        )
+      end
+
+      describe "#diff_file" do
+        it "returns the correct diff file" do
+          diff_file = subject.diff_file(project.repository)
+
+          expect(diff_file.old_path).to eq(subject.old_path)
+          expect(diff_file.new_path).to eq(subject.new_path)
+          expect(diff_file.diff_refs).to eq(subject.diff_refs)
+        end
+      end
+
+      describe "#diff_line" do
+        it "returns the correct diff line" do
+          diff_line = subject.diff_line(project.repository)
+
+          expect(diff_line.added?).to be true
+          expect(diff_line.new_line).to eq(subject.new_line)
+          expect(diff_line.text).to eq("+    vars = {")
+        end
+      end
+
+      describe "#line_code" do
+        it "returns the correct line code" do
+          line_code = Gitlab::Diff::LineCode.generate(subject.file_path, subject.new_line, 15)
+
+          expect(subject.line_code(project.repository)).to eq(line_code)
+        end
+      end
+    end
+
+    describe "position for an unchanged line" do
+      subject do
+        described_class.new(
+          old_path: "files/ruby/popen.rb",
+          new_path: "files/ruby/popen.rb",
+          old_line: 16,
+          new_line: 22,
+          diff_refs: commit.diff_refs
+        )
+      end
+
+      describe "#diff_file" do
+        it "returns the correct diff file" do
+          diff_file = subject.diff_file(project.repository)
+
+          expect(diff_file.old_path).to eq(subject.old_path)
+          expect(diff_file.new_path).to eq(subject.new_path)
+          expect(diff_file.diff_refs).to eq(subject.diff_refs)
+        end
+      end
+
+      describe "#diff_line" do
+        it "returns the correct diff line" do
+          diff_line = subject.diff_line(project.repository)
+
+          expect(diff_line.unchanged?).to be true
+          expect(diff_line.old_line).to eq(subject.old_line)
+          expect(diff_line.new_line).to eq(subject.new_line)
+          expect(diff_line.text).to eq("     unless File.directory?(path)")
+        end
+      end
+
+      describe "#line_code" do
+        it "returns the correct line code" do
+          line_code = Gitlab::Diff::LineCode.generate(subject.file_path, subject.new_line, subject.old_line)
+
+          expect(subject.line_code(project.repository)).to eq(line_code)
+        end
+      end
+    end
+
+    describe "position for a removed line" do
+      subject do
+        described_class.new(
+          old_path: "files/ruby/popen.rb",
+          new_path: "files/ruby/popen.rb",
+          old_line: 14,
+          new_line: nil,
+          diff_refs: commit.diff_refs
+        )
+      end
+
+      describe "#diff_file" do
+        it "returns the correct diff file" do
+          diff_file = subject.diff_file(project.repository)
+
+          expect(diff_file.old_path).to eq(subject.old_path)
+          expect(diff_file.new_path).to eq(subject.new_path)
+          expect(diff_file.diff_refs).to eq(subject.diff_refs)
+        end
+      end
+
+      describe "#diff_line" do
+        it "returns the correct diff line" do
+          diff_line = subject.diff_line(project.repository)
+
+          expect(diff_line.removed?).to be true
+          expect(diff_line.old_line).to eq(subject.old_line)
+          expect(diff_line.text).to eq("-    options = { chdir: path }")
+        end
+      end
+
+      describe "#line_code" do
+        it "returns the correct line code" do
+          line_code = Gitlab::Diff::LineCode.generate(subject.file_path, 13, subject.old_line)
+
+          expect(subject.line_code(project.repository)).to eq(line_code)
+        end
+      end
+    end
+  end
+
+  describe "position for a renamed file" do
+    let(:commit) { project.commit("6907208d755b60ebeacb2e9dfea74c92c3449a1f") }
+
+    describe "position for an added line" do
+      subject do
+        described_class.new(
+          old_path: "files/js/commit.js.coffee",
+          new_path: "files/js/commit.coffee",
+          old_line: nil,
+          new_line: 4,
+          diff_refs: commit.diff_refs
+        )
+      end
+
+      describe "#diff_file" do
+        it "returns the correct diff file" do
+          diff_file = subject.diff_file(project.repository)
+
+          expect(diff_file.old_path).to eq(subject.old_path)
+          expect(diff_file.new_path).to eq(subject.new_path)
+          expect(diff_file.diff_refs).to eq(subject.diff_refs)
+        end
+      end
+
+      describe "#diff_line" do
+        it "returns the correct diff line" do
+          diff_line = subject.diff_line(project.repository)
+
+          expect(diff_line.added?).to be true
+          expect(diff_line.new_line).to eq(subject.new_line)
+          expect(diff_line.text).to eq("+      new CommitFile(@)")
+        end
+      end
+
+      describe "#line_code" do
+        it "returns the correct line code" do
+          line_code = Gitlab::Diff::LineCode.generate(subject.file_path, subject.new_line, 5)
+
+          expect(subject.line_code(project.repository)).to eq(line_code)
+        end
+      end
+    end
+
+    describe "position for an unchanged line" do
+      subject do
+        described_class.new(
+          old_path: "files/js/commit.js.coffee",
+          new_path: "files/js/commit.coffee",
+          old_line: 3,
+          new_line: 3,
+          diff_refs: commit.diff_refs
+        )
+      end
+
+      describe "#diff_file" do
+        it "returns the correct diff file" do
+          diff_file = subject.diff_file(project.repository)
+
+          expect(diff_file.old_path).to eq(subject.old_path)
+          expect(diff_file.new_path).to eq(subject.new_path)
+          expect(diff_file.diff_refs).to eq(subject.diff_refs)
+        end
+      end
+
+      describe "#diff_line" do
+        it "returns the correct diff line" do
+          diff_line = subject.diff_line(project.repository)
+
+          expect(diff_line.unchanged?).to be true
+          expect(diff_line.old_line).to eq(subject.old_line)
+          expect(diff_line.new_line).to eq(subject.new_line)
+          expect(diff_line.text).to eq("     $('.files .diff-file').each ->")
+        end
+      end
+
+      describe "#line_code" do
+        it "returns the correct line code" do
+          line_code = Gitlab::Diff::LineCode.generate(subject.file_path, subject.new_line, subject.old_line)
+
+          expect(subject.line_code(project.repository)).to eq(line_code)
+        end
+      end
+    end
+
+    describe "position for a removed line" do
+      subject do
+        described_class.new(
+          old_path: "files/js/commit.js.coffee",
+          new_path: "files/js/commit.coffee",
+          old_line: 4,
+          new_line: nil,
+          diff_refs: commit.diff_refs
+        )
+      end
+
+      describe "#diff_file" do
+        it "returns the correct diff file" do
+          diff_file = subject.diff_file(project.repository)
+
+          expect(diff_file.old_path).to eq(subject.old_path)
+          expect(diff_file.new_path).to eq(subject.new_path)
+          expect(diff_file.diff_refs).to eq(subject.diff_refs)
+        end
+      end
+
+      describe "#diff_line" do
+        it "returns the correct diff line" do
+          diff_line = subject.diff_line(project.repository)
+
+          expect(diff_line.removed?).to be true
+          expect(diff_line.old_line).to eq(subject.old_line)
+          expect(diff_line.text).to eq("-      new CommitFile(this)")
+        end
+      end
+
+      describe "#line_code" do
+        it "returns the correct line code" do
+          line_code = Gitlab::Diff::LineCode.generate(subject.file_path, 4, subject.old_line)
+
+          expect(subject.line_code(project.repository)).to eq(line_code)
+        end
+      end
+    end
+  end
+
+  describe "position for a deleted file" do
+    let(:commit) { project.commit("8634272bfad4cf321067c3e94d64d5a253f8321d") }
+
+    subject do
+      described_class.new(
+        old_path: "LICENSE",
+        new_path: "LICENSE",
+        old_line: 3,
+        new_line: nil,
+        diff_refs: commit.diff_refs
+      )
+    end
+
+    describe "#diff_file" do
+      it "returns the correct diff file" do
+        diff_file = subject.diff_file(project.repository)
+
+        expect(diff_file.deleted_file).to be true
+        expect(diff_file.old_path).to eq(subject.old_path)
+        expect(diff_file.diff_refs).to eq(subject.diff_refs)
+      end
+    end
+
+    describe "#diff_line" do
+      it "returns the correct diff line" do
+        diff_line = subject.diff_line(project.repository)
+
+        expect(diff_line.removed?).to be true
+        expect(diff_line.old_line).to eq(subject.old_line)
+        expect(diff_line.text).to eq("-Copyright (c) 2014 gitlabhq")
+      end
+    end
+
+    describe "#line_code" do
+      it "returns the correct line code" do
+        line_code = Gitlab::Diff::LineCode.generate(subject.file_path, 0, subject.old_line)
+
+        expect(subject.line_code(project.repository)).to eq(line_code)
+      end
+    end
+  end
+end
diff --git a/spec/lib/gitlab/diff/position_tracer_spec.rb b/spec/lib/gitlab/diff/position_tracer_spec.rb
new file mode 100644
index 00000000000..08312e60f4a
--- /dev/null
+++ b/spec/lib/gitlab/diff/position_tracer_spec.rb
@@ -0,0 +1,1758 @@
+require 'spec_helper'
+
+describe Gitlab::Diff::PositionTracer, lib: true do
+  # Douwe's diary                                    New York City, 2016-06-28
+  # --------------------------------------------------------------------------
+  #
+  # Dear diary,
+  #
+  # Ideally, we would have a test for every single diff scenario that can
+  # occur and that the PositionTracer should correctly trace a position
+  # through, across the following variables:
+  #
+  # - Old diff file type: created, changed, renamed, deleted, unchanged (5)
+  # - Old diff line type: added, removed, unchanged (3)
+  # - New diff file type: created, changed, renamed, deleted, unchanged (5)
+  # - New diff line type: added, removed, unchanged (3)
+  # - Old-to-new diff line change: kept, moved, undone (3)
+  #
+  # This adds up to 5 * 3 * 5 * 3 * 3 = 675 different potential scenarios,
+  # and 675 different tests to cover them all. In reality, it would be fewer,
+  # since one cannot have a removed line in a created file diff, for example,
+  # but for the sake of this diary entry, let's be pessimistic.
+  #
+  # Writing these tests is a manual and time consuming process, as every test
+  # requires the manual construction or finding of a combination of diffs that
+  # create the exact diff scenario we are looking for, and can take between
+  # 1 and 10 minutes, depending on the farfetchedness of the scenario and
+  # complexity of creating it.
+  #
+  # This means that writing tests to cover all of these scenarios would end up
+  # taking between 11 and 112 hours in total, which I do not believe is the
+  # best use of my time.
+  #
+  # A better course of action would be to think of scenarios that are likely
+  # to occur, but also potentially tricky to trace correctly, and only cover
+  # those, with a few more obvious scenarios thrown in to cover our bases.
+  #
+  # Unfortunately, I only came to the above realization once I was about
+  # 1/5th of the way through the process of writing ALL THE SPECS, having
+  # already wasted about 3 hours trying to be thorough.
+  #
+  # I did find 2 bugs while writing those though, so that's good.
+  #
+  # In any case, all of this means that the tests below will be extremely
+  # (excessively, unjustifiably) thorough for scenarios where "the file was
+  # created in the old diff" and then drop off to comparitively lackluster
+  # testing of other scenarios.
+  #
+  # I did still try to cover most of the obvious and potentially tricky
+  # scenarios, though.
+
+  include RepoHelpers
+
+  let(:project) { create(:project) }
+  let(:current_user) { project.owner }
+  let(:repository) { project.repository }
+  let(:file_name) { "test-file" }
+  let(:new_file_name) { "#{file_name}-new" }
+  let(:second_file_name) { "#{file_name}-2" }
+  let(:branch_name) { "position-tracer-test" }
+
+  let(:old_diff_refs) { raise NotImplementedError }
+  let(:new_diff_refs) { raise NotImplementedError }
+  let(:old_position) { raise NotImplementedError }
+
+  let(:position_tracer) { described_class.new(repository: project.repository, old_diff_refs: old_diff_refs, new_diff_refs: new_diff_refs) }
+  subject { position_tracer.trace(old_position) }
+
+  def diff_refs(base_commit, head_commit)
+    Gitlab::Diff::DiffRefs.new(base_sha: base_commit.id, head_sha: head_commit.id)
+  end
+
+  def position(attrs = {})
+    attrs.reverse_merge!(
+      diff_refs: old_diff_refs
+    )
+    Gitlab::Diff::Position.new(attrs)
+  end
+
+  def expect_new_position(attrs, new_position = subject)
+    if attrs.nil?
+      expect(new_position).to be_nil
+    else
+      expect(new_position).not_to be_nil
+
+      expect(new_position.diff_refs).to eq(new_diff_refs)
+
+      attrs.each do |attr, value|
+        expect(new_position.send(attr)).to eq(value)
+      end
+    end
+  end
+
+  def create_branch(new_name, branch_name)
+    CreateBranchService.new(project, current_user).execute(new_name, branch_name)
+  end
+
+  def create_file(branch_name, file_name, content)
+    Files::CreateService.new(
+      project,
+      current_user,
+      source_branch: branch_name,
+      target_branch: branch_name,
+      commit_message: "Create file",
+      file_path: file_name,
+      file_content: content
+    ).execute
+    project.commit(branch_name)
+  end
+
+  def update_file(branch_name, file_name, content)
+    Files::UpdateService.new(
+      project,
+      current_user,
+      source_branch: branch_name,
+      target_branch: branch_name,
+      commit_message: "Update file",
+      file_path: file_name,
+      file_content: content
+    ).execute
+    project.commit(branch_name)
+  end
+
+  def delete_file(branch_name, file_name)
+    Files::DeleteService.new(
+      project,
+      current_user,
+      source_branch: branch_name,
+      target_branch: branch_name,
+      commit_message: "Delete file",
+      file_path: file_name
+    ).execute
+    project.commit(branch_name)
+  end
+
+  let(:initial_commit) do
+    create_branch(branch_name, "master")[:branch].name
+    project.commit(branch_name)
+  end
+
+  describe "#trace" do
+    describe "diff scenarios" do
+      let(:create_file_commit) do
+        initial_commit
+
+        create_file(
+          branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            A
+            B
+            C
+          CONTENT
+        )
+      end
+
+      let(:create_second_file_commit) do
+        create_file_commit
+
+        create_file(
+          branch_name,
+          second_file_name,
+          <<-CONTENT.strip_heredoc
+            D
+            E
+          CONTENT
+        )
+      end
+
+      let(:update_line_commit) do
+        create_second_file_commit
+
+        update_file(
+          branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            A
+            BB
+            C
+          CONTENT
+        )
+      end
+
+      let(:update_second_file_line_commit) do
+        update_line_commit
+
+        update_file(
+          branch_name,
+          second_file_name,
+          <<-CONTENT.strip_heredoc
+            D
+            EE
+          CONTENT
+        )
+      end
+
+      let(:move_line_commit) do
+        update_second_file_line_commit
+
+        update_file(
+          branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            BB
+            A
+            C
+          CONTENT
+        )
+      end
+
+      let(:add_second_file_line_commit) do
+        move_line_commit
+
+        update_file(
+          branch_name,
+          second_file_name,
+          <<-CONTENT.strip_heredoc
+            D
+            EE
+            F
+          CONTENT
+        )
+      end
+
+      let(:move_second_file_line_commit) do
+        add_second_file_line_commit
+
+        update_file(
+          branch_name,
+          second_file_name,
+          <<-CONTENT.strip_heredoc
+            D
+            F
+            EE
+          CONTENT
+        )
+      end
+
+      let(:delete_line_commit) do
+        move_second_file_line_commit
+
+        update_file(
+          branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            BB
+            A
+          CONTENT
+        )
+      end
+
+      let(:delete_second_file_line_commit) do
+        delete_line_commit
+
+        update_file(
+          branch_name,
+          second_file_name,
+          <<-CONTENT.strip_heredoc
+            D
+            F
+          CONTENT
+        )
+      end
+
+      let(:delete_file_commit) do
+        delete_second_file_line_commit
+
+        delete_file(branch_name, file_name)
+      end
+
+      let(:rename_file_commit) do
+        delete_file_commit
+
+        create_file(
+          branch_name,
+          new_file_name,
+          <<-CONTENT.strip_heredoc
+            BB
+            A
+          CONTENT
+        )
+      end
+
+      let(:update_line_again_commit) do
+        rename_file_commit
+
+        update_file(
+          branch_name,
+          new_file_name,
+          <<-CONTENT.strip_heredoc
+            BB
+            AA
+          CONTENT
+        )
+      end
+
+      let(:move_line_again_commit) do
+        update_line_again_commit
+
+        update_file(
+          branch_name,
+          new_file_name,
+          <<-CONTENT.strip_heredoc
+            AA
+            BB
+          CONTENT
+        )
+      end
+
+      let(:delete_line_again_commit) do
+        move_line_again_commit
+
+        update_file(
+          branch_name,
+          new_file_name,
+          <<-CONTENT.strip_heredoc
+            AA
+          CONTENT
+        )
+      end
+
+      context "when the file was created in the old diff" do
+        context "when the file is created in the new diff" do
+          context "when the position pointed at an added line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+              let(:new_diff_refs) { diff_refs(initial_commit, create_second_file_commit) }
+              let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+              # old diff:
+              #   1 + A
+              #   2 + B
+              #   3 + C
+              #
+              # new diff:
+              #   1 + A
