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/**
* Copyright (C) 2008 10gen Inc.
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License, version 3,
* as published by the Free Software Foundation.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*
* As a special exception, the copyright holders give permission to link the
* code of portions of this program with the OpenSSL library under certain
* conditions as described in each individual source file and distribute
* linked combinations including the program with the OpenSSL library. You
* must comply with the GNU Affero General Public License in all respects for
* all of the code used other than as permitted herein. If you modify file(s)
* with this exception, you may extend this exception to your version of the
* file(s), but you are not obligated to do so. If you do not wish to do so,
* delete this exception statement from your version. If you delete this
* exception statement from all source files in the program, then also delete
* it in the license file.
*/
#define MONGO_LOG_DEFAULT_COMPONENT ::mongo::logger::LogComponent::kReplication
#include "mongo/platform/basic.h"
#include "mongo/platform/bits.h"
#include "mongo/db/repl/sync_tail.h"
#include <boost/functional/hash.hpp>
#include <boost/ref.hpp>
#include "third_party/murmurhash3/MurmurHash3.h"
#include "mongo/base/counter.h"
#include "mongo/db/auth/authorization_session.h"
#include "mongo/db/catalog/database.h"
#include "mongo/db/catalog/database_holder.h"
#include "mongo/db/commands/fsync.h"
#include "mongo/db/commands/server_status_metric.h"
#include "mongo/db/concurrency/write_conflict_exception.h"
#include "mongo/db/curop.h"
#include "mongo/db/global_environment_experiment.h"
#include "mongo/db/prefetch.h"
#include "mongo/db/repl/bgsync.h"
#include "mongo/db/repl/minvalid.h"
#include "mongo/db/repl/oplog.h"
#include "mongo/db/repl/replication_coordinator_global.h"
#include "mongo/db/stats/timer_stats.h"
#include "mongo/db/operation_context_impl.h"
#include "mongo/util/exit.h"
#include "mongo/util/fail_point_service.h"
#include "mongo/util/log.h"
namespace mongo {
namespace repl {
#if defined(MONGO_PLATFORM_64)
const int replWriterThreadCount = 16;
const int replPrefetcherThreadCount = 16;
#elif defined(MONGO_PLATFORM_32)
const int replWriterThreadCount = 2;
const int replPrefetcherThreadCount = 2;
#else
#error need to include something that defines MONGO_PLATFORM_XX
#endif
static Counter64 opsAppliedStats;
//The oplog entries applied
static ServerStatusMetricField<Counter64> displayOpsApplied( "repl.apply.ops",
&opsAppliedStats );
MONGO_FP_DECLARE(rsSyncApplyStop);
// Number and time of each ApplyOps worker pool round
static TimerStats applyBatchStats;
static ServerStatusMetricField<TimerStats> displayOpBatchesApplied(
"repl.apply.batches",
&applyBatchStats );
void initializePrefetchThread() {
if (!ClientBasic::getCurrent()) {
Client::initThreadIfNotAlready();
cc().getAuthorizationSession()->grantInternalAuthorization();
}
}
namespace {
bool isCrudOpType( const char* field ) {
switch ( field[0] ) {
case 'd':
case 'i':
case 'u':
return field[1] == 0;
}
return false;
}
size_t hashBSONObj(const BSONObj& obj);
size_t hashBSONElement(const BSONElement& elem) {
size_t hash = 0;
boost::hash_combine(hash, elem.canonicalType());
const StringData fieldName = elem.fieldNameStringData();
if (!fieldName.empty()) {
boost::hash_combine(hash, StringData::Hasher()(fieldName));
}
switch (elem.type()) {
// Order of types is the same as in compareElementValues().
case mongo::EOO:
case mongo::Undefined:
case mongo::jstNULL:
case mongo::MaxKey:
case mongo::MinKey:
// These are valueless types
break;
case mongo::Bool:
boost::hash_combine(hash, elem.boolean());
break;
case mongo::Timestamp:
boost::hash_combine(hash, elem._opTime().asDate());
break;
case mongo::Date:
boost::hash_combine(hash, elem.date().asInt64());
break;
case mongo::NumberDouble:
case mongo::NumberLong:
case mongo::NumberInt: {
// This converts all numbers to doubles, which ignores the low-order bits of
// NumberLongs > 2**53, but that is ok since the hash will still be the same for
// equal numbers and is still likely to be different for different numbers.
