Added connect_timeout and fix for transactions per statement

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Docs/Makefile.am:
  Removed manual.pdf from the standard distribution
Docs/manual.texi:
  Updated table maintaince and timeouts
Makefile.am:
  Added missing targets
client/mysql.cc:
  Added -O connect_timeout
client/mysqladmin.c:
  Added -O connect_timeout
configure.in:
  3.23.29
libmysql/libmysql.c:
  Added connect_timeout
myisam/mi_check.c:
  Fixed warning i CHECK TABLE
myisam/mi_create.c:
  cleanup
sql-bench/bench-init.pl.sh:
  Updated version
sql/ha_berkeley.cc:
  Fixed bug in transaction pre statement
sql/sql_select.cc:
  removed 'explain' from slow query log
support-files/mysql.server.sh:
  Added locks

1 files changed, 1 insertions, 1 deletions

diff --git a/myisam/mi_check.c b/myisam/mi_check.c
index a38a45f9438..ec9320f6104 100644
--- a/myisam/mi_check.c
+++ b/myisam/mi_check.c
@@ -108,7 +108,7 @@ int chk_status(MI_CHECK *param, register MI_INFO *info)
   else if (mi_is_crashed(info))
     mi_check_print_warning(param,
 			   "Table is marked as crashed");
-  if (share->state.open_count)
+  if (share->state.open_count != (info->s->global_changed ? 1 : 0))
   {
     mi_check_print_warning(param,
 			   "%d clients is using or hasn't closed the table properly",