+              #   2 + B
+              #   3 + C
+
+              it "returns the new position" do
+                expect_new_position(
+                  new_path: old_position.new_path,
+                  new_line: old_position.new_line
+                )
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + A
+                #   2 + B
+                #   3 + C
+                #
+                # new diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    new_line: old_position.new_line
+                  )
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+                #
+                # new diff:
+                #   1 + BB
+                #   2 + A
+                #   3 + C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    new_line: 1
+                  )
+                end
+              end
+
+              context "when that line was changed between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + B
+                #   3 + C
+                #
+                # new diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 3) }
+
+                # old diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+                #
+                # new diff:
+                #   1 + A
+                #   2 + BB
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+        end
+
+        context "when the file is changed in the new diff" do
+          context "when the position pointed at an added line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+              let(:new_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+              let(:old_position) { position(new_path: file_name, new_line: 1) }
+
+              # old diff:
+              #   1 + A
+              #   2 + BB
+              #   3 + C
+              #
+              # new diff:
+              # 1 1   A
+              # 2   - B
+              #   2 + BB
+              # 3 3   C
+
+              it "returns the new position" do
+                expect_new_position(
+                  new_path: old_position.new_path,
+                  new_line: old_position.new_line
+                )
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(update_line_commit, move_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 3) }
+
+                # old diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+                #
+                # new diff:
+                # 1   - A
+                # 2 1   BB
+                #   2 + A
+                # 3 3   C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    new_line: old_position.new_line
+                  )
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(update_line_commit, move_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+                #
+                # new diff:
+                # 1   - A
+                # 2 1   BB
+                #   2 + A
+                # 3 3   C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    new_line: 1
+                  )
+                end
+              end
+
+              context "when that line was changed between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+                let(:new_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + B
+                #   3 + C
+                #
+                # new diff:
+                # 1 1   A
+                # 2   - B
+                #   2 + BB
+                # 3 3   C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(move_line_commit, delete_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 3) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #   3 + C
+                #
+                # new diff:
+                # 1 1   BB
+                # 2 2   A
+                # 3   - C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+        end
+
+        context "when the file is renamed in the new diff" do
+          context "when the position pointed at an added line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+              let(:new_diff_refs) { diff_refs(delete_line_commit, rename_file_commit) }
+              let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+              # old diff:
+              #   1 + BB
+              #   2 + A
+              #
+              # new diff:
+              # file_name -> new_file_name
+              # 1 1   BB
+              # 2 2   A
+
+              it "returns the new position" do
+                expect_new_position(
+                  old_path: file_name,
+                  new_path: new_file_name,
+                  old_line: old_position.new_line,
+                  new_line: old_position.new_line
+                )
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+                let(:new_diff_refs) { diff_refs(delete_line_commit, update_line_again_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #
+                # new diff:
+                # file_name -> new_file_name
+                # 1 1   BB
+                # 2   - A
+                #   2 + AA
+
+                it "returns the new position" do
+                  expect_new_position(
+                    old_path: file_name,
+                    new_path: new_file_name,
+                    old_line: old_position.new_line,
+                    new_line: old_position.new_line
+                  )
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+                let(:new_diff_refs) { diff_refs(delete_line_commit, move_line_again_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #
+                # new diff:
+                # file_name -> new_file_name
+                #   1 + AA
+                # 1 2   BB
+                # 2   - A
+
+                it "returns the new position" do
+                  expect_new_position(
+                    old_path: file_name,
+                    new_path: new_file_name,
+                    old_line: 1,
+                    new_line: 2
+                  )
+                end
+              end
+
+              context "when that line was changed between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+                let(:new_diff_refs) { diff_refs(delete_line_commit, update_line_again_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #
+                # new diff:
+                # file_name -> new_file_name
+                # 1 1   BB
+                # 2   - A
+                #   2 + AA
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+                let(:new_diff_refs) { diff_refs(delete_line_commit, delete_line_again_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #
+                # new diff:
+                # file_name -> new_file_name
+                # 1   - BB
+                # 2   - A
+                #   1 + AA
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+        end
+
+        context "when the file is deleted in the new diff" do
+          context "when the position pointed at an added line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+              let(:new_diff_refs) { diff_refs(delete_line_commit, delete_file_commit) }
+              let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+              # old diff:
+              #   1 + BB
+              #   2 + A
+              #
+              # new diff:
+              # 1   - BB
+              # 2   - A
+
+              it "returns nil" do
+                expect(subject).to be_nil
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(delete_line_commit, delete_file_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #   3 + C
+                #
+                # new diff:
+                # 1   - BB
+                # 2   - A
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(move_line_commit, delete_file_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+                #
+                # new diff:
+                # 1   - BB
+                # 2   - A
+                # 3   - C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was changed between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+                let(:new_diff_refs) { diff_refs(update_line_commit, delete_file_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + B
+                #   3 + C
+                #
+                # new diff:
+                # 1   - A
+                # 2   - BB
+                # 3   - C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(delete_line_commit, delete_file_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 3) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #   3 + C
+                #
+                # new diff:
+                # 1   - BB
+                # 2   - A
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+        end
+
+        context "when the file is unchanged in the new diff" do
+          context "when the position pointed at an added line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+              let(:new_diff_refs) { diff_refs(create_file_commit, create_second_file_commit) }
+              let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+              # old diff:
+              #   1 + A
+              #   2 + B
+              #   3 + C
+              #
+              # new diff:
+              # 1 1   A
+              # 2 2   B
+              # 3 3   C
+
+              it "returns nil" do
+                expect(subject).to be_nil
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+                let(:new_diff_refs) { diff_refs(update_line_commit, update_second_file_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + A
+                #   2 + B
+                #   3 + C
+                #
+                # new diff:
+                # 1 1   A
+                # 2 2   BB
+                # 3 3   C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(move_line_commit, move_second_file_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+                #
+                # new diff:
+                # 1 1   BB
+                # 2 2   A
+                # 3 3   C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was changed between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+                let(:new_diff_refs) { diff_refs(update_line_commit, update_second_file_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 2) }
+
+                # old diff:
+                #   1 + A
+                #   2 + B
+                #   3 + C
+                #
+                # new diff:
+                # 1 1   A
+                # 2 2   BB
+                # 3 3   C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+
+              context "when that line was deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(delete_line_commit, delete_second_file_line_commit) }
+                let(:old_position) { position(new_path: file_name, new_line: 3) }
+
+                # old diff:
+                #   1 + BB
+                #   2 + A
+                #   3 + C
+                #
+                # new diff:
+                # 1 1   BB
+                # 2 2   A
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+        end
+      end
+
+      context "when the file was changed in the old diff" do
+        context "when the file is created in the new diff" do
+          context "when the position pointed at an added line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+              let(:new_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+              let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 2) }
+
+              # old diff:
+              # 1 1   A
+              # 2   - B
+              #   2 + BB
+              # 3 3   C
+              #
+              # new diff:
+              #   1 + A
+              #   2 + BB
+              #   3 + C
+
+              it "returns the new position" do
+                expect_new_position(
+                  new_path: old_position.new_path,
+                  old_line: nil,
+                  new_line: old_position.new_line
+                )
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + BB
+                # 1 2   A
+                # 2   - B
+                # 3 3   C
+                #
+                # new diff:
+                #   1 + BB
+                #   2 + A
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    old_line: nil,
+                    new_line: old_position.new_line
+                  )
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 2) }
+
+                # old diff:
+                # 1 1   A
+                # 2   - B
+                #   2 + BB
+                # 3 3   C
+                #
+                # new diff:
+                #   1 + BB
+                #   2 + A
+                #   3 + C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    old_line: nil,
+                    new_line: 1
+                  )
+                end
+              end
+
+              context "when that line was changed or deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, create_file_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + BB
+                # 1 2   A
+                # 2   - B
+                # 3 3   C
+                #
+                # new diff:
+                #   1 + A
+                #   2 + B
+                #   3 + C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+
+          context "when the position pointed at a deleted line in the old diff" do
+            let(:old_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+            let(:new_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+            let(:old_position) { position(old_path: file_name, new_path: file_name, old_line: 2) }
+
+            # old diff:
+            # 1 1   A
+            # 2   - B
+            #   2 + BB
+            # 3 3   C
+            #
+            # new diff:
+            #   1 + A
+            #   2 + BB
+            #   3 + C
+
+            it "returns nil" do
+              expect(subject).to be_nil
+            end
+          end
+
+          context "when the position pointed at an unchanged line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+              let(:new_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+              let(:old_position) { position(old_path: file_name, new_path: file_name, old_line: 1, new_line: 1) }
+
+              # old diff:
+              # 1 1   A
+              # 2   - B
+              #   2 + BB
+              # 3 3   C
+              #
+              # new diff:
+              #   1 + A
+              #   2 + BB
+              #   3 + C
+
+              it "returns the new position" do
+                expect_new_position(
+                  new_path: old_position.new_path,
+                  old_line: nil,
+                  new_line: old_position.new_line
+                )
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, move_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, old_line: 1, new_line: 2) }
+
+                # old diff:
+                #   1 + BB
+                # 1 2   A
+                # 2   - B
+                # 3 3   C
+                #
+                # new diff:
+                #   1 + BB
+                #   2 + A
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    old_line: nil,
+                    new_line: old_position.new_line
+                  )
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(move_line_commit, delete_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, update_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, old_line: 2, new_line: 2) }
+
+                # old diff:
+                # 1 1   BB
+                # 2 2   A
+                # 3   - C
+                #
+                # new diff:
+                #   1 + A
+                #   2 + BB
+                #   3 + C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    new_path: old_position.new_path,
+                    old_line: nil,
+                    new_line: 1
+                  )
+                end
+              end
+
+              context "when that line was changed or deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(initial_commit, delete_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, old_line: 3, new_line: 3) }
+
+                # old diff:
+                #   1 + BB
+                # 1 2   A
+                # 2   - B
+                # 3 3   C
+                #
+                # new diff:
+                #   1 + A
+                #   2 + B
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+        end
+
+        context "when the file is changed in the new diff" do
+          context "when the position pointed at an added line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+              let(:new_diff_refs) { diff_refs(create_file_commit, update_second_file_line_commit) }
+              let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 2) }
+
+              # old diff:
+              # 1 1   A
+              # 2   - B
+              #   2 + BB
+              # 3 3   C
+              #
+              # new diff:
+              # 1 1   A
+              # 2   - B
+              #   2 + BB
+              # 3 3   C
+
+              it "returns the new position" do
+                expect_new_position(
+                  old_path: old_position.old_path,
+                  new_path: old_position.new_path,
+                  old_line: nil,
+                  new_line: old_position.new_line
+                )
+              end
+            end
+
+            context "when the file's content was changed between the old and the new diff" do
+              context "when that line was unchanged between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(move_line_commit, delete_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + BB
+                # 1 2   A
+                # 2   - B
+                # 3 3   C
+                #
+                # new diff:
+                # 1 1   BB
+                # 2 2   A
+                # 3   - C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    old_path: old_position.old_path,
+                    new_path: old_position.new_path,
+                    old_line: 1,
+                    new_line: 1
+                  )
+                end
+              end
+
+              context "when that line was moved between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+                let(:new_diff_refs) { diff_refs(update_line_commit, move_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 2) }