const double dbl = elem.numberDouble();
if (isNaN(dbl)) {
boost::hash_combine(hash, numeric_limits<double>::quiet_NaN());
}
else {
boost::hash_combine(hash, dbl);
}
break;
}
case mongo::jstOID:
elem.__oid().hash_combine(hash);
break;
case mongo::Code:
case mongo::Symbol:
case mongo::String:
boost::hash_combine(hash, StringData::Hasher()(elem.valueStringData()));
break;
case mongo::Object:
case mongo::Array:
boost::hash_combine(hash, hashBSONObj(elem.embeddedObject()));
break;
case mongo::DBRef:
case mongo::BinData:
// All bytes of the value are required to be identical.
boost::hash_combine(hash, StringData::Hasher()(StringData(elem.value(),
elem.valuesize())));
break;
case mongo::RegEx:
boost::hash_combine(hash, StringData::Hasher()(elem.regex()));
boost::hash_combine(hash, StringData::Hasher()(elem.regexFlags()));
break;
case mongo::CodeWScope: {
boost::hash_combine(hash, StringData::Hasher()(
StringData(elem.codeWScopeCode(),
elem.codeWScopeCodeLen())));
boost::hash_combine(hash, hashBSONObj(elem.codeWScopeObject()));
break;
}
}
return hash;
}
size_t hashBSONObj(const BSONObj& obj) {
size_t hash = 0;
BSONForEach(elem, obj) {
boost::hash_combine(hash, hashBSONElement(elem));
}
return hash;
}
}
SyncTail::SyncTail(BackgroundSyncInterface *q, MultiSyncApplyFunc func) :
Sync(""),
_networkQueue(q),
_applyFunc(func),
_writerPool(replWriterThreadCount, "repl writer worker "),
_prefetcherPool(replPrefetcherThreadCount, "repl prefetch worker ")
{}
SyncTail::~SyncTail() {}
bool SyncTail::peek(BSONObj* op) {
return _networkQueue->peek(op);
}
/* apply the log op that is in param o
@return bool success (true) or failure (false)
*/
bool SyncTail::syncApply(
OperationContext* txn, const BSONObj &op, bool convertUpdateToUpsert) {
if (inShutdown()) {
return true;
}
const char *ns = op.getStringField("ns");
verify(ns);
if ( (*ns == '\0') || (*ns == '.') ) {
// this is ugly
// this is often a no-op
// but can't be 100% sure
if( *op.getStringField("op") != 'n' ) {
error() << "replSet skipping bad op in oplog: " << op.toString();
}
return true;
}
const char* opType = op["op"].valuestrsafe();
bool isCommand(opType[0] == 'c');
for ( int createCollection = 0; createCollection < 2; createCollection++ ) {
try {
boost::scoped_ptr<Lock::ScopedLock> lk;
boost::scoped_ptr<Lock::CollectionLock> lk2;
bool isIndexBuild = opType[0] == 'i' &&
nsToCollectionSubstring( ns ) == "system.indexes";
if (isCommand) {
// a command may need a global write lock. so we will conservatively go
// ahead and grab one here. suboptimal. :-(
lk.reset(new Lock::GlobalWrite(txn->lockState()));
}
else if (isIndexBuild) {
lk.reset(new Lock::DBLock(txn->lockState(), nsToDatabaseSubstring(ns), MODE_X));
}
else if (isCrudOpType(opType)) {
LockMode mode = createCollection ? MODE_X : MODE_IX;
lk.reset(new Lock::DBLock(txn->lockState(), nsToDatabaseSubstring(ns), mode));
lk2.reset(new Lock::CollectionLock(txn->lockState(), ns, mode));
if (!createCollection && !dbHolder().get(txn, nsToDatabaseSubstring(ns))) {
// need to create database, try again
continue;
}
}
else {
// Unknown op?
