Merge remote-tracking branch 'upstream/master' into feature/1376-allow-write-access-deploy-keys

* upstream/master: (236 commits)
  Mention Git strategy none
  Remove ToC since it's now supported in the docs portal itself
  Add 8.14 to versions with further additions to review apps
  Add Limitations sections to environments and review apps docs
  Add link to environments docs
  Fix URL to review apps docs
  Add a prerequisites section, add some links
  Link to NGINX example project for the time being
  Get rid most of the irrelevant sections
  Add note about current limitation in $CI_BUILD_REF_NAME
  Add an intro and an Overview section for Review Apps
  WIP review apps
  Add Review apps link to CI README
  Add stop environment permissions and remove delete
  Add note about auto-stopping of environments
  Update CHANGELOG.md for 8.13.6
  Finish "Stopping envs" and "Grouping similar envs" sections
  Highlight first user autocomplete option
  Remove ToC and fix headings in Markdown docs
  Revert "Merge branch '22680-unlabel-limit-autocomplete-to-selected-items' into 'master'"
  ...

8 files changed, 112 insertions, 8 deletions

diff --git a/db/fixtures/test/001_repo.rb b/db/fixtures/test/001_repo.rb
deleted file mode 100644
index e69de29bb2d..00000000000
--- a/db/fixtures/test/001_repo.rb
+++ /dev/null
diff --git a/db/migrate/20160914131004_only_allow_merge_if_all_discussions_are_resolved.rb b/db/migrate/20160914131004_only_allow_merge_if_all_discussions_are_resolved.rb
index fad62d716b3..4da5ec9bd28 100644
--- a/db/migrate/20160914131004_only_allow_merge_if_all_discussions_are_resolved.rb
+++ b/db/migrate/20160914131004_only_allow_merge_if_all_discussions_are_resolved.rb
@@ -5,10 +5,7 @@ class OnlyAllowMergeIfAllDiscussionsAreResolved < ActiveRecord::Migration
   disable_ddl_transaction!
 
   def up
-    add_column_with_default(:projects,
-                            :only_allow_merge_if_all_discussions_are_resolved,
-                            :boolean,
-                            default: false)
+    add_column :projects, :only_allow_merge_if_all_discussions_are_resolved, :boolean
   end
 