+
+                # old diff:
+                # 1 1   A
+                # 2   - B
+                #   2 + BB
+                # 3 3   C
+                #
+                # new diff:
+                # 1   - A
+                # 2 1   BB
+                #   2 + A
+                # 3 3   C
+
+                it "returns the new position" do
+                  expect_new_position(
+                    old_path: old_position.old_path,
+                    new_path: old_position.new_path,
+                    old_line: 2,
+                    new_line: 1
+                  )
+                end
+              end
+
+              context "when that line was changed or deleted between the old and the new diff" do
+                let(:old_diff_refs) { diff_refs(create_file_commit, move_line_commit) }
+                let(:new_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+                let(:old_position) { position(old_path: file_name, new_path: file_name, new_line: 1) }
+
+                # old diff:
+                #   1 + BB
+                # 1 2   A
+                # 2   - B
+                # 3 3   C
+                #
+                # new diff:
+                # 1 1   A
+                # 2   - B
+                #   2 + BB
+                # 3 3   C
+
+                it "returns nil" do
+                  expect(subject).to be_nil
+                end
+              end
+            end
+          end
+
+          context "when the position pointed at a deleted line in the old diff" do
+            context "when the file's content was unchanged between the old and the new diff" do
+              let(:old_diff_refs) { diff_refs(create_file_commit, update_line_commit) }
+              let(:new_diff_refs) { diff_refs(create_file_commit, update_second_file_line_commit) }
+              let(:old_position) { position(old_path: file_name, new_path: file_name, old_line: 2) }
+
+              # old diff:
+              # 1 1   A
+              # 2   - B
+              #   2 + BB
+              # 3 3   C
+              #
+              # new diff:
+              # 1 1   A
+              # 2   - B
+              #   2 + BB
+              # 3 3   C
+
+              it "returns the new position" do
+                expect_new_position(
+                  old_path: old_position.old_path,
+                  new_path: old_position.new_path,
+                  old_line: old_position.old_line,
+                  new_line: nil
+                )
+              end
+            end
+          end
+        end
+      end
+    end
+  end
+
+  describe "typical use scenarios" do
+    let(:second_branch_name) { "#{branch_name}-2" }
+
+    def expect_positions(old_attrs, new_attrs)
+      old_positions = old_attrs.map do |old_attrs|
+        position(old_attrs)
+      end
+
+      new_positions = old_positions.map do |old_position|
+        position_tracer.trace(old_position)
+      end
+
+      new_positions.zip(new_attrs).each do |new_position, new_attrs|
+        expect_new_position(new_attrs, new_position)
+      end
+    end
+
+    let(:create_file_commit) do
+      initial_commit
+
+      create_file(
+        branch_name,
+        file_name,
+        <<-CONTENT.strip_heredoc
+          A
+          B
+          C
+          D
+          E
+          F
+        CONTENT
+      )
+    end
+
+    let(:second_create_file_commit) do
+      create_file_commit
+
+      create_branch(second_branch_name, branch_name)
+
+      update_file(
+        second_branch_name,
+        file_name,
+        <<-CONTENT.strip_heredoc
+          Z
+          Z
+          Z
+          A
+          B
+          C
+          D
+          E
+          F
+        CONTENT
+      )
+    end
+
+    let(:update_file_commit) do
+      second_create_file_commit
+
+      update_file(
+        branch_name,
+        file_name,
+        <<-CONTENT.strip_heredoc
+          A
+          C
+          DD
+          E
+          F
+          G
+        CONTENT
+      )
+    end
+
+    let(:update_file_again_commit) do
+      update_file_commit
+
+      update_file(
+        branch_name,
+        file_name,
+        <<-CONTENT.strip_heredoc
+          A
+          BB
+          C
+          D
+          E
+          FF
+          G
+        CONTENT
+      )
+    end
+
+    describe "simple push of new commit" do
+      let(:old_diff_refs) { diff_refs(create_file_commit, update_file_commit) }
+      let(:new_diff_refs) { diff_refs(create_file_commit, update_file_again_commit) }
+
+      # old diff:
+      # 1 1   A
+      # 2   - B
+      # 3 2   C
+      # 4   - D
+      #   3 + DD
+      # 5 4   E
+      # 6 5   F
+      #   6 + G
+      #
+      # new diff:
+      # 1 1   A
+      # 2   - B
+      #   2 + BB
+      # 3 3   C
+      # 4 4   D
+      # 5 5   E
+      # 6   - F
+      #   6 + FF
+      #   7 + G
+
+      it "returns the new positions" do
+        old_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 2 }, #   C
+          { old_path: file_name,                      old_line: 4              }, # - D
+          {                      new_path: file_name,              new_line: 3 }, # + DD
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 4 }, #   E
+          { old_path: file_name, new_path: file_name, old_line: 6, new_line: 5 }, #   F
+          {                      new_path: file_name,              new_line: 6 }, # + G
+        ]
+
+        new_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 },
+          { old_path: file_name,                      old_line: 2              },
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 3 },
+          { old_path: file_name,                      old_line: 4, new_line: 4 },
+          nil,
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 5 },
+          { old_path: file_name,                      old_line: 6              },
+          {                      new_path: file_name,              new_line: 7 },
+        ]
+
+        expect_positions(old_position_attrs, new_position_attrs)
+      end
+    end
+
+    describe "force push to overwrite last commit" do
+      let(:second_create_file_commit) do
+        create_file_commit
+
+        create_branch(second_branch_name, branch_name)
+
+        update_file(
+          second_branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            A
+            BB
+            C
+            D
+            E
+            FF
+            G
+          CONTENT
+        )
+      end
+
+      let(:old_diff_refs) { diff_refs(create_file_commit, update_file_commit) }
+      let(:new_diff_refs) { diff_refs(create_file_commit, second_create_file_commit) }
+
+      # old diff:
+      # 1 1   A
+      # 2   - B
+      # 3 2   C
+      # 4   - D
+      #   3 + DD
+      # 5 4   E
+      # 6 5   F
+      #   6 + G
+      #
+      # new diff:
+      # 1 1   A
+      # 2   - B
+      #   2 + BB
+      # 3 3   C
+      # 4 4   D
+      # 5 5   E
+      # 6   - F
+      #   6 + FF
+      #   7 + G
+
+      it "returns the new positions" do
+        old_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 2 }, #   C
+          { old_path: file_name,                      old_line: 4              }, # - D
+          {                      new_path: file_name,              new_line: 3 }, # + DD
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 4 }, #   E
+          { old_path: file_name, new_path: file_name, old_line: 6, new_line: 5 }, #   F
+          {                      new_path: file_name,              new_line: 6 }, # + G
+        ]
+
+        new_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 },
+          { old_path: file_name,                      old_line: 2              },
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 3 },
+          { old_path: file_name,                      old_line: 4, new_line: 4 },
+          nil,
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 5 },
+          { old_path: file_name,                      old_line: 6              },
+          {                      new_path: file_name,              new_line: 7 },
+        ]
+
+        expect_positions(old_position_attrs, new_position_attrs)
+      end
+    end
+
+    describe "force push to delete last commit" do
+      let(:old_diff_refs) { diff_refs(create_file_commit, update_file_again_commit) }
+      let(:new_diff_refs) { diff_refs(create_file_commit, update_file_commit) }
+
+      # old diff:
+      # 1 1   A
+      # 2   - B
+      #   2 + BB
+      # 3 3   C
+      # 4 4   D
+      # 5 5   E
+      # 6   - F
+      #   6 + FF
+      #   7 + G
+      #
+      # new diff:
+      # 1 1   A
+      # 2   - B
+      # 3 2   C
+      # 4   - D
+      #   3 + DD
+      # 5 4   E
+      # 6 5   F
+      #   6 + G
+
+      it "returns the new positions" do
+        old_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          {                      new_path: file_name,              new_line: 2 }, # + BB
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 3 }, #   C
+          { old_path: file_name, new_path: file_name, old_line: 4, new_line: 4 }, #   D
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 5 }, #   E
+          { old_path: file_name,                      old_line: 6              }, # - F
+          {                      new_path: file_name,              new_line: 6 }, # + FF
+          {                      new_path: file_name,              new_line: 7 }, # + G
+        ]
+
+        new_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 },
+          { old_path: file_name,                      old_line: 2              },
+          nil,
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 2 },
+          { old_path: file_name,                      old_line: 4              },
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 4 },
+          { old_path: file_name, new_path: file_name, old_line: 6, new_line: 5 },
+          nil,
+          {                      new_path: file_name,              new_line: 6 },
+        ]
+
+        expect_positions(old_position_attrs, new_position_attrs)
+      end
+    end
+
+    describe "rebase on top of target branch" do
+      let(:second_update_file_commit) do
+        update_file_commit
+
+        update_file(
+          second_branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            Z
+            Z
+            Z
+            A
+            C
+            DD
+            E
+            F
+            G
+          CONTENT
+        )
+      end
+
+      let(:update_file_again_commit) do
+        second_update_file_commit
+
+        update_file(
+          branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            A
+            BB
+            C
+            D
+            E
+            FF
+            G
+          CONTENT
+        )
+      end
+
+      let(:overwrite_update_file_again_commit) do
+        update_file_again_commit
+
+        update_file(
+          second_branch_name,
+          file_name,
+          <<-CONTENT.strip_heredoc
+            Z
+            Z
+            Z
+            A
+            BB
+            C
+            D
+            E
+            FF
+            G
+          CONTENT
+        )
+      end
+
+      let(:old_diff_refs) { diff_refs(create_file_commit, update_file_again_commit) }
+      let(:new_diff_refs) { diff_refs(create_file_commit, overwrite_update_file_again_commit) }
+
+      # old diff:
+      # 1 1   A
+      # 2   - B
+      #   2 + BB
+      # 3 3   C
+      # 4 4   D
+      # 5 5   E
+      # 6   - F
+      #   6 + FF
+      #   7 + G
+      #
+      # new diff:
+      #   1 + Z
+      #   2 + Z
+      #   3 + Z
+      # 1 4   A
+      # 2   - B
+      #   5 + BB
+      # 3 6   C
+      # 4 7   D
+      # 5 8   E
+      # 6   - F
+      #   9 + FF
+      #   0 + G
+
+      it "returns the new positions" do
+        old_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          {                      new_path: file_name,              new_line: 2 }, # + BB
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 3 }, #   C
+          { old_path: file_name, new_path: file_name, old_line: 4, new_line: 4 }, #   D
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 5 }, #   E
+          { old_path: file_name,                      old_line: 6              }, # - F
+          {                      new_path: file_name,              new_line: 6 }, # + FF
+          {                      new_path: file_name,              new_line: 7 }, # + G
+        ]
+
+        new_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 4 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          {                      new_path: file_name,              new_line: 5 }, # + BB
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 6 }, #   C
+          { old_path: file_name, new_path: file_name, old_line: 4, new_line: 7 }, #   D
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 8 }, #   E
+          { old_path: file_name,                      old_line: 6              }, # - F
+          {                      new_path: file_name,              new_line: 9 }, # + FF
+          {                      new_path: file_name,              new_line: 10 }, # + G
+        ]
+
+        expect_positions(old_position_attrs, new_position_attrs)
+      end
+    end
+
+    describe "merge of target branch" do
+      let(:merge_commit) do
+        update_file_again_commit
+
+        committer = repository.user_to_committer(current_user)
+
+        options = {
+          message: "Merge branches",
+          author: committer,
+          committer: committer
+        }
+
+        repository.merge(current_user, second_create_file_commit.sha, branch_name, options)
+        project.commit(branch_name)
+      end
+
+      let(:old_diff_refs) { diff_refs(create_file_commit, update_file_again_commit) }
+      let(:new_diff_refs) { diff_refs(create_file_commit, merge_commit) }
+
+      # old diff:
+      # 1 1   A
+      # 2   - B
+      #   2 + BB
+      # 3 3   C
+      # 4 4   D
+      # 5 5   E
+      # 6   - F
+      #   6 + FF
+      #   7 + G
+      #
+      # new diff:
+      #   1 + Z
+      #   2 + Z
+      #   3 + Z
+      # 1 4   A
+      # 2   - B
+      #   5 + BB
+      # 3 6   C
+      # 4 7   D
+      # 5 8   E
+      # 6   - F
+      #   9 + FF
+      #   0 + G
+
+      it "returns the new positions" do
+        old_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          {                      new_path: file_name,              new_line: 2 }, # + BB
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 3 }, #   C
+          { old_path: file_name, new_path: file_name, old_line: 4, new_line: 4 }, #   D
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 5 }, #   E
+          { old_path: file_name,                      old_line: 6              }, # - F
+          {                      new_path: file_name,              new_line: 6 }, # + FF
+          {                      new_path: file_name,              new_line: 7 }, # + G
+        ]
+
+        new_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 4 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          {                      new_path: file_name,              new_line: 5 }, # + BB
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 6 }, #   C
+          { old_path: file_name, new_path: file_name, old_line: 4, new_line: 7 }, #   D
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 8 }, #   E
+          { old_path: file_name,                      old_line: 6              }, # - F
+          {                      new_path: file_name,              new_line: 9 }, # + FF
+          {                      new_path: file_name,              new_line: 10 }, # + G
+        ]
+
+        expect_positions(old_position_attrs, new_position_attrs)
+      end
+    end
+
+    describe "changing target branch" do
+      let(:old_diff_refs) { diff_refs(create_file_commit, update_file_again_commit) }
+      let(:new_diff_refs) { diff_refs(update_file_commit, update_file_again_commit) }
+
+      # old diff:
+      # 1 1   A
+      # 2   - B
+      #   2 + BB
+      # 3 3   C
+      # 4 4   D
+      # 5 5   E
+      # 6   - F
+      #   6 + FF
+      #   7 + G
+      #
+      # new diff:
+      # 1 1   A
+      #   2 + BB
+      # 2 3   C
+      # 3   - DD
+      #   4 + D
+      # 4 5   E
+      # 5   - F
+      #   6 + FF
+      #   7   G
+
+      it "returns the new positions" do
+        old_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 }, #   A
+          { old_path: file_name,                      old_line: 2              }, # - B
+          {                      new_path: file_name,              new_line: 2 }, # + BB
+          { old_path: file_name, new_path: file_name, old_line: 3, new_line: 3 }, #   C
+          { old_path: file_name, new_path: file_name, old_line: 4, new_line: 4 }, #   D
+          { old_path: file_name, new_path: file_name, old_line: 5, new_line: 5 }, #   E
+          { old_path: file_name,                      old_line: 6              }, # - F
+          {                      new_path: file_name,              new_line: 6 }, # + FF
+          {                      new_path: file_name,              new_line: 7 }, # + G
+        ]
+
+        new_position_attrs = [
+          { old_path: file_name, new_path: file_name, old_line: 1, new_line: 1 },
+          nil,
+          {                      new_path: file_name,              new_line: 2 },
+          { old_path: file_name, new_path: file_name, old_line: 2, new_line: 3 },
+          {                      new_path: file_name,              new_line: 4 },
+          { old_path: file_name, new_path: file_name, old_line: 4, new_line: 5 },
+          { old_path: file_name,                      old_line: 5              },
+          {                      new_path: file_name,              new_line: 6 },
+          {                      new_path: file_name,              new_line: 7 },
+        ]
+
+        expect_positions(old_position_attrs, new_position_attrs)
+      end
+    end
+  end
+end
diff --git a/spec/lib/gitlab/github_import/branch_formatter_spec.rb b/spec/lib/gitlab/github_import/branch_formatter_spec.rb
index 3cb634ba010..fc9d5204148 100644
--- a/spec/lib/gitlab/github_import/branch_formatter_spec.rb
+++ b/spec/lib/gitlab/github_import/branch_formatter_spec.rb
@@ -2,17 +2,18 @@ require 'spec_helper'
 
