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+#!/usr/local/bin/perl
+##############################################################################
+# Time-stamp: <Sat Oct 28 1995 23:15:13 Stardate: [-31]6509.63 hwloidl>
+#
+# Usage: do ....
+#
+# Statistics package that is used in gran-extr, RTS2gran and friends.
+# Most of the routines assume a list of integers as input.
+# This package contains:
+# - corr
+# - mean_std_dev
+# - cov
+# - list_sum
+# - list_max
+# - list_min
+#
+##############################################################################
+
+# ----------------------------------------------------------------------------
+# Compute correlation of 2 vectors, having their sums precomputed.
+# Usage: do corr(($n, $sum_1, @rest);
+#
+# Input: $n ... number of all elements in @list_1 as well as in @list_2
+# (i.e. $n = $#list_1+1 = $#list_2+1).
+# $sum_1 ... sum of all elements in @list_1
+# @list_1 ... list of integers; first vector
+# $sum_2 ... sum of all elements in @list_2
+# @list_2 ... list of integers; first vector
+# Output: correlation of @list_1 and @list_2
+# ----------------------------------------------------------------------------
+
+sub corr {
+ local ($n, $sum_1, @rest) = @_;
+ local (@list_1) = splice(@rest,0,$n);
+ local ($sum_2, @list_2) = @rest;
+
+ local ($mean_1,$mean_2,$std_dev_1,$std_dev_2);
+
+ if ( $opt_D ) {
+ print "\ncorr: n=$n sum_1=$sum_1 sum_2=$sum_2\n";
+ print " list_sum of list_1=" . &list_sum(@list_1) .
+ " list_sum of list_2=" . &list_sum(@list_2) . "\n";
+ print " len of list_1=$#list_1 len of list_2=$#list_2\n";
+ }
+
+ ($mean_1, $std_dev_1) = &mean_std_dev($sum_1,@list_1);
+ ($mean_2, $std_dev_2) = &mean_std_dev($sum_2,@list_2);
+
+ if ( $opt_D ) {
+ print "corr: $mean_1, $std_dev_1; $mean_2, $std_dev_2\n";
+ }
+
+ return ( ($std_dev_1 * $std_dev_2) == 0 ?
+ 0 :
+ &cov($n, $mean_1, @list_1, $mean_2, @list_2) /
+ ( $std_dev_1 * $std_dev_2 ) );
+}
+
+# ----------------------------------------------------------------------------
+
+sub mean_std_dev {
+ local ($sum,@list) = @_;
+ local ($n, $s, $s_);
+
+ #print "\nmean_std_dev: sum is $sum ; list has length $#list";
+
+ $n = $#list+1;
+ $mean_value = $sum/$n;
+
+ $s_ = 0;
+ foreach $x (@list) {
+ $s_ += $x;
+ $s += ($mean_value - $x) ** 2;
+ }
+ if ( $sum != $s_ ) {
+ print "stat.pl: ERROR in mean_std_dev: provided sum is wrong " .
+ "(provided: $sum; computed: $s_ " .
+ ";list_sum: " . &list_sum(@list) . "\n";
+ exit (2);
+ }
+
+ return ( ($mean_value, sqrt($s / ($n - 1)) ) );
+}
+
+# ----------------------------------------------------------------------------
+
+sub _mean_std_dev {
+ return ( &mean_std_dev(&list_sum(@_), @_) );
+}
+
+# ----------------------------------------------------------------------------
+# Compute covariance of 2 vectors, having their sums precomputed.
+# Input: $n ... number of all elements in @list_1 as well as in @list_2
+# (i.e. $n = $#list_1+1 = $#list_2+1).
+# $mean_1 ... mean value of all elements in @list_1
+# @list_1 ... list of integers; first vector
+# $mean_2 ... mean value of all elements in @list_2
+# @list_2 ... list of integers; first vector
+# Output: covariance of @list_1 and @list_2
+# ----------------------------------------------------------------------------
+
+sub cov {
+ local ($n, $mean_1, @rest) = @_;
+ local (@list_1) = splice(@rest,0,$n);
+ local ($mean_2, @list_2) = @rest;
+
+ local ($i,$s,$s_1,$s_2);
+
+ for ($i=0; $i<$n; $i++) {
+ $s_1 += $list_1[$i];
+ $s_2 += $list_2[$i];
+ $s += ($mean_1 - $list_1[$i]) * ($mean_2 - $list_2[$i]);
+ }
+ if ( $mean_1 != ($s_1/$n) ) {
+ print "stat.pl: ERROR in cov: provided mean value is wrong " .
+ "(provided: $mean_1; computed: " . ($s_1/$n) . ")\n";
+ exit (2);
+ }
+ if ( $mean_2 != ($s_2/$n) ) {
+ print "stat.pl: ERROR in cov: provided mean value is wrong " .
+ "(provided: $mean_2; computed: " . ($s_2/$n) . ")\n";
+ exit (2);
+ }
+ return ( $s / ($n - 1) ) ;
+}
+
+# ---------------------------------------------------------------------------
+
+sub list_sum {
+ local (@list) = @_;
+ local ($sum) = (0);
+
+ foreach $x (@list) {
+ $sum += $x;
+ }
+
+ return ($sum);
+}
+
+# ----------------------------------------------------------------------------
+
+sub list_max {
+ local (@list) = @_;
+ local ($max) = shift;
+
+ foreach $x (@list) {
+ $max = $x if $x > $max;
+ }
+
+ return ($max);
+}
+
+# ----------------------------------------------------------------------------
+
+sub list_min {
+ local (@list) = @_;
+ local ($min) = shift;
+
+ foreach $x (@list) {
+ $min = $x if $x < $min;
+ }
+
+ return ($min);
+}
+
+# ----------------------------------------------------------------------------
+
+1;