   def down
diff --git a/db/migrate/20161020075734_default_request_access_groups.rb b/db/migrate/20161020075734_default_request_access_groups.rb
new file mode 100644
index 00000000000..9721cc88724
--- /dev/null
+++ b/db/migrate/20161020075734_default_request_access_groups.rb
@@ -0,0 +1,12 @@
+class DefaultRequestAccessGroups < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+  DOWNTIME = false
+
+  def up
+    change_column_default :namespaces, :request_access_enabled, false
+  end
+
+  def down
+    change_column_default :namespaces, :request_access_enabled, true
+  end
+end
diff --git a/db/migrate/20161020075830_default_request_access_projects.rb b/db/migrate/20161020075830_default_request_access_projects.rb
new file mode 100644
index 00000000000..cb790291b24
--- /dev/null
+++ b/db/migrate/20161020075830_default_request_access_projects.rb
@@ -0,0 +1,12 @@
+class DefaultRequestAccessProjects < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+  DOWNTIME = false
+  
+  def up
+    change_column_default :projects, :request_access_enabled, false
+  end
+
+  def down
+    change_column_default :projects, :request_access_enabled, true
+  end
+end
diff --git a/db/migrate/20161103191444_add_sidekiq_throttling_to_application_settings.rb b/db/migrate/20161103191444_add_sidekiq_throttling_to_application_settings.rb
new file mode 100644
index 00000000000..e644a174964
--- /dev/null
+++ b/db/migrate/20161103191444_add_sidekiq_throttling_to_application_settings.rb
@@ -0,0 +1,31 @@
+# See http://doc.gitlab.com/ce/development/migration_style_guide.html
+# for more information on how to write migrations for GitLab.
+
+class AddSidekiqThrottlingToApplicationSettings < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+
+  # Set this constant to true if this migration requires downtime.
+  DOWNTIME = false
+
+  # When a migration requires downtime you **must** uncomment the following
+  # constant and define a short and easy to understand explanation as to why the
+  # migration requires downtime.
+  # DOWNTIME_REASON = ''
+
+  # When using the methods "add_concurrent_index" or "add_column_with_default"
+  # you must disable the use of transactions as these methods can not run in an
+  # existing transaction. When using "add_concurrent_index" make sure that this
+  # method is the _only_ method called in the migration, any other changes
+  # should go in a separate migration. This ensures that upon failure _only_ the
+  # index creation fails and can be retried or reverted easily.
+  #
+  # To disable transactions uncomment the following line and remove these
+  # comments:
+  # disable_ddl_transaction!
+
+  def change
+    add_column :application_settings, :sidekiq_throttling_enabled, :boolean, default: false
+    add_column :application_settings, :sidekiq_throttling_queues, :string
+    add_column :application_settings, :sidekiq_throttling_factor, :decimal
+  end
+end
diff --git a/db/migrate/20161011222551_remove_inactive_jira_service_properties.rb b/db/post_migrate/20161011222551_remove_inactive_jira_service_properties.rb
index 319d86ac159..319d86ac159 100644
--- a/db/migrate/20161011222551_remove_inactive_jira_service_properties.rb
+++ b/db/post_migrate/20161011222551_remove_inactive_jira_service_properties.rb
diff --git a/db/post_migrate/20161109150329_fix_project_records_with_invalid_visibility.rb b/db/post_migrate/20161109150329_fix_project_records_with_invalid_visibility.rb
new file mode 100644
index 00000000000..df38591a333
--- /dev/null
+++ b/db/post_migrate/20161109150329_fix_project_records_with_invalid_visibility.rb
@@ -0,0 +1,49 @@
+class FixProjectRecordsWithInvalidVisibility < ActiveRecord::Migration
+  include Gitlab::Database::MigrationHelpers
+
+  BATCH_SIZE = 500
+  DOWNTIME = false
+
+  # This migration is idempotent and there's no sense in throwing away the
+  # partial result if it's interrupted
+  disable_ddl_transaction!
+
+  def up
+    projects = Arel::Table.new(:projects)
+    namespaces = Arel::Table.new(:namespaces)
+
+    finder_sql =
+      projects.
+      join(namespaces, Arel::Nodes::InnerJoin).
+      on(projects[:namespace_id].eq(namespaces[:id])).
+      where(projects[:visibility_level].gt(namespaces[:visibility_level])).
+      project(projects[:id], namespaces[:visibility_level]).
+      take(BATCH_SIZE).
+      to_sql
+
+    # Update matching rows in batches. Each batch can cause up to 3 UPDATE
+    # statements, in addition to the SELECT: one per visibility_level 
+    loop do
+      to_update = connection.exec_query(finder_sql)
+      break if to_update.rows.count == 0
+
+      # row[0] is projects.id, row[1] is namespaces.visibility_level
+      updates = to_update.rows.each_with_object(Hash.new {|h, k| h[k] = [] }) do |row, obj|
+        obj[row[1]] << row[0]
+      end
+
+      updates.each do |visibility_level, project_ids|
+        updater = Arel::UpdateManager.new(ActiveRecord::Base).
+          table(projects).
+          set(projects[:visibility_level] => visibility_level).
+          where(projects[:id].in(project_ids))
+
+        ActiveRecord::Base.connection.exec_update(updater.to_sql, self.class.name, [])
+      end
+    end
+  end
+
+  def down
+    # no-op
+  end
+end
diff --git a/db/schema.rb b/db/schema.rb
index 47e468ad896..79e0513bf5d 100644
--- a/db/schema.rb
+++ b/db/schema.rb
@@ -11,7 +11,7 @@
 #
 # It's strongly recommended that you check this file into your version control system.
 
-ActiveRecord::Schema.define(version: 20161106185620) do
+ActiveRecord::Schema.define(version: 20161109150329) do
 
   # These are extensions that must be enabled in order to support this database
   enable_extension "plpgsql"
@@ -98,6 +98,9 @@ ActiveRecord::Schema.define(version: 20161106185620) do
     t.text "help_page_text_html"
     t.text "shared_runners_text_html"
     t.text "after_sign_up_text_html"
+    t.boolean "sidekiq_throttling_enabled", default: false
+    t.string "sidekiq_throttling_queues"
+    t.decimal "sidekiq_throttling_factor"
     t.boolean "housekeeping_enabled", default: true, null: false
     t.boolean "housekeeping_bitmaps_enabled", default: true, null: false
     t.integer "housekeeping_incremental_repack_period", default: 10, null: false
@@ -721,7 +724,7 @@ ActiveRecord::Schema.define(version: 20161106185620) do
     t.string "avatar"
     t.boolean "share_with_group_lock", default: false
     t.integer "visibility_level", default: 20, null: false
-    t.boolean "request_access_enabled", default: true, null: false
+    t.boolean "request_access_enabled", default: false, null: false
     t.datetime "deleted_at"
     t.boolean "lfs_enabled"
     t.text "description_html"
@@ -909,11 +912,11 @@ ActiveRecord::Schema.define(version: 20161106185620) do
     t.boolean "only_allow_merge_if_build_succeeds", default: false, null: false
     t.boolean "has_external_issue_tracker"
     t.string "repository_storage", default: "default", null: false
-    t.boolean "request_access_enabled", default: true, null: false
+    t.boolean "request_access_enabled", default: false, null: false
     t.boolean "has_external_wiki"
     t.boolean "lfs_enabled"
     t.text "description_html"
-    t.boolean "only_allow_merge_if_all_discussions_are_resolved", default: false, null: false
+    t.boolean "only_allow_merge_if_all_discussions_are_resolved"
   end
 
   add_index "projects", ["ci_id"], name: "index_projects_on_ci_id", using: :btree