 describe Gitlab::GithubImport::BranchFormatter, lib: true do
   let(:project) { create(:project) }
+  let(:commit) { create(:commit, project: project) }
   let(:repo) { double }
   let(:raw) do
     {
       ref: 'feature',
       repo: repo,
-      sha: '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b'
+      sha: commit.id
     }
   end
 
   describe '#exists?' do
-    it 'returns true when branch exists' do
+    it 'returns true when both branch, and commit exists' do
       branch = described_class.new(project, double(raw))
 
       expect(branch.exists?).to eq true
@@ -23,6 +24,12 @@ describe Gitlab::GithubImport::BranchFormatter, lib: true do
 
       expect(branch.exists?).to eq false
     end
+
+    it 'returns false when commit does not exist' do
+      branch = described_class.new(project, double(raw.merge(sha: '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b')))
+
+      expect(branch.exists?).to eq false
+    end
   end
 
   describe '#name' do
@@ -33,7 +40,7 @@ describe Gitlab::GithubImport::BranchFormatter, lib: true do
     end
 
     it 'returns formatted ref when branch does not exist' do
-      branch = described_class.new(project, double(raw.merge(ref: 'removed-branch')))
+      branch = described_class.new(project, double(raw.merge(ref: 'removed-branch', sha: '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b')))
 
       expect(branch.name).to eq 'removed-branch-2e5d3239'
     end
@@ -51,18 +58,18 @@ describe Gitlab::GithubImport::BranchFormatter, lib: true do
     it 'returns raw sha' do
       branch = described_class.new(project, double(raw))
 
-      expect(branch.sha).to eq '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b'
+      expect(branch.sha).to eq commit.id
     end
   end
 
   describe '#valid?' do
-    it 'returns true when repository exists' do
+    it 'returns true when raw repo is present' do
       branch = described_class.new(project, double(raw))
 
       expect(branch.valid?).to eq true
     end
 
-    it 'returns false when repository does not exist' do
+    it 'returns false when raw repo is blank' do
       branch = described_class.new(project, double(raw.merge(repo: nil)))
 
       expect(branch.valid?).to eq false
diff --git a/spec/lib/gitlab/github_import/pull_request_formatter_spec.rb b/spec/lib/gitlab/github_import/pull_request_formatter_spec.rb
index 120f59e6e71..79931ecd134 100644
--- a/spec/lib/gitlab/github_import/pull_request_formatter_spec.rb
+++ b/spec/lib/gitlab/github_import/pull_request_formatter_spec.rb
@@ -2,11 +2,13 @@ require 'spec_helper'
 
 describe Gitlab::GithubImport::PullRequestFormatter, lib: true do
   let(:project) { create(:project) }
+  let(:source_sha) { create(:commit, project: project).id }
+  let(:target_sha) { create(:commit, project: project, git_commit: RepoHelpers.another_sample_commit).id }
   let(:repository) { double(id: 1, fork: false) }
   let(:source_repo) { repository }
-  let(:source_branch) { double(ref: 'feature', repo: source_repo, sha: '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b') }
+  let(:source_branch) { double(ref: 'feature', repo: source_repo, sha: source_sha) }
   let(:target_repo) { repository }
-  let(:target_branch) { double(ref: 'master', repo: target_repo, sha: '8ffb3c15a5475e59ae909384297fede4badcb4c7') }
+  let(:target_branch) { double(ref: 'master', repo: target_repo, sha: target_sha) }
   let(:octocat) { double(id: 123456, login: 'octocat') }
   let(:created_at) { DateTime.strptime('2011-01-26T19:01:12Z') }
   let(:updated_at) { DateTime.strptime('2011-01-27T19:01:12Z') }
@@ -41,10 +43,10 @@ describe Gitlab::GithubImport::PullRequestFormatter, lib: true do
           description: "*Created by: octocat*\n\nPlease pull these awesome changes",
           source_project: project,
           source_branch: 'feature',
-          head_source_sha: '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b',
+          source_branch_sha: source_sha,
           target_project: project,
           target_branch: 'master',
-          base_target_sha: '8ffb3c15a5475e59ae909384297fede4badcb4c7',
+          target_branch_sha: target_sha,
           state: 'opened',
           milestone: nil,
           author_id: project.creator_id,
@@ -68,10 +70,10 @@ describe Gitlab::GithubImport::PullRequestFormatter, lib: true do
           description: "*Created by: octocat*\n\nPlease pull these awesome changes",
           source_project: project,
           source_branch: 'feature',
-          head_source_sha: '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b',
+          source_branch_sha: source_sha,
           target_project: project,
           target_branch: 'master',
-          base_target_sha: '8ffb3c15a5475e59ae909384297fede4badcb4c7',
+          target_branch_sha: target_sha,
           state: 'closed',
           milestone: nil,
           author_id: project.creator_id,
@@ -95,10 +97,10 @@ describe Gitlab::GithubImport::PullRequestFormatter, lib: true do
           description: "*Created by: octocat*\n\nPlease pull these awesome changes",
           source_project: project,
           source_branch: 'feature',
-          head_source_sha: '2e5d3239642f9161dcbbc4b70a211a68e5e45e2b',
+          source_branch_sha: source_sha,
           target_project: project,
           target_branch: 'master',
-          base_target_sha: '8ffb3c15a5475e59ae909384297fede4badcb4c7',
+          target_branch_sha: target_sha,
           state: 'merged',
           milestone: nil,
           author_id: project.creator_id,
diff --git a/spec/lib/gitlab/import_export/project_tree_saver_spec.rb b/spec/lib/gitlab/import_export/project_tree_saver_spec.rb
index a75eaa4d51f..1424de9e60b 100644
--- a/spec/lib/gitlab/import_export/project_tree_saver_spec.rb
+++ b/spec/lib/gitlab/import_export/project_tree_saver_spec.rb
@@ -125,7 +125,7 @@ describe Gitlab::ImportExport::ProjectTreeSaver, services: true do
 
     ci_pipeline = create(:ci_pipeline,
                        project: project,
-                       sha: merge_request.last_commit.id,
+                       sha: merge_request.diff_head_sha,
                        ref: merge_request.source_branch,
                        statuses: [commit_status])
 
diff --git a/spec/lib/gitlab/note_data_builder_spec.rb b/spec/lib/gitlab/note_data_builder_spec.rb
index e848d88182f..3d6bcdfd873 100644
--- a/spec/lib/gitlab/note_data_builder_spec.rb
+++ b/spec/lib/gitlab/note_data_builder_spec.rb
@@ -27,7 +27,7 @@ describe 'Gitlab::NoteDataBuilder', lib: true do
   end
 
   describe 'When asking for a note on commit diff' do
-    let(:note) { create(:note_on_commit_diff, project: project) }
+    let(:note) { create(:diff_note_on_commit, project: project) }
 
     it 'returns the note and commit-specific data' do
       expect(data).to have_key(:commit)
@@ -90,7 +90,7 @@ describe 'Gitlab::NoteDataBuilder', lib: true do
     end
 
     let(:note) do
-      create(:note_on_merge_request_diff, noteable: merge_request,
+      create(:diff_note_on_merge_request, noteable: merge_request,
                                           project: project)
     end
 
diff --git a/spec/lib/gitlab/url_builder_spec.rb b/spec/lib/gitlab/url_builder_spec.rb
index bf11472407a..a826b24419a 100644
--- a/spec/lib/gitlab/url_builder_spec.rb
+++ b/spec/lib/gitlab/url_builder_spec.rb
@@ -43,9 +43,9 @@ describe Gitlab::UrlBuilder, lib: true do
         end
       end
 
-      context 'on a CommitDiff' do
+      context 'on a Commit Diff' do
         it 'returns a proper URL' do
-          note = build_stubbed(:note_on_commit_diff)
+          note = build_stubbed(:diff_note_on_commit)
 
           url = described_class.build(note)
 
@@ -75,10 +75,10 @@ describe Gitlab::UrlBuilder, lib: true do
         end
       end
 
-      context 'on a MergeRequestDiff' do
+      context 'on a MergeRequest Diff' do
         it 'returns a proper URL' do
           merge_request = create(:merge_request, iid: 42)
-          note = build_stubbed(:note_on_merge_request_diff, noteable: merge_request)
+          note = build_stubbed(:diff_note_on_merge_request, noteable: merge_request)
 
           url = described_class.build(note)
 
diff --git a/spec/mailers/notify_spec.rb b/spec/mailers/notify_spec.rb
index aa382f930d7..0a9b10bebea 100644
--- a/spec/mailers/notify_spec.rb
+++ b/spec/mailers/notify_spec.rb
@@ -948,7 +948,7 @@ describe Notify do
     let(:commits) { Commit.decorate(compare.commits, nil) }
     let(:diff_path) { namespace_project_compare_path(project.namespace, project, from: Commit.new(compare.base, project), to: Commit.new(compare.head, project)) }
     let(:send_from_committer_email) { false }
-    let(:diff_refs) { [project.merge_base_commit(sample_image_commit.id, sample_commit.id), project.commit(sample_commit.id)] }
+    let(:diff_refs) { Gitlab::Diff::DiffRefs.new(base_sha: project.merge_base_commit(sample_image_commit.id, sample_commit.id).id, head_sha: sample_commit.id) }
 
     subject { Notify.repository_push_email(project.id, author_id: user.id, ref: 'refs/heads/master', action: :push, compare: compare, reverse_compare: false, diff_refs: diff_refs, send_from_committer_email: send_from_committer_email) }
 