lk.reset(new Lock::DBLock(txn->lockState(), nsToDatabaseSubstring(ns), MODE_X));
}
Client::Context ctx(txn, ns);
ctx.getClient()->curop()->reset();
if ( createCollection == 0 &&
!isIndexBuild &&
isCrudOpType(opType) &&
ctx.db()->getCollection(ns) == NULL ) {
// uh, oh, we need to create collection
// try again
continue;
}
// For non-initial-sync, we convert updates to upserts
// to suppress errors when replaying oplog entries.
bool ok = !applyOperation_inlock(txn, ctx.db(), op, true, convertUpdateToUpsert);
opsAppliedStats.increment();
return ok;
}
catch ( const WriteConflictException& wce ) {
log() << "WriteConflictException while doing oplog application on: " << ns
<< ", retrying.";
createCollection--;
}
}
invariant(!"impossible");
}
// The pool threads call this to prefetch each op
void SyncTail::prefetchOp(const BSONObj& op) {
initializePrefetchThread();
const char *ns = op.getStringField("ns");
if (ns && (ns[0] != '\0')) {
try {
// one possible tweak here would be to stay in the read lock for this database
// for multiple prefetches if they are for the same database.
OperationContextImpl txn;
AutoGetCollectionForRead ctx(&txn, ns);
Database* db = ctx.getDb();
if (db) {
prefetchPagesForReplicatedOp(&txn, db, op);
}
}
catch (const DBException& e) {
LOG(2) << "ignoring exception in prefetchOp(): " << e.what() << endl;
}
catch (const std::exception& e) {
log() << "Unhandled std::exception in prefetchOp(): " << e.what() << endl;
fassertFailed(16397);
}
}
}
// Doles out all the work to the reader pool threads and waits for them to complete
void SyncTail::prefetchOps(const std::deque<BSONObj>& ops) {
for (std::deque<BSONObj>::const_iterator it = ops.begin();
it != ops.end();
++it) {
_prefetcherPool.schedule(&prefetchOp, *it);
}
_prefetcherPool.join();
}
// Doles out all the work to the writer pool threads and waits for them to complete
void SyncTail::applyOps(const std::vector< std::vector<BSONObj> >& writerVectors) {
TimerHolder timer(&applyBatchStats);
for (std::vector< std::vector<BSONObj> >::const_iterator it = writerVectors.begin();
it != writerVectors.end();
++it) {
if (!it->empty()) {
_writerPool.schedule(_applyFunc, boost::cref(*it), this);
}
}
_writerPool.join();
}
// Doles out all the work to the writer pool threads and waits for them to complete
OpTime SyncTail::multiApply(OperationContext* txn, std::deque<BSONObj>& ops) {
if (getGlobalEnvironment()->getGlobalStorageEngine()->isMmapV1()) {
// Use a ThreadPool to prefetch all the operations in a batch.
prefetchOps(ops);
}
std::vector< std::vector<BSONObj> > writerVectors(replWriterThreadCount);
fillWriterVectors(ops, &writerVectors);
LOG(2) << "replication batch size is " << ops.size() << endl;
// We must grab this because we're going to grab write locks later.
// We hold this mutex the entire time we're writing; it doesn't matter
// because all readers are blocked anyway.
