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authorLuke Chen <luke.chen@mongodb.com>2020-06-09 11:09:18 +1000
committerEvergreen Agent <no-reply@evergreen.mongodb.com>2020-06-09 01:51:32 +0000
commit43d25964249164d76d5e04dd6cf38f6111e21f5f (patch)
tree007dc4ed1659f7a0ee62ba3f38cb055823b85e3d
parent3109036c252b774693128e793d6cbede7d5e420b (diff)
downloadmongo-r4.2.8.tar.gz
Import wiredtiger: 8f7554c85299a49079c7f06290909f791678b794 from branch mongodb-4.2r4.2.8-rc0r4.2.8
ref: 8de74488f2..8f7554c852 for: 4.2.8 WT-6366 Off-by-one overflow in block-modification bitmaps for incremental backup
-rw-r--r--src/third_party/wiredtiger/dist/api_data.py2
-rw-r--r--src/third_party/wiredtiger/import.data2
-rw-r--r--src/third_party/wiredtiger/src/block/block_ckpt.c13
-rw-r--r--src/third_party/wiredtiger/src/config/config_def.c2
-rw-r--r--src/third_party/wiredtiger/src/include/wiredtiger.in2
-rw-r--r--src/third_party/wiredtiger/test/csuite/incr_backup/main.c19
-rw-r--r--src/third_party/wiredtiger/test/format/backup.c7
-rw-r--r--src/third_party/wiredtiger/test/format/config.c48
-rw-r--r--src/third_party/wiredtiger/test/format/config.h3
-rw-r--r--src/third_party/wiredtiger/test/format/format.h1
10 files changed, 80 insertions, 19 deletions
diff --git a/src/third_party/wiredtiger/dist/api_data.py b/src/third_party/wiredtiger/dist/api_data.py
index a5df6227eee..5eb48bcda59 100644
--- a/src/third_party/wiredtiger/dist/api_data.py
+++ b/src/third_party/wiredtiger/dist/api_data.py
@@ -1245,7 +1245,7 @@ methods = {
this setting manages the granularity of how WiredTiger maintains modification
maps internally. The larger the granularity, the smaller amount of information
WiredTiger need to maintain''',
- min='1MB', max='2GB'),
+ min='4KB', max='2GB'),
Config('src_id', '', r'''
a string that identifies a previous checkpoint backup source as the source
of this incremental backup. This identifier must have already been created
diff --git a/src/third_party/wiredtiger/import.data b/src/third_party/wiredtiger/import.data
index 28314b55190..95527d5ba06 100644
--- a/src/third_party/wiredtiger/import.data
+++ b/src/third_party/wiredtiger/import.data
@@ -2,5 +2,5 @@
"vendor": "wiredtiger",
"github": "wiredtiger/wiredtiger.git",
"branch": "mongodb-4.2",
- "commit": "8de74488f2bb2b5cba0404c345f568a2f72478d3"
+ "commit": "8f7554c85299a49079c7f06290909f791678b794"
}
diff --git a/src/third_party/wiredtiger/src/block/block_ckpt.c b/src/third_party/wiredtiger/src/block/block_ckpt.c
index 1a148606741..4f41c5f0120 100644
--- a/src/third_party/wiredtiger/src/block/block_ckpt.c
+++ b/src/third_party/wiredtiger/src/block/block_ckpt.c
@@ -355,16 +355,16 @@ __ckpt_add_blkmod_entry(
WT_ASSERT(session, blk_mod->granularity != 0);
/*
- * Figure out how the starting and ending bits based on the granularity and our offset and
- * length.
+ * Figure out the starting and ending locations in the bitmap based on its granularity and our
+ * offset and length. The bit locations are zero-based; be careful translating to sizes.