@@ -1049,7 +1049,7 @@ describe Notify do
     let(:compare) { Gitlab::Git::Compare.new(project.repository.raw_repository, sample_commit.parent_id, sample_commit.id) }
     let(:commits) { Commit.decorate(compare.commits, nil) }
     let(:diff_path) { namespace_project_commit_path(project.namespace, project, commits.first) }
-    let(:diff_refs) { [project.merge_base_commit(sample_commit.parent_id, sample_commit.id), project.commit(sample_commit.id)] }
+    let(:diff_refs) { Gitlab::Diff::DiffRefs.new(base_sha: project.merge_base_commit(sample_image_commit.id, sample_commit.id).id, head_sha: sample_commit.id) }
 
     subject { Notify.repository_push_email(project.id, author_id: user.id, ref: 'refs/heads/master', action: :push, compare: compare, diff_refs: diff_refs) }
 
diff --git a/spec/models/diff_note_spec.rb b/spec/models/diff_note_spec.rb
new file mode 100644
index 00000000000..af8e890ca95
--- /dev/null
+++ b/spec/models/diff_note_spec.rb
@@ -0,0 +1,191 @@
+require 'spec_helper'
+
+describe DiffNote, models: true do
+  include RepoHelpers
+
+  let(:project) { create(:project) }
+  let(:merge_request) { create(:merge_request, source_project: project) }
+  let(:commit) { project.commit(sample_commit.id) }
+
+  let(:path) { "files/ruby/popen.rb" }
+
+  let!(:position) do
+    Gitlab::Diff::Position.new(
+      old_path: path,
+      new_path: path,
+      old_line: nil,
+      new_line: 14,
+      diff_refs: merge_request.diff_refs
+    )
+  end
+
+  let!(:new_position) do
+    Gitlab::Diff::Position.new(
+      old_path: path,
+      new_path: path,
+      old_line: 16,
+      new_line: 22,
+      diff_refs: merge_request.diff_refs
+    )
+  end
+
+  subject { create(:diff_note_on_merge_request, project: project, position: position, noteable: merge_request) }
+
+  describe "#position=" do
+    context "when provided a string" do
+      it "sets the position" do
+        subject.position = new_position.to_json
+
+        expect(subject.position).to eq(new_position)
+      end
+    end
+
+    context "when provided a hash" do
+      it "sets the position" do
+        subject.position = new_position.to_h
+
+        expect(subject.position).to eq(new_position)
+      end
+    end
+
+    context "when provided a position object" do
+      it "sets the position" do
+        subject.position = new_position
+
+        expect(subject.position).to eq(new_position)
+      end
+    end
+  end
+
+  describe "#diff_file" do
+    it "returns the correct diff file" do
+      diff_file = subject.diff_file
+
+      expect(diff_file.old_path).to eq(position.old_path)
+      expect(diff_file.new_path).to eq(position.new_path)
+      expect(diff_file.diff_refs).to eq(position.diff_refs)
+    end
+  end
+
+  describe "#diff_line" do
+    it "returns the correct diff line" do
+      diff_line = subject.diff_line
+
+      expect(diff_line.added?).to be true
+      expect(diff_line.new_line).to eq(position.new_line)
+      expect(diff_line.text).to eq("+    vars = {")
+    end
+  end
+
+  describe "#line_code" do
+    it "returns the correct line code" do
+      line_code = Gitlab::Diff::LineCode.generate(position.file_path, position.new_line, 15)
+
+      expect(subject.line_code).to eq(line_code)
+    end
+  end
+
+  describe "#for_line?" do
+    context "when provided the correct diff line" do
+      it "returns true" do
+        expect(subject.for_line?(subject.diff_line)).to be true
+      end
+    end
+
+    context "when provided a different diff line" do
+      it "returns false" do
+        some_line = subject.diff_file.diff_lines.first
+
+        expect(subject.for_line?(some_line)).to be false
+      end
+    end
+  end
+
+  describe "#active?" do
+    context "when noteable is a commit" do
+      subject { create(:diff_note_on_commit, project: project, position: position) }
+
+      it "returns true" do
+        expect(subject.active?).to be true
+      end
+    end
+
+    context "when noteable is a merge request" do
+      context "when the merge request's diff refs match that of the diff note" do
+        it "returns true" do
+          expect(subject.active?).to be true
+        end
+      end
+
+      context "when the merge request's diff refs don't match that of the diff note" do
+        before do
+          allow(subject.noteable).to receive(:diff_refs).and_return(commit.diff_refs)
+        end
+
+        it "returns false" do
+          expect(subject.active?).to be false
+        end
+      end
+    end
+  end
+
+  describe "creation" do
+    describe "updating of position" do
+      context "when noteable is a commit" do
+        let(:diff_note) { create(:diff_note_on_commit, project: project, position: position) }
+
+        it "doesn't use the DiffPositionUpdateService" do
+          expect(Notes::DiffPositionUpdateService).not_to receive(:new)
+
+          diff_note
+        end
+
+        it "doesn't update the position" do
+          diff_note
+
+          expect(diff_note.original_position).to eq(position)
+          expect(diff_note.position).to eq(position)
+        end
+      end
+
+      context "when noteable is a merge request" do
+        let(:diff_note) { create(:diff_note_on_merge_request, project: project, position: position, noteable: merge_request) }
+
+        context "when the note is active" do
+          it "doesn't use the DiffPositionUpdateService" do
+            expect(Notes::DiffPositionUpdateService).not_to receive(:new)
+
+            diff_note
+          end
+
+          it "doesn't update the position" do
+            diff_note
+
+            expect(diff_note.original_position).to eq(position)
+            expect(diff_note.position).to eq(position)
+          end
+        end
+
+        context "when the note is outdated" do
+          before do
+            allow(merge_request).to receive(:diff_refs).and_return(commit.diff_refs)
+          end
+
+          it "uses the DiffPositionUpdateService" do
+            service = instance_double("Notes::DiffPositionUpdateService")
+            expect(Notes::DiffPositionUpdateService).to receive(:new).with(
+              project,
+              nil,
+              old_diff_refs: position.diff_refs,
+              new_diff_refs: commit.diff_refs,
+              paths: [path]
+            ).and_return(service)
+            expect(service).to receive(:execute)
+
+            diff_note
+          end
+        end
+      end
+    end
+  end
+end
diff --git a/spec/models/event_spec.rb b/spec/models/event_spec.rb
index 166a1dc4ddb..b5d0d79e14e 100644
--- a/spec/models/event_spec.rb
+++ b/spec/models/event_spec.rb
@@ -46,6 +46,22 @@ describe Event, models: true do
     it { expect(@event.author).to eq(@user) }
   end
 
+  describe '#note?' do
+    subject { Event.new(project: target.project, target: target) }
+
+    context 'issue note event' do
+      let(:target) { create(:note_on_issue) }
+
+      it { is_expected.to be_note }
+    end
+
+    context 'merge request diff note event' do
+      let(:target) { create(:legacy_diff_note_on_merge_request) }
+
+      it { is_expected.to be_note }
+    end
+  end
+
   describe '#visible_to_user?' do
     let(:project) { create(:empty_project, :public) }
     let(:non_member) { create(:user) }
@@ -89,7 +105,7 @@ describe Event, models: true do
       end
     end
 
-    context 'note event' do
+    context 'issue note event' do
       context 'on non confidential issues' do
         let(:target) { note_on_issue }
 
@@ -112,6 +128,20 @@ describe Event, models: true do
         it { expect(event.visible_to_user?(admin)).to eq true }
       end
     end
+
+    context 'merge request diff note event' do
+      let(:project) { create(:project, :public) }
+      let(:merge_request) { create(:merge_request, source_project: project, author: author, assignee: assignee) }
+      let(:note_on_merge_request) { create(:legacy_diff_note_on_merge_request, noteable: merge_request, project: project) }
+      let(:target) { note_on_merge_request }
+
+      it { expect(event.visible_to_user?(non_member)).to eq true }
+      it { expect(event.visible_to_user?(author)).to eq true }
+      it { expect(event.visible_to_user?(assignee)).to eq true }
+      it { expect(event.visible_to_user?(member)).to eq true }
+      it { expect(event.visible_to_user?(guest)).to eq true }
+      it { expect(event.visible_to_user?(admin)).to eq true }
+    end
   end
 
   describe '.limit_recent' do
diff --git a/spec/models/label_spec.rb b/spec/models/label_spec.rb
index dad2628651b..f37f44a608e 100644
--- a/spec/models/label_spec.rb
+++ b/spec/models/label_spec.rb
@@ -32,21 +32,20 @@ describe Label, models: true do
 
     it 'should validate title' do
       expect(label).not_to allow_value('G,ITLAB').for(:title)
-      expect(label).not_to allow_value('G?ITLAB').for(:title)
-      expect(label).not_to allow_value('G&ITLAB').for(:title)
       expect(label).not_to allow_value('').for(:title)
 
       expect(label).to allow_value('GITLAB').for(:title)
       expect(label).to allow_value('gitlab').for(:title)
+      expect(label).to allow_value('G?ITLAB').for(:title)
+      expect(label).to allow_value('G&ITLAB').for(:title)
       expect(label).to allow_value("customer's request").for(:title)
     end
   end
 
-  describe "#title" do
-    let(:label) { create(:label, title: "<b>test</b>") }
-
-    it "sanitizes title" do
-      expect(label.title).to eq("test")
+  describe '#title' do
+    it 'sanitizes title' do
+      label = described_class.new(title: '<b>foo & bar?</b>')
+      expect(label.title).to eq('foo & bar?')
     end
   end
 
diff --git a/spec/models/legacy_diff_note_spec.rb b/spec/models/legacy_diff_note_spec.rb
index b2d06853886..d64d89edbd3 100644
--- a/spec/models/legacy_diff_note_spec.rb
+++ b/spec/models/legacy_diff_note_spec.rb
@@ -2,7 +2,7 @@ require 'spec_helper'
 
 describe LegacyDiffNote, models: true do
   describe "Commit diff line notes" do
-    let!(:note) { create(:note_on_commit_diff, note: "+1 from me") }
+    let!(:note) { create(:legacy_diff_note_on_commit, note: "+1 from me") }
     let!(:commit) { note.noteable }
 
     it "should save a valid note" do
@@ -17,7 +17,7 @@ describe LegacyDiffNote, models: true do
 
   describe '#active?' do
     it 'is always true when the note has no associated diff' do
-      note = build(:note_on_merge_request_diff)
+      note = build(:legacy_diff_note_on_merge_request)
 
       expect(note).to receive(:diff).and_return(nil)
 
@@ -25,7 +25,7 @@ describe LegacyDiffNote, models: true do
     end
 
     it 'is never true when the note has no noteable associated' do
-      note = build(:note_on_merge_request_diff)
+      note = build(:legacy_diff_note_on_merge_request)
 
       expect(note).to receive(:diff).and_return(double)
       expect(note).to receive(:noteable).and_return(nil)
@@ -34,7 +34,7 @@ describe LegacyDiffNote, models: true do
     end
 
     it 'returns the memoized value if defined' do
-      note = build(:note_on_merge_request_diff)
+      note = build(:legacy_diff_note_on_merge_request)
 
       note.instance_variable_set(:@active, 'foo')
       expect(note).not_to receive(:find_noteable_diff)
@@ -45,7 +45,7 @@ describe LegacyDiffNote, models: true do
     context 'for a merge request noteable' do
       it 'is false when noteable has no matching diff' do
         merge = build_stubbed(:merge_request, :simple)
-        note = build(:note_on_merge_request_diff, noteable: merge)
+        note = build(:legacy_diff_note_on_merge_request, noteable: merge)
 
         allow(note).to receive(:diff).and_return(double)
         expect(note).to receive(:find_noteable_diff).and_return(nil)
@@ -63,9 +63,9 @@ describe LegacyDiffNote, models: true do
         code = Gitlab::Diff::LineCode.generate(diff.new_path, line.new_pos, line.old_pos)
 
         # We're persisting in order to trigger the set_diff callback
-        note = create(:note_on_merge_request_diff, noteable: merge,
-                                                   line_code: code,
-                                                   project: merge.source_project)
+        note = create(:legacy_diff_note_on_merge_request,  noteable: merge,
+                                                           line_code: code,
+                                                           project: merge.source_project)
 
         # Make sure we don't get a false positive from a guard clause
         expect(note).to receive(:find_noteable_diff).and_call_original
diff --git a/spec/models/merge_request_spec.rb b/spec/models/merge_request_spec.rb
index ceb4d64698f..a4b6ff8f8ad 100644
--- a/spec/models/merge_request_spec.rb
+++ b/spec/models/merge_request_spec.rb
@@ -1,6 +1,8 @@
 require 'spec_helper'
 
 describe MergeRequest, models: true do
+  include RepoHelpers
+
   subject { create(:merge_request) }
 
   describe 'associations' do
@@ -62,7 +64,7 @@ describe MergeRequest, models: true do
     end
   end
 
-  describe '#target_sha' do
+  describe '#target_branch_sha' do
     context 'when the target branch does not exist anymore' do
       let(:project) { create(:project) }
 
@@ -73,32 +75,32 @@ describe MergeRequest, models: true do
       end
 
       it 'returns nil' do
-        expect(subject.target_sha).to be_nil
+        expect(subject.target_branch_sha).to be_nil
       end
     end
   end
 
-  describe '#source_sha' do
+  describe '#source_branch_sha' do
     let(:last_branch_commit) { subject.source_project.repository.commit(subject.source_branch) }
 
     context 'with diffs' do
       subject { create(:merge_request, :with_diffs) }
       it 'returns the sha of the source branch last commit' do
-        expect(subject.source_sha).to eq(last_branch_commit.sha)
+        expect(subject.source_branch_sha).to eq(last_branch_commit.sha)
       end
     end
 
     context 'without diffs' do
       subject { create(:merge_request, :without_diffs) }
       it 'returns the sha of the source branch last commit' do
-        expect(subject.source_sha).to eq(last_branch_commit.sha)
+        expect(subject.source_branch_sha).to eq(last_branch_commit.sha)
       end
     end
 
     context 'when the merge request is being created' do
       subject { build(:merge_request, source_branch: nil, compare_commits: []) }
       it 'returns nil' do
-        expect(subject.source_sha).to be_nil
+        expect(subject.source_branch_sha).to be_nil
       end
     end
   end
@@ -252,12 +254,14 @@ describe MergeRequest, models: true do
     end
 
     it "can be removed if the last commit is the head of the source branch" do
-      allow(subject.source_project).to receive(:commit).and_return(subject.last_commit)
+      allow(subject.source_project).to receive(:commit).and_return(subject.diff_head_commit)
 
       expect(subject.can_remove_source_branch?(user)).to be_truthy
     end
 
     it "cannot be removed if the last commit is not also the head of the source branch" do
+      subject.source_branch = "lfs"
+
       expect(subject.can_remove_source_branch?(user)).to be_falsey
     end
   end
@@ -363,7 +367,7 @@ describe MergeRequest, models: true do
           and_return(2)
 
         subject.diverged_commits_count
-        allow(subject).to receive(:source_sha).and_return('123abc')
+        allow(subject).to receive(:source_branch_sha).and_return('123abc')
         subject.diverged_commits_count
       end
 