SimpleMutex::scoped_lock fsynclk(filesLockedFsync);
// stop all readers until we're done
Lock::ParallelBatchWriterMode pbwm;
ReplicationCoordinator* replCoord = getGlobalReplicationCoordinator();
if (replCoord->getMemberState().primary() &&
!replCoord->isWaitingForApplierToDrain()) {
severe() << "attempting to replicate ops while primary";
fassertFailed(28527);
}
applyOps(writerVectors);
return applyOpsToOplog(txn, &ops);
}
void SyncTail::fillWriterVectors(const std::deque<BSONObj>& ops,
std::vector< std::vector<BSONObj> >* writerVectors) {
for (std::deque<BSONObj>::const_iterator it = ops.begin();
it != ops.end();
++it) {
const BSONElement e = it->getField("ns");
verify(e.type() == String);
const char* ns = e.valuestr();
int len = e.valuestrsize();
uint32_t hash = 0;
MurmurHash3_x86_32( ns, len, 0, &hash);
const char* opType = it->getField( "op" ).valuestrsafe();
if (getGlobalEnvironment()->getGlobalStorageEngine()->supportsDocLocking() &&
isCrudOpType(opType)) {
BSONElement id;
switch (opType[0]) {
case 'u':
id = it->getField("o2").Obj()["_id"];
break;
case 'd':
case 'i':
id = it->getField("o").Obj()["_id"];
break;
}
const size_t idHash = hashBSONElement( id );
MurmurHash3_x86_32(&idHash, sizeof(idHash), hash, &hash);
}
(*writerVectors)[hash % writerVectors->size()].push_back(*it);
}
}
void SyncTail::oplogApplication(OperationContext* txn, const OpTime& endOpTime) {
_applyOplogUntil(txn, endOpTime);
}
/* applies oplog from "now" until endOpTime using the applier threads for initial sync*/
void SyncTail::_applyOplogUntil(OperationContext* txn, const OpTime& endOpTime) {
unsigned long long bytesApplied = 0;
unsigned long long entriesApplied = 0;
while (true) {
OpQueue ops;
while (!tryPopAndWaitForMore(txn, &ops, getGlobalReplicationCoordinator())) {
// nothing came back last time, so go again
if (ops.empty()) continue;
// Check if we reached the end
const BSONObj currentOp = ops.back();
const OpTime currentOpTime = currentOp["ts"]._opTime();
// When we reach the end return this batch
if (currentOpTime == endOpTime) {
break;
}
else if (currentOpTime > endOpTime) {
severe() << "Applied past expected end " << endOpTime << " to " << currentOpTime
<< " without seeing it. Rollback?";
fassertFailedNoTrace(18693);
}
// apply replication batch limits
if (ops.getSize() > replBatchLimitBytes)
break;
if (ops.getDeque().size() > replBatchLimitOperations)
break;
};
if (ops.empty()) {
severe() << "got no ops for batch...";
fassertFailedNoTrace(18692);
}
const BSONObj lastOp = ops.back().getOwned();
// Tally operation information
bytesApplied += ops.getSize();
entriesApplied += ops.getDeque().size();
const OpTime lastOpTime = multiApply(txn, ops.getDeque());
// if the last op applied was our end, return
if (lastOpTime == endOpTime) {
LOG(1) << "SyncTail applied " << entriesApplied
<< " entries (" << bytesApplied << " bytes)"
<< " and finished at opTime " << endOpTime.toStringPretty();
return;
}
} // end of while (true)
}
namespace {
void tryToGoLiveAsASecondary(OperationContext* txn, ReplicationCoordinator* replCoord) {
if (replCoord->isInPrimaryOrSecondaryState()) {
return;
}
ScopedTransaction transaction(txn, MODE_S);
Lock::GlobalRead readLock(txn->lockState());
if (replCoord->getMaintenanceMode()) {
// we're not actually going live
return;
}
// Only state RECOVERING can transition to SECONDARY.
MemberState state(replCoord->getMemberState());
if (!state.recovering()) {
return;
}
OpTime minvalid = getMinValid(txn);
if (minvalid > replCoord->getMyLastOptime()) {
return;
}
bool worked = replCoord->setFollowerMode(MemberState::RS_SECONDARY);
if (!worked) {
warning() << "Failed to transition into " << MemberState(MemberState::RS_SECONDARY)
<< ". Current state: " << replCoord->getMemberState();
}
}
}
/* tail an oplog. ok to return, will be re-called. */
void SyncTail::oplogApplication() {
ReplicationCoordinator* replCoord = getGlobalReplicationCoordinator();
while(!inShutdown()) {
OpQueue ops;
OperationContextImpl txn;
Timer batchTimer;
int lastTimeChecked = 0;
do {
int now = batchTimer.seconds();
// apply replication batch limits
if (!ops.empty()) {
if (now > replBatchLimitSeconds)
break;
if (ops.getDeque().size() > replBatchLimitOperations)
break;
}
// occasionally check some things
// (always checked in the first iteration of this do-while loop, because
// ops is empty)
if (ops.empty() || now > lastTimeChecked) {
BackgroundSync* bgsync = BackgroundSync::get();
if (bgsync->getInitialSyncRequestedFlag()) {
// got a resync command
return;
}
lastTimeChecked = now;
// can we become secondary?