*/
start_bit = (uint64_t)offset / blk_mod->granularity;
end_bit = (uint64_t)(offset + len - 1) / blk_mod->granularity;
WT_ASSERT(session, end_bit < UINT32_MAX);
/* We want to grow the bitmap by 64 bits, or 8 bytes at a time. */
- end_rdup_bits = WT_MAX(__wt_rduppo2((uint32_t)end_bit, 64), WT_BLOCK_MODS_LIST_MIN);
- end_rdup_bytes = end_rdup_bits >> 3;
- end_buf_bytes = (uint32_t)blk_mod->nbits >> 3;
+ end_rdup_bits = WT_MAX(__wt_rduppo2((uint32_t)end_bit + 1, 64), WT_BLOCK_MODS_LIST_MIN);
+ end_rdup_bytes = __bitstr_size(end_rdup_bits);
+ end_buf_bytes = __bitstr_size((uint32_t)blk_mod->nbits);
/*
* We are doing a lot of shifting. Make sure that the number of bytes we end up with is a
* multiple of eight. We guarantee that in the rounding up call, but also make sure that the
@@ -384,6 +384,9 @@ __ckpt_add_blkmod_entry(
}
blk_mod->nbits = end_rdup_bits;
}
+ /* Make sure we're not going to run past the end of the bitmap */
+ WT_ASSERT(session, blk_mod->bitstring.size >= __bitstr_size((uint32_t)blk_mod->nbits));
+ WT_ASSERT(session, end_bit < blk_mod->nbits);
/* Set all the bits needed to record this offset/length pair. */
__bit_nset(blk_mod->bitstring.mem, start_bit, end_bit);
return (0);
diff --git a/src/third_party/wiredtiger/src/config/config_def.c b/src/third_party/wiredtiger/src/config/config_def.c
index bba4a9b914b..531af81ae00 100644
--- a/src/third_party/wiredtiger/src/config/config_def.c
+++ b/src/third_party/wiredtiger/src/config/config_def.c
@@ -297,7 +297,7 @@ static const WT_CONFIG_CHECK confchk_WT_SESSION_log_flush[] = {
static const WT_CONFIG_CHECK confchk_WT_SESSION_open_cursor_incremental_subconfigs[] = {
{"enabled", "boolean", NULL, NULL, NULL, 0}, {"file", "string", NULL, NULL, NULL, 0},
{"force_stop", "boolean", NULL, NULL, NULL, 0},
- {"granularity", "int", NULL, "min=1MB,max=2GB", NULL, 0},
+ {"granularity", "int", NULL, "min=4KB,max=2GB", NULL, 0},
{"src_id", "string", NULL, NULL, NULL, 0}, {"this_id", "string", NULL, NULL, NULL, 0},
{NULL, NULL, NULL, NULL, NULL, 0}};
diff --git a/src/third_party/wiredtiger/src/include/wiredtiger.in b/src/third_party/wiredtiger/src/include/wiredtiger.in
index d9f691e8630..abf55b4bc14 100644
--- a/src/third_party/wiredtiger/src/include/wiredtiger.in
+++ b/src/third_party/wiredtiger/src/include/wiredtiger.in
@@ -1081,7 +1081,7 @@ struct __wt_session {
* @config{&nbsp;&nbsp;&nbsp;&nbsp;granularity,
* this setting manages the granularity of how WiredTiger maintains modification maps
* internally. The larger the granularity\, the smaller amount of information WiredTiger
- * need to maintain., an integer between 1MB and 2GB; default \c 16MB.}
+ * need to maintain., an integer between 4KB and 2GB; default \c 16MB.}
* @config{&nbsp;&nbsp;&nbsp;&nbsp;src_id, a string that identifies a previous checkpoint
* backup source as the source of this incremental backup. This identifier must have
* already been created by use of the 'this_id' configuration in an earlier backup. A
diff --git a/src/third_party/wiredtiger/test/csuite/incr_backup/main.c b/src/third_party/wiredtiger/test/csuite/incr_backup/main.c
index 2c8893780eb..8a5a67ec760 100644
--- a/src/third_party/wiredtiger/test/csuite/incr_backup/main.c
+++ b/src/third_party/wiredtiger/test/csuite/incr_backup/main.c
@@ -460,6 +460,7 @@ base_backup(WT_CONNECTION *conn, WT_RAND_STATE *rand, const char *home, const ch
int nfiles, ret;
char buf[4096];
char *filename;
+ char granularity_unit;
nfiles = 0;
@@ -474,14 +475,18 @@ base_backup(WT_CONNECTION *conn, WT_RAND_STATE *rand, const char *home, const ch
testutil_check(conn->open_session(conn, NULL, NULL, &session));
tinfo->full_backup_number = tinfo->incr_backup_number++;
- /* Half of the runs with a low granularity: 1M */
- if (__wt_random(rand) % 2 == 0)
- granularity = 1;
- else
- granularity = 1 + __wt_random(rand) % 20;
+ /* Half of the runs with very low granularity to stress bitmaps */
+ granularity = __wt_random(rand) % 20;
+ if (__wt_random(rand) % 2 == 0) {
+ granularity_unit = 'K';
+ granularity += 4;
+ } else {
+ granularity_unit = 'M';
+ granularity += 1;
+ }
testutil_check(__wt_snprintf(buf, sizeof(buf),
- "incremental=(granularity=%" PRIu32 "M,enabled=true,this_id=ID%d)", granularity,
- (int)tinfo->full_backup_number));
+ "incremental=(granularity=%" PRIu32 "%c,enabled=true,this_id=ID%d)", granularity,
+ granularity_unit, (int)tinfo->full_backup_number));
VERBOSE(3, "open_cursor(session, \"backup:\", NULL, \"%s\", &cursor)\n", buf);
testutil_check(session->open_cursor(session, "backup:", NULL, buf, &cursor));
diff --git a/src/third_party/wiredtiger/test/format/backup.c b/