@@ -373,7 +377,7 @@ describe MergeRequest, models: true do
           and_return(2)
 
         subject.diverged_commits_count
-        allow(subject).to receive(:target_sha).and_return('123abc')
+        allow(subject).to receive(:target_branch_sha).and_return('123abc')
         subject.diverged_commits_count
       end
     end
@@ -392,11 +396,10 @@ describe MergeRequest, models: true do
 
   describe '#pipeline' do
     describe 'when the source project exists' do
-      it 'returns the latest commit' do
-        commit   = double(:commit, id: '123abc')
+      it 'returns the latest pipeline' do
         pipeline = double(:ci_pipeline, ref: 'master')
 
-        allow(subject).to receive(:last_commit).and_return(commit)
+        allow(subject).to receive(:diff_head_sha).and_return('123abc')
 
         expect(subject.source_project).to receive(:pipeline).
           with('123abc', 'master').
@@ -464,7 +467,7 @@ describe MergeRequest, models: true do
     context 'when it is not broken and has no conflicts' do
       it 'is marked as mergeable' do
         allow(subject).to receive(:broken?) { false }
-        allow(project.repository).to receive(:can_be_merged?) { true }
+        allow(project.repository).to receive(:can_be_merged?).and_return(true)
 
         expect { subject.check_if_can_be_merged }.to change { subject.merge_status }.to('can_be_merged')
       end
@@ -481,7 +484,7 @@ describe MergeRequest, models: true do
     context 'when it has conflicts' do
       before do
         allow(subject).to receive(:broken?) { false }
-        allow(project.repository).to receive(:can_be_merged?) { false }
+        allow(project.repository).to receive(:can_be_merged?).and_return(false)
       end
 
       it 'becomes unmergeable' do
@@ -608,4 +611,42 @@ describe MergeRequest, models: true do
       end
     end
   end
+
+  describe "#reload_diff" do
+    let(:note) { create(:diff_note_on_merge_request, project: subject.project, noteable: subject) }
+
+    let(:commit) { subject.project.commit(sample_commit.id) }
+
+    it "reloads the diff content" do
+      expect(subject.merge_request_diff).to receive(:reload_content)
+
+      subject.reload_diff
+    end
+
+    it "updates diff note positions" do
+      old_diff_refs = subject.diff_refs
+
+      merge_request_diff = subject.merge_request_diff
+
+      # Update merge_request_diff so that #diff_refs will return commit.diff_refs
+      allow(merge_request_diff).to receive(:reload_content) do
+        merge_request_diff.base_commit_sha = commit.parent_id
+        merge_request_diff.start_commit_sha = commit.parent_id
+        merge_request_diff.head_commit_sha = commit.sha
+      end
+
+      expect(Notes::DiffPositionUpdateService).to receive(:new).with(
+        subject.project,
+        nil,
+        old_diff_refs: old_diff_refs,
+        new_diff_refs: commit.diff_refs,
+        paths: note.position.paths
+      ).and_call_original
+      expect_any_instance_of(Notes::DiffPositionUpdateService).to receive(:execute).with(note)
+
+      expect_any_instance_of(DiffNote).to receive(:save).once
+
+      subject.reload_diff
+    end
+  end
 end
diff --git a/spec/models/notification_setting_spec.rb b/spec/models/notification_setting_spec.rb
index df336a6effe..d58673413c8 100644
--- a/spec/models/notification_setting_spec.rb
+++ b/spec/models/notification_setting_spec.rb
@@ -38,4 +38,21 @@ RSpec.describe NotificationSetting, type: :model do
       end
     end
   end
+
+  describe '#for_projects' do
+    let(:user) { create(:user) }
+
+    before do
+      1.upto(4) do |i|
+        setting = create(:notification_setting, user: user)
+
+        setting.project.update_attributes(pending_delete: true) if i.even?
+      end
+    end
+
+    it 'excludes projects pending delete' do
+      expect(user.notification_settings.for_projects).to all(have_attributes(project: an_instance_of(Project)))
+      expect(user.notification_settings.for_projects.map(&:project)).to all(have_attributes(pending_delete: false))
+    end
+  end
 end
diff --git a/spec/models/project_spec.rb b/spec/models/project_spec.rb
index a8c777d1e3e..1b434a726dc 100644
--- a/spec/models/project_spec.rb
+++ b/spec/models/project_spec.rb
@@ -129,6 +129,18 @@ describe Project, models: true do
         expect(project2.errors[:repository_storage].first).to match(/is not included in the list/)
       end
     end
+
+    it 'should not allow an invalid URI as import_url' do
+      project2 = build(:project, import_url: 'invalid://')
+
+      expect(project2).not_to be_valid
+    end
+
+    it 'should allow a valid URI as import_url' do
+      project2 = build(:project, import_url: 'ssh://test@gitlab.com/project.git')
+
+      expect(project2).to be_valid
+    end
   end
 
   describe 'default_scope' do
@@ -300,7 +312,7 @@ describe Project, models: true do
     it 'should update merge request commits with new one if pushed to source branch' do
       project.update_merge_requests(prev_commit_id, commit_id, "refs/heads/#{merge_request.source_branch}", key.user)
       merge_request.reload
-      expect(merge_request.last_commit.id).to eq(commit_id)
+      expect(merge_request.diff_head_sha).to eq(commit_id)
     end
   end
 
diff --git a/spec/models/repository_spec.rb b/spec/models/repository_spec.rb
index 7975fc64e59..24e49c8def3 100644
--- a/spec/models/repository_spec.rb
+++ b/spec/models/repository_spec.rb
@@ -12,8 +12,8 @@ describe Repository, models: true do
   end
   let(:merge_commit) do
     source_sha = repository.find_branch('feature').target
-    merge_commit_id = repository.merge(user, source_sha, 'master', commit_options)
-    repository.commit(merge_commit_id)
+    merge_commit_sha = repository.merge(user, source_sha, 'master', commit_options)
+    repository.commit(merge_commit_sha)
   end
 
   describe :branch_names_contains do
diff --git a/spec/requests/api/issues_spec.rb b/spec/requests/api/issues_spec.rb
index 2cf130df328..6adccb4ebae 100644
--- a/spec/requests/api/issues_spec.rb
+++ b/spec/requests/api/issues_spec.rb
@@ -482,12 +482,16 @@ describe API::API, api: true  do
       expect(response).to have_http_status(400)
     end
 
-    it 'should return 400 on invalid label names' do
+    it 'should allow special label names' do
       post api("/projects/#{project.id}/issues", user),
            title: 'new issue',
-           labels: 'label, ?'
-      expect(response).to have_http_status(400)
-      expect(json_response['message']['labels']['?']['title']).to eq(['is invalid'])
+           labels: 'label, label?, label&foo, ?, &'
+      expect(response.status).to eq(201)
+      expect(json_response['labels']).to include 'label'
+      expect(json_response['labels']).to include 'label?'
+      expect(json_response['labels']).to include 'label&foo'
+      expect(json_response['labels']).to include '?'
+      expect(json_response['labels']).to include '&'
     end
 
     it 'should return 400 if title is too long' do
@@ -557,12 +561,17 @@ describe API::API, api: true  do
       expect(response).to have_http_status(404)
     end
 
-    it 'should return 400 on invalid label names' do
+    it 'should allow special label names' do
       put api("/projects/#{project.id}/issues/#{issue.id}", user),
           title: 'updated title',
-          labels: 'label, ?'
-      expect(response).to have_http_status(400)
-      expect(json_response['message']['labels']['?']['title']).to eq(['is invalid'])
+          labels: 'label, label?, label&foo, ?, &'
+
+      expect(response.status).to eq(200)
+      expect(json_response['labels']).to include 'label'
+      expect(json_response['labels']).to include 'label?'
+      expect(json_response['labels']).to include 'label&foo'
+      expect(json_response['labels']).to include '?'
+      expect(json_response['labels']).to include '&'
     end
 
     context 'confidential issues' do
@@ -627,21 +636,18 @@ describe API::API, api: true  do
       expect(json_response['labels']).to include 'bar'
     end
 
-    it 'should return 400 on invalid label names' do
-      put api("/projects/#{project.id}/issues/#{issue.id}", user),
-          labels: 'label, ?'
-      expect(response).to have_http_status(400)
-      expect(json_response['message']['labels']['?']['title']).to eq(['is invalid'])
-    end
-
     it 'should allow special label names' do
       put api("/projects/#{project.id}/issues/#{issue.id}", user),
-          labels: 'label:foo, label-bar,label_bar,label/bar'
-      expect(response).to have_http_status(200)
+          labels: 'label:foo, label-bar,label_bar,label/bar,label?bar,label&bar,?,&'
+      expect(response.status).to eq(200)
       expect(json_response['labels']).to include 'label:foo'
       expect(json_response['labels']).to include 'label-bar'
       expect(json_response['labels']).to include 'label_bar'
       expect(json_response['labels']).to include 'label/bar'
+      expect(json_response['labels']).to include 'label?bar'
+      expect(json_response['labels']).to include 'label&bar'
+      expect(json_response['labels']).to include '?'
+      expect(json_response['labels']).to include '&'
     end
 
     it 'should return 400 if title is too long' do
diff --git a/spec/requests/api/labels_spec.rb b/spec/requests/api/labels_spec.rb
index 0404cf31ff7..63636b4a1b6 100644
--- a/spec/requests/api/labels_spec.rb
+++ b/spec/requests/api/labels_spec.rb
@@ -35,10 +35,10 @@ describe API::API, api: true  do
 
     it 'should return created label when only required params' do
       post api("/projects/#{project.id}/labels", user),
-           name: 'Foo',
+           name: 'Foo & Bar',
            color: '#FFAABB'
-      expect(response).to have_http_status(201)
-      expect(json_response['name']).to eq('Foo')
+      expect(response.status).to eq(201)
+      expect(json_response['name']).to eq('Foo & Bar')
       expect(json_response['color']).to eq('#FFAABB')
       expect(json_response['description']).to be_nil
     end
@@ -71,7 +71,7 @@ describe API::API, api: true  do
 
     it 'should return 400 for invalid name' do
       post api("/projects/#{project.id}/labels", user),
-           name: '?',
+           name: ',',
            color: '#FFAABB'
       expect(response).to have_http_status(400)
       expect(json_response['message']['title']).to eq(['is invalid'])
@@ -167,7 +167,7 @@ describe API::API, api: true  do
     it 'should return 400 for invalid name' do
       put api("/projects/#{project.id}/labels", user),
           name: 'label1',
-          new_name: '?',
+          new_name: ',',
           color: '#FFFFFF'
       expect(response).to have_http_status(400)
       expect(json_response['message']['title']).to eq(['is invalid'])
diff --git a/spec/requests/api/merge_requests_spec.rb b/spec/requests/api/merge_requests_spec.rb
index 61e897edf87..4a1b5600bdf 100644
--- a/spec/requests/api/merge_requests_spec.rb
+++ b/spec/requests/api/merge_requests_spec.rb
@@ -243,17 +243,19 @@ describe API::API, api: true  do
         expect(response).to have_http_status(400)
       end
 
-      it 'should return 400 on invalid label names' do
+      it 'should allow special label names' do
         post api("/projects/#{project.id}/merge_requests", user),
              title: 'Test merge_request',
              source_branch: 'markdown',
              target_branch: 'master',
              author: user,
-             labels: 'label, ?'
-        expect(response).to have_http_status(400)
-        expect(json_response['message']['labels']['?']['title']).to eq(
-          ['is invalid']
-        )
+             labels: 'label, label?, label&foo, ?, &'
+        expect(response.status).to eq(201)
+        expect(json_response['labels']).to include 'label'
+        expect(json_response['labels']).to include 'label?'
+        expect(json_response['labels']).to include 'label&foo'
+        expect(json_response['labels']).to include '?'
+        expect(json_response['labels']).to include '&'
       end
 
       context 'with existing MR' do
@@ -437,14 +439,14 @@ describe API::API, api: true  do
     end
 
     it "returns 409 if the SHA parameter doesn't match" do
-      put api("/projects/#{project.id}/merge_requests/#{merge_request.id}/merge", user), sha: merge_request.source_sha.succ
+      put api("/projects/#{project.id}/merge_requests/#{merge_request.id}/merge", user), sha: merge_request.diff_head_sha.reverse
 
       expect(response).to have_http_status(409)
       expect(json_response['message']).to start_with('SHA does not match HEAD of source branch')
     end
 
     it "succeeds if the SHA parameter matches" do
-      put api("/projects/#{project.id}/merge_requests/#{merge_request.id}/merge", user), sha: merge_request.source_sha
+      put api("/projects/#{project.id}/merge_requests/#{merge_request.id}/merge", user), sha: merge_request.diff_head_sha
 
       expect(response).to have_http_status(200)
     end
@@ -492,13 +494,17 @@ describe API::API, api: true  do
       expect(json_response['target_branch']).to eq('wiki')
     end
 