// we have to check this before calling mgr, as we must be a secondary to
// become primary
tryToGoLiveAsASecondary(&txn, replCoord);
}
const int slaveDelaySecs = replCoord->getSlaveDelaySecs().total_seconds();
if (!ops.empty() && slaveDelaySecs > 0) {
const BSONObj& lastOp = ops.getDeque().back();
const unsigned int opTimestampSecs = lastOp["ts"]._opTime().getSecs();
// Stop the batch as the lastOp is too new to be applied. If we continue
// on, we can get ops that are way ahead of the delay and this will
// make this thread sleep longer when handleSlaveDelay is called
// and apply ops much sooner than we like.
if (opTimestampSecs > static_cast<unsigned int>(time(0) - slaveDelaySecs)) {
break;
}
}
// keep fetching more ops as long as we haven't filled up a full batch yet
} while (!tryPopAndWaitForMore(&txn, &ops, replCoord) && // tryPopAndWaitForMore returns
// true when we need to end a
// batch early
(ops.getSize() < replBatchLimitBytes) &&
!inShutdown());
// For pausing replication in tests
while (MONGO_FAIL_POINT(rsSyncApplyStop)) {
sleepmillis(0);
}
if (ops.empty()) {
continue;
}
const BSONObj& lastOp = ops.getDeque().back();
handleSlaveDelay(lastOp);
// Set minValid to the last op to be applied in this next batch.
// This will cause this node to go into RECOVERING state
// if we should crash and restart before updating the oplog
OpTime minValid = lastOp["ts"]._opTime();
setMinValid(&txn, minValid);
multiApply(&txn, ops.getDeque());
}
}
// Copies ops out of the bgsync queue into the deque passed in as a parameter.
// Returns true if the batch should be ended early.
// Batch should end early if we encounter a command, or if
// there are no further ops in the bgsync queue to read.
// This function also blocks 1 second waiting for new ops to appear in the bgsync
// queue. We can't block forever because there are maintenance things we need
// to periodically check in the loop.
bool SyncTail::tryPopAndWaitForMore(OperationContext* txn,
SyncTail::OpQueue* ops,
ReplicationCoordinator* replCoord) {
BSONObj op;
// Check to see if there are ops waiting in the bgsync queue
bool peek_success = peek(&op);
if (!peek_success) {
// if we don't have anything in the queue, wait a bit for something to appear
if (ops->empty()) {
replCoord->signalDrainComplete(txn);
// block up to 1 second
_networkQueue->waitForMore();
return false;
}
// otherwise, apply what we have
return true;
}
const char* ns = op["ns"].valuestrsafe();
// check for commands
if ((op["op"].valuestrsafe()[0] == 'c') ||
// Index builds are acheived through the use of an insert op, not a command op.
// The following line is the same as what the insert code uses to detect an index build.
( *ns != '\0' && nsToCollectionSubstring(ns) == "system.indexes" )) {
if (ops->empty()) {
// apply commands one-at-a-time
ops->push_back(op);
_networkQueue->consume();
}
// otherwise, apply what we have so far and come back for the command
return true;
}
// check for oplog version change
BSONElement elemVersion = op["v"];
int curVersion = 0;
if (elemVersion.eoo())
// missing version means version 1
curVersion = 1;
else
curVersion = elemVersion.Int();
if (curVersion != OPLOG_VERSION) {
severe() << "expected oplog version " << OPLOG_VERSION << " but found version "
<< curVersion << " in oplog entry: " << op;
fassertFailedNoTrace(18820);
}
// Copy the op to the deque and remove it from the bgsync queue.
ops->push_back(op);
_networkQueue->consume();
// Go back for more ops
return false;
}
OpTime SyncTail::applyOpsToOplog(OperationContext* txn, std::deque<BSONObj>* ops) {
OpTime lastOpTime;
{
ScopedTransaction transaction(txn, MODE_IX);
Lock::DBLock lk(txn->lockState(), "local", MODE_X);
WriteUnitOfWork wunit(txn);
while (!ops->empty()) {
const BSONObj& op = ops->front();
// this updates lastOpTimeApplied
lastOpTime = _logOpObjRS(txn, op);
ops->pop_front();
}
wunit.commit();
}
// This call may result in us assuming PRIMARY role if we'd been waiting for our sync
// buffer to drain and it's now empty. This will acquire a global lock to drop all
// temp collections, so we must release the above lock on the local database before
// doing so.