-    it 'should return 400 on invalid label names' do
+    it 'should allow special label names' do
       put api("/projects/#{project.id}/merge_requests/#{merge_request.id}",
               user),
           title: 'new issue',
-          labels: 'label, ?'
-      expect(response).to have_http_status(400)
-      expect(json_response['message']['labels']['?']['title']).to eq(['is invalid'])
+          labels: 'label, label?, label&foo, ?, &'
+      expect(response.status).to eq(200)
+      expect(json_response['labels']).to include 'label'
+      expect(json_response['labels']).to include 'label?'
+      expect(json_response['labels']).to include 'label&foo'
+      expect(json_response['labels']).to include '?'
+      expect(json_response['labels']).to include '&'
     end
   end
 
diff --git a/spec/services/notes/diff_position_update_service_spec.rb b/spec/services/notes/diff_position_update_service_spec.rb
new file mode 100644
index 00000000000..110efb54fa0
--- /dev/null
+++ b/spec/services/notes/diff_position_update_service_spec.rb
@@ -0,0 +1,175 @@
+require 'spec_helper'
+
+describe Notes::DiffPositionUpdateService, services: true do
+  let(:project) { create(:project) }
+  let(:create_commit) { project.commit("913c66a37b4a45b9769037c55c2d238bd0942d2e") }
+  let(:modify_commit) { project.commit("874797c3a73b60d2187ed6e2fcabd289ff75171e") }
+  let(:edit_commit) { project.commit("570e7b2abdd848b95f2f578043fc23bd6f6fd24d") }
+
+  let(:path) { "files/ruby/popen.rb" }
+
+  let(:old_diff_refs) do
+    Gitlab::Diff::DiffRefs.new(
+      base_sha: create_commit.parent_id,
+      head_sha: modify_commit.sha
+    )
+  end
+
+  let(:new_diff_refs) do
+    Gitlab::Diff::DiffRefs.new(
+      base_sha: create_commit.parent_id,
+      head_sha: edit_commit.sha
+    )
+  end
+
+  subject do
+    described_class.new(
+      project,
+      nil,
+      old_diff_refs: old_diff_refs,
+      new_diff_refs: new_diff_refs,
+      paths: [path]
+    )
+  end
+
+  # old diff:
+  #     1 + require 'fileutils'
+  #     2 + require 'open3'
+  #     3 +
+  #     4 + module Popen
+  #     5 +   extend self
+  #     6 +
+  #     7 +   def popen(cmd, path=nil)
+  #     8 +     unless cmd.is_a?(Array)
+  #     9 +       raise "System commands must be given as an array of strings"
+  #    10 +     end
+  #    11 +
+  #    12 +     path ||= Dir.pwd
+  #    13 +     vars = { "PWD" => path }
+  #    14 +     options = { chdir: path }
+  #    15 +
+  #    16 +     unless File.directory?(path)
+  #    17 +       FileUtils.mkdir_p(path)
+  #    18 +     end
+  #    19 +
+  #    20 +     @cmd_output = ""
+  #    21 +     @cmd_status = 0
+  #    22 +     Open3.popen3(vars, *cmd, options) do |stdin, stdout, stderr, wait_thr|
+  #    23 +       @cmd_output << stdout.read
+  #    24 +       @cmd_output << stderr.read
+  #    25 +       @cmd_status = wait_thr.value.exitstatus
+  #    26 +     end
+  #    27 +
+  #    28 +     return @cmd_output, @cmd_status
+  #    29 +   end
+  #    30 + end
+  #
+  # new diff:
+  #     1 + require 'fileutils'
+  #     2 + require 'open3'
+  #     3 +
+  #     4 + module Popen
+  #     5 +   extend self
+  #     6 +
+  #     7 +   def popen(cmd, path=nil)
+  #     8 +     unless cmd.is_a?(Array)
+  #     9 +       raise RuntimeError, "System commands must be given as an array of strings"
+  #    10 +     end
+  #    11 +
+  #    12 +     path ||= Dir.pwd
+  #    13 +
+  #    14 +     vars = {
+  #    15 +       "PWD" => path
+  #    16 +     }
+  #    17 +
+  #    18 +     options = {
+  #    19 +       chdir: path
+  #    20 +     }
+  #    21 +
+  #    22 +     unless File.directory?(path)
+  #    23 +       FileUtils.mkdir_p(path)
+  #    24 +     end
+  #    25 +
+  #    26 +     @cmd_output = ""
+  #    27 +     @cmd_status = 0
+  #    28 +
+  #    29 +     Open3.popen3(vars, *cmd, options) do |stdin, stdout, stderr, wait_thr|
+  #    30 +       @cmd_output << stdout.read
+  #    31 +       @cmd_output << stderr.read
+  #    32 +       @cmd_status = wait_thr.value.exitstatus
+  #    33 +     end
+  #    34 +
+  #    35 +     return @cmd_output, @cmd_status
+  #    36 +   end
+  #    37 + end
+  #
+  # old->new diff:
+  # .. .. @@ -6,12 +6,18 @@ module Popen
+  #  6  6
+  #  7  7    def popen(cmd, path=nil)
+  #  8  8      unless cmd.is_a?(Array)
+  #  9    -      raise "System commands must be given as an array of strings"
+  #     9 +      raise RuntimeError, "System commands must be given as an array of strings"
+  # 10 10      end
+  # 11 11
+  # 12 12      path ||= Dir.pwd
+  # 13    -    vars = { "PWD" => path }
+  # 14    -    options = { chdir: path }
+  #    13 +
+  #    14 +    vars = {
+  #    15 +      "PWD" => path
+  #    16 +    }
+  #    17 +
+  #    18 +    options = {
+  #    19 +      chdir: path
+  #    20 +    }
+  # 15 21
+  # 16 22      unless File.directory?(path)
+  # 17 23        FileUtils.mkdir_p(path)
+  # 18 24      end
+  # 19 25
+  # 20 26      @cmd_output = ""
+  # 21 27      @cmd_status = 0
+  #    28 +
+  # 22 29      Open3.popen3(vars, *cmd, options) do |stdin, stdout, stderr, wait_thr|
+  # 23 30        @cmd_output << stdout.read
+  # 24 31        @cmd_output << stderr.read
+  # .. ..
+
+  describe "#execute" do
+    let(:note) { create(:diff_note_on_merge_request, project: project, position: old_position) }
+
+    let(:old_position) do
+      Gitlab::Diff::Position.new(
+        old_path: path,
+        new_path: path,
+        old_line: nil,
+        new_line: line,
+        diff_refs: old_diff_refs
+      )
+    end
+
+    context "when the diff line is the same" do
+      let(:line) { 16 }
+
+      it "updates the position" do
+        subject.execute(note)
+
+        expect(note.original_position).to eq(old_position)
+        expect(note.position).not_to eq(old_position)
+        expect(note.position.new_line).to eq(22)
+      end
+    end
+
+    context "when the diff line has changed" do
+      let(:line) { 9 }
+
+      it "doesn't update the position" do
+        subject.execute(note)
+
+        expect(note.original_position).to eq(old_position)
+        expect(note.position).to eq(old_position)
+      end
+    end
+  end
+end
diff --git a/spec/services/system_note_service_spec.rb b/spec/services/system_note_service_spec.rb
index 85dd30bf48c..43693441450 100644
--- a/spec/services/system_note_service_spec.rb
+++ b/spec/services/system_note_service_spec.rb
@@ -213,7 +213,7 @@ describe SystemNoteService, services: true do
       create(:merge_request, source_project: project, target_project: project)
     end
 
-    subject { described_class.merge_when_build_succeeds(noteable, project, author, noteable.last_commit) }
+    subject { described_class.merge_when_build_succeeds(noteable, project, author, noteable.diff_head_commit) }
 
     it_behaves_like 'a system note'
 
diff --git a/vendor/gitignore/Android.gitignore b/vendor/gitignore/Android.gitignore
index f6b286cea98..e5df7b9150e 100644
--- a/vendor/gitignore/Android.gitignore
+++ b/vendor/gitignore/Android.gitignore
@@ -35,6 +35,7 @@ captures/
 # Intellij
 *.iml
 .idea/workspace.xml
+.idea/libraries
 
 # Keystore files
 *.jks
diff --git a/vendor/gitignore/C++.gitignore b/vendor/gitignore/C++.gitignore
index 4581ef2eeef..259148fa18f 100644
--- a/vendor/gitignore/C++.gitignore
+++ b/vendor/gitignore/C++.gitignore
@@ -1,3 +1,6 @@
+# Prerequisites
+*.d
+
 # Compiled Object files
 *.slo
 *.lo
diff --git a/vendor/gitignore/C.gitignore b/vendor/gitignore/C.gitignore
index f805e810e5c..7a065c709c7 100644
--- a/vendor/gitignore/C.gitignore
+++ b/vendor/gitignore/C.gitignore
@@ -1,3 +1,6 @@
+# Prerequisites
+*.d
+
 # Object files
 *.o
 *.ko
diff --git a/vendor/gitignore/Gradle.gitignore b/vendor/gitignore/Gradle.gitignore
index 77617a15c38..a1fc39c070f 100644
--- a/vendor/gitignore/Gradle.gitignore
+++ b/vendor/gitignore/Gradle.gitignore
@@ -1,5 +1,5 @@
 .gradle
-build/
+/build/
 
 # Ignore Gradle GUI config
 gradle-app.setting
diff --git a/vendor/gitignore/LICENSE b/vendor/gitignore/LICENSE
index b8a103ac9b1..0e259d42c99 100644
--- a/vendor/gitignore/LICENSE
+++ b/vendor/gitignore/LICENSE
@@ -1,19 +1,121 @@
-Copyright (c) 2016 GitHub, Inc.
-
-Permission is hereby granted,  free of charge,  to any person obtaining a
-copy of this software and associated documentation files (the "Software"),
-to deal in the Software without restriction, including without limitation
-the rights to  use, copy, modify, merge, publish, distribute, sublicense,
-and/or sell copies of the Software, and to permit persons to whom the
-Software is furnished to do so, subject to the following conditions:
-
-The above copyright notice and this permission notice shall be included in
-all copies or substantial portions of the Software.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
-FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
-DEALINGS IN THE SOFTWARE.
+Creative Commons Legal Code
+
+CC0 1.0 Universal
+
+    CREATIVE COMMONS CORPORATION IS NOT A LAW FIRM AND DOES NOT PROVIDE
+    LEGAL SERVICES. DISTRIBUTION OF THIS DOCUMENT DOES NOT CREATE AN
+    ATTORNEY-CLIENT RELATIONSHIP. CREATIVE COMMONS PROVIDES THIS
+    INFORMATION ON AN "AS-IS" BASIS. CREATIVE COMMONS MAKES NO WARRANTIES
+    REGARDING THE USE OF THIS DOCUMENT OR THE INFORMATION OR WORKS
+    PROVIDED HEREUNDER, AND DISCLAIMS LIABILITY FOR DAMAGES RESULTING FROM
+    THE USE OF THIS DOCUMENT OR THE INFORMATION OR WORKS PROVIDED
+    HEREUNDER.
+
+Statement of Purpose
+
+The laws of most jurisdictions throughout the world automatically confer
+exclusive Copyright and Related Rights (defined below) upon the creator
+and subsequent owner(s) (each and all, an "owner") of an original work of
+authorship and/or a database (each, a "Work").
+
+Certain owners wish to permanently relinquish those rights to a Work for
+the purpose of contributing to a commons of creative, cultural and
+scientific works ("Commons") that the public can reliably and without fear
+of later claims of infringement build upon, modify, incorporate in other
+works, reuse and redistribute as freely as possible in any form whatsoever
+and for any purposes, including without limitation commercial purposes.
+These owners may contribute to the Commons to promote the ideal of a free
+culture and the further production of creative, cultural and scientific
+works, or to gain reputation or greater distribution for their Work in
+part through the use and efforts of others.
+
+For these and/or other purposes and motivations, and without any
+expectation of additional consideration or compensation, the person
+associating CC0 with a Work (the "Affirmer"), to the extent that he or she
+is an owner of Copyright and Related Rights in the Work, voluntarily
+elects to apply CC0 to the Work and publicly distribute the Work under its
+terms, with knowledge of his or her Copyright and Related Rights in the
+Work and the meaning and intended legal effect of CC0 on those rights.
+
+1. Copyright and Related Rights. A Work made available under CC0 may be
+protected by copyright and related or neighboring rights ("Copyright and
+Related Rights"). Copyright and Related Rights include, but are not
+limited to, the following:
+
+  i. the right to reproduce, adapt, distribute, perform, display,
+     communicate, and translate a Work;
+ ii. moral rights retained by the original author(s) and/or performer(s);
+iii. publicity and privacy rights pertaining to a person's image or
+     likeness depicted in a Work;
+ iv. rights protecting against unfair competition in regards to a Work,
+     subject to the limitations in paragraph 4(a), below;
+  v. rights protecting the extraction, dissemination, use and reuse of data
+     in a Work;
+ vi. database rights (such as those arising under Directive 96/9/EC of the
+     European Parliament and of the Council of 11 March 1996 on the legal
+     protection of databases, and under any national implementation
+     thereof, including any amended or successor version of such
+     directive); and
+vii. other similar, equivalent or corresponding rights throughout the
+     world based on applicable law or treaty, and any national
+     implementations thereof.
+
+2. Waiver. To the greatest extent permitted by, but not in contravention
+of, applicable law, Affirmer hereby overtly, fully, permanently,
+irrevocably and unconditionally waives, abandons, and surrenders all of
+Affirmer's Copyright and Related Rights and associated claims and causes
+of action, whether now known or unknown (including existing as well as
+future claims and causes of action), in the Work (i) in all territories
+worldwide, (ii) for the maximum duration provided by applicable law or
+treaty (including future time extensions), (iii) in any current or future
+medium and for any number of copies, and (iv) for any purpose whatsoever,
+including without limitation commercial, advertising or promotional
+purposes (the "Waiver"). Affirmer makes the Waiver for the benefit of each
+member of the public at large and to the detriment of Affirmer's heirs and
+successors, fully intending that such Waiver shall not be subject to
+revocation, rescission, cancellation, termination, or any other legal or
+equitable action to disrupt the quiet enjoyment of the Work by the public
+as contemplated by Affirmer's express Statement of Purpose.
+
+3. Public License Fallback. Should any part of the Waiver for any reason
+be judged legally invalid or ineffective under applicable law, then the
+Waiver shall be preserved to the maximum extent permitted taking into
+account Affirmer's express Statement of Purpose. In addition, to the
+extent the Waiver is so judged Affirmer hereby grants to each affected
+person a royalty-free, non transferable, non sublicensable, non exclusive,
+irrevocable and unconditional license to exercise Affirmer's Copyright and
+Related Rights in the Work (i) in all territories worldwide, (ii) for the
+maximum duration provided by applicable law or treaty (including future
+time extensions), (iii) in any current or future medium and for any number
+of copies, and (iv) for any purpose whatsoever, including without
+limitation commercial, advertising or promotional purposes (the
+"License"). The License shall be deemed effective as of the date CC0 was
+applied by Affirmer to the Work. Should any part of the License for any
+reason be judged legally invalid or ineffective under applicable law, such
+partial invalidity or ineffectiveness shall not invalidate the remainder
+of the License, and in such case Affirmer hereby affirms that he or she
+will not (i) exercise any of his or her remaining Copyright and Related
+Rights in the Work or (ii) assert any associated claims and causes of
+action with respect to the Work, in either case contrary to Affirmer's
+express Statement of Purpose.
+
+4. Limitations and Disclaimers.
+
+ a. No trademark or patent rights held by Affirmer are waived, abandoned,
+    surrendered, licensed or otherwise affected by this document.
+ b. Affirmer offers the Work as-is and makes no representations or
+    warranties of any kind concerning the Work, express, implied,
+    statutory or otherwise, including without limitation warranties of
+    title, merchantability, fitness for a particular purpose, non
+    infringement, or the absence of latent or other defects, accuracy, or
+    the present or absence of errors, whether or not discoverable, all to
+    the greatest extent permissible under applicable law.
+ c. Affirmer disclaims responsibility for clearing rights of other persons
+    that may apply to the Work or any use thereof, including without
+    limitation any person's Copyright and Related Rights in the Work.
+    Further, Affirmer disclaims responsibility for obtaining any necessary
+    consents, permissions or other rights required for any use of the
+    Work.
+ d. Affirmer understands and acknowledges that Creative Commons is not a
+    party to this document and has no duty or obligation with respect to
+    this CC0 or use of the Work.
diff --git a/vendor/gitignore/Node.gitignore b/vendor/gitignore/Node.gitignore
index 5148e527a7e..aea5294de9d 100644
--- a/vendor/gitignore/Node.gitignore
+++ b/vendor/gitignore/Node.gitignore
@@ -7,6 +7,7 @@ npm-debug.log*
 pids
 *.pid
 *.seed
+*.pid.lock
 
 # Directory for instrumented libs generated by jscoverage/JSCover
 lib-cov
diff --git a/vendor/gitignore/TeX.gitignore b/vendor/gitignore/TeX.gitignore
index 4123a577c47..3cb097c9d5e 100644
--- a/vendor/gitignore/TeX.gitignore
+++ b/vendor/gitignore/TeX.gitignore
@@ -152,6 +152,9 @@ pythontex-files-*/
 # todonotes
 *.tdo
 
+# easy-todo
+*.lod
+
 # xindy
 *.xdy
 
diff --git a/vendor/gitlab-ci-yml/Maven.gitlab-ci.yml b/vendor/gitlab-ci-yml/Maven.gitlab-ci.yml
new file mode 100644
index 00000000000..1678a47f9ac
--- /dev/null
+++ b/vendor/gitlab-ci-yml/Maven.gitlab-ci.yml
@@ -0,0 +1,102 @@
+---
+# Build JAVA applications using Apache Maven (http://maven.apache.org)
+# For docker image tags see https://hub.docker.com/_/maven/
+#
+# For general lifecycle information see https://maven.apache.org/guides/introduction/introduction-to-the-lifecycle.html
+# 
+# This template will build and test your projects as well as create the documentation.
+# 
+# * Caches downloaded dependencies and plugins between invocation.
+# * Does only verify merge requests but deploy built artifacts of the
+#   master branch.
+# * Shows how to use multiple jobs in test stage for verifying functionality
+#   with multiple JDKs.
+# * Uses site:stage to collect the documentation for multi-module projects.
+# * Publishes the documentation for `master` branch.
+
+variables:
+  # This will supress any download for dependencies and plugins or upload messages which would clutter the console log.
+  # `showDateTime` will show the passed time in milliseconds. You need to specify `--batch-mode` to make this work.
+  MAVEN_OPTS: "-Dorg.slf4j.simpleLogger.log.org.apache.maven.cli.transfer.Slf4jMavenTransferListener=WARN -Dorg.slf4j.simpleLogger.showDateTime=true -Djava.awt.headless=true"
+  # As of Maven 3.3.0 instead of this you may define these options in `.mvn/maven.config` so the same config is used
+  # when running from the command line.
+  # `installAtEnd` and `deployAtEnd`are only effective with recent version of the corresponding plugins.
+  MAVEN_CLI_OPTS: "--batch-mode --errors --fail-at-end --show-version -DinstallAtEnd=true -DdeployAtEnd=true"
+
+# Cache downloaded dependencies and plugins between builds.
+cache:
+  paths:
+    - /root/.m2/repository/
+
+# This will only validate and compile stuff and run e.g. maven-enforcer-plugin. 
+# Because some enforcer rules might check dependency convergence and class duplications
+# we use `test-compile` here instead of `validate`, so the correct classpath is picked up.
+.validate: &validate
+  stage: build
+  script:
+    - 'mvn $MAVEN_CLI_OPTS test-compile'
+
+# For merge requests do not `deploy` but only run `verify`.
+# See https://maven.apache.org/guides/introduction/introduction-to-the-lifecycle.html
+.verify: &verify
+  stage: test
+  script:
+    - 'mvn $MAVEN_CLI_OPTS verify site site:stage'
+  except:
+    - master
+
+# Validate merge requests using JDK7
+validate:jdk7:
+  <<: *validate
+  image: maven:3.3.9-jdk-7
+
+# Validate merge requests using JDK8
+validate:jdk8:
+  <<: *validate
+  image: maven:3.3.9-jdk-8
+
+# Verify merge requests using JDK7
+verify:jdk7:
+  <<: *verify
+  image: maven:3.3.9-jdk-7
+
+# Verify merge requests using JDK8
+verify:jdk8:
+  <<: *verify
+  image: maven:3.3.9-jdk-8
+
+
+# For `master` branch run `mvn deploy` automatically.
+# Here you need to decide whether you want to use JDK7 or 8.
+# To get this working you need to define a volume while configuring your gitlab-ci-multi-runner.
+# Mount your `settings.xml` as `/root/.m2/settings.xml` which holds your secrets.
+# See https://maven.apache.org/settings.html
+deploy:jdk8:
+  # Use stage test here, so the pages job may later pickup the created site.
+  stage: test
+  script:
+    - 'mvn $MAVEN_CLI_OPTS deploy site site:stage'
+  only:
+    - master
+  # Archive up the built documentation site.
+  artifacts:
+    paths:
+    - target/staging
+  image: maven:3.3.9-jdk-8
+
+
+pages:
+  image: busybox:latest
+  stage: deploy
+  script:
+    # Because Maven appends the artifactId automatically to the staging path if you did define a parent pom,
+    # you might need to use `mv target/staging/YOUR_ARTIFACT_ID public` instead.
+    - mv target/staging public
+  dependencies:
+    - deploy:jdk8
+  artifacts:
+    paths:
+    - public
+  only:
+    - master
+
diff --git a/vendor/gitlab-ci-yml/Pages/brunch.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Brunch.gitlab-ci.yml
index 7fcc0b436b5..7fcc0b436b5 100644
--- a/vendor/gitlab-ci-yml/Pages/brunch.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Brunch.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/doxygen.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Doxygen.gitlab-ci.yml
index 791afdd23f1..791afdd23f1 100644
--- a/vendor/gitlab-ci-yml/Pages/doxygen.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Doxygen.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/html.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/HTML.gitlab-ci.yml
index 249a168aa33..249a168aa33 100644
--- a/vendor/gitlab-ci-yml/Pages/html.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/HTML.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/harp.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Harp.gitlab-ci.yml
index dd3ef149668..dd3ef149668 100644
--- a/vendor/gitlab-ci-yml/Pages/harp.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Harp.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/hexo.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Hexo.gitlab-ci.yml
index b468d79bcad..b468d79bcad 100644
--- a/vendor/gitlab-ci-yml/Pages/hexo.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Hexo.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/hugo.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Hugo.gitlab-ci.yml
index 45df6975259..45df6975259 100644
--- a/vendor/gitlab-ci-yml/Pages/hugo.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Hugo.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/hyde.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Hyde.gitlab-ci.yml
index f5b40f2b9f1..f5b40f2b9f1 100644
--- a/vendor/gitlab-ci-yml/Pages/hyde.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Hyde.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/jekyll.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Jekyll.gitlab-ci.yml
index 36918fc005a..36918fc005a 100644
--- a/vendor/gitlab-ci-yml/Pages/jekyll.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Jekyll.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/lektor.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Lektor.gitlab-ci.yml
index c5c44a5d86c..c5c44a5d86c 100644
--- a/vendor/gitlab-ci-yml/Pages/lektor.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Lektor.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/metalsmith.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Metalsmith.gitlab-ci.yml
index 50e8b7ccd46..50e8b7ccd46 100644
--- a/vendor/gitlab-ci-yml/Pages/metalsmith.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Metalsmith.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/middleman.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Middleman.gitlab-ci.yml
index 9f4cc0574d6..9f4cc0574d6 100644
--- a/vendor/gitlab-ci-yml/Pages/middleman.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Middleman.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/nanoc.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Nanoc.gitlab-ci.yml
index b469b316ba5..b469b316ba5 100644
--- a/vendor/gitlab-ci-yml/Pages/nanoc.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Nanoc.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/octopress.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Octopress.gitlab-ci.yml
index 4762ec9acfd..4762ec9acfd 100644
--- a/vendor/gitlab-ci-yml/Pages/octopress.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Octopress.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Pages/pelican.gitlab-ci.yml b/vendor/gitlab-ci-yml/Pages/Pelican.gitlab-ci.yml
index c5f3154f587..c5f3154f587 100644
--- a/vendor/gitlab-ci-yml/Pages/pelican.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Pages/Pelican.gitlab-ci.yml
diff --git a/vendor/gitlab-ci-yml/Ruby.gitlab-ci.yml b/vendor/gitlab-ci-yml/Ruby.gitlab-ci.yml
index 78f3e39949f..2a761bbd127 100644
--- a/vendor/gitlab-ci-yml/Ruby.gitlab-ci.yml
+++ b/vendor/gitlab-ci-yml/Ruby.gitlab-ci.yml
@@ -10,12 +10,19 @@ services:
   - redis:latest
   - postgres:latest
 
+# Cache gems in between builds
+cache:
+  paths:
+    - vendor/ruby
+
 # This is a basic example for a gem or script which doesn't use
 # services such as redis or postgres
 before_script:
-  - gem install bundler         # Bundler is not installed with the image
-  - bundle install -j $(nproc)  # Install dependencies
+  - ruby -v                                   # Print out ruby version for debugging
+  - gem install bundler  --no-ri --no-rdoc    # Bundler is not installed with the image
+  - bundle install -j $(nproc) --path vendor  # Install dependencies into ./vendor/ruby
 
+# Optional - Delete if not using `rubocop`
 rubocop:
   script:
   - rubocop
@@ -26,5 +33,5 @@ rspec:
 
 rails:
   script:
-  - rake db:migrate
-  - rspec spec
+  - bundle exec rake db:migrate
+  - bundle exec rake test
diff --git a/vendor/gitlab-ci-yml/Rust.gitlab-ci.yml b/vendor/gitlab-ci-yml/Rust.gitlab-ci.yml
new file mode 100644
index 00000000000..ae3f7405ea3
--- /dev/null
+++ b/vendor/gitlab-ci-yml/Rust.gitlab-ci.yml
@@ -0,0 +1,23 @@
+# Unofficial language image. Look for the different tagged releases at:
+# https://hub.docker.com/r/scorpil/rust/tags/
+image: "scorpil/rust:stable"
+
+# Optional: Pick zero or more services to be used on all builds.
+# Only needed when using a docker container to run your tests in.
+# Check out: http://docs.gitlab.com/ce/ci/docker/using_docker_images.html#what-is-service
+#services:
+#  - mysql:latest
+#  - redis:latest
+#  - postgres:latest
+
+# Optional: Install a C compiler, cmake and git into the container.
+# You will often need this when you (or any of your dependencies) depends on C code.
+#before_script:
+#- apt-get update -yqq
+#- apt-get install -yqq --no-install-recommends build-essential
+
+# Use cargo to test the project
+test:cargo:
+  script:
+  - rustc --version && cargo --version      # Print version info for debugging
+  - cargo test --verbose --jobs 1 --release # Don't paralize to make errors more readable
diff --git a/vendor/gitlab-ci-yml/Scala.gitlab-ci.yml b/vendor/gitlab-ci-yml/Scala.gitlab-ci.yml
new file mode 100644
index 00000000000..443ba42e38c
--- /dev/null
+++ b/vendor/gitlab-ci-yml/Scala.gitlab-ci.yml
@@ -0,0 +1,22 @@
+# Official Java image. Look for the different tagged releases at
+# https://hub.docker.com/r/library/java/tags/ . A Java image is not required
+# but an image with a JVM speeds up the build a bit.
+image: java:8
+
+before_script:
+  # Enable the usage of sources over https
+  - apt-get update -yqq
+  - apt-get install apt-transport-https -yqq
+  # Add keyserver for SBT
+  - echo "deb http://dl.bintray.com/sbt/debian /" | tee -a /etc/apt/sources.list.d/sbt.list
+  - apt-key adv --keyserver hkp://keyserver.ubuntu.com:80 --recv 642AC823
+  # Install SBT
+  - apt-get update -yqq
+  - apt-get install sbt -yqq
+  # Log the sbt version
+  - sbt sbt-version
+
+test:
+  script:
+    # Execute your project's tests
+    - sbt clean test