BackgroundSync::get()->notify(txn);
return lastOpTime;
}
void SyncTail::handleSlaveDelay(const BSONObj& lastOp) {
ReplicationCoordinator* replCoord = getGlobalReplicationCoordinator();
int slaveDelaySecs = replCoord->getSlaveDelaySecs().total_seconds();
// ignore slaveDelay if the box is still initializing. once
// it becomes secondary we can worry about it.
if( slaveDelaySecs > 0 && replCoord->getMemberState().secondary() ) {
const OpTime ts = lastOp["ts"]._opTime();
long long a = ts.getSecs();
long long b = time(0);
long long lag = b - a;
long long sleeptime = slaveDelaySecs - lag;
if( sleeptime > 0 ) {
uassert(12000, "rs slaveDelay differential too big check clocks and systems",
sleeptime < 0x40000000);
if( sleeptime < 60 ) {
sleepsecs((int) sleeptime);
}
else {
warning() << "replSet slavedelay causing a long sleep of " << sleeptime
<< " seconds";
// sleep(hours) would prevent reconfigs from taking effect & such!
long long waitUntil = b + sleeptime;
while(time(0) < waitUntil) {
sleepsecs(6);
// Handle reconfigs that changed the slave delay
if (replCoord->getSlaveDelaySecs().total_seconds() != slaveDelaySecs)
break;
}
}
}
} // endif slaveDelay
}
static AtomicUInt32 replWriterWorkerId;
static void initializeWriterThread() {
// Only do this once per thread
if (!ClientBasic::getCurrent()) {
Client::initThreadIfNotAlready();
cc().getAuthorizationSession()->grantInternalAuthorization();
}
}
// This free function is used by the writer threads to apply each op
void multiSyncApply(const std::vector<BSONObj>& ops, SyncTail* st) {
initializeWriterThread();
OperationContextImpl txn;
// allow us to get through the magic barrier
Lock::ParallelBatchWriterMode::iAmABatchParticipant(txn.lockState());
bool convertUpdatesToUpserts = true;
for (std::vector<BSONObj>::const_iterator it = ops.begin();
it != ops.end();
++it) {
try {
if (!st->syncApply(&txn, *it, convertUpdatesToUpserts)) {
fassertFailedNoTrace(16359);
}
}
catch (const DBException& e) {
error() << "writer worker caught exception: " << causedBy(e)
<< " on: " << it->toString();
if (inShutdown()) {
return;
}
fassertFailedNoTrace(16360);
}
}
}
// This free function is used by the initial sync writer threads to apply each op
void multiInitialSyncApply(const std::vector<BSONObj>& ops, SyncTail* st) {
initializeWriterThread();
OperationContextImpl txn;
// allow us to get through the magic barrier
Lock::ParallelBatchWriterMode::iAmABatchParticipant(txn.lockState());
for (std::vector<BSONObj>::const_iterator it = ops.begin();
it != ops.end();
++it) {
try {
if (!st->syncApply(&txn, *it)) {
if (st->shouldRetry(&txn, *it)) {
if (!st->syncApply(&txn, *it)) {
fassertFailedNoTrace(15915);
}
}
// If shouldRetry() returns false, fall through.
// This can happen if the document that was moved and missed by Cloner
// subsequently got deleted and no longer exists on the Sync Target at all
}
}
catch (const DBException& e) {
error() << "writer worker caught exception: " << causedBy(e)
<< " on: " << it->toString();
if (inShutdown()) {
return;
}
fassertFailedNoTrace(16361);
}
}
}
} // namespace repl
} // namespace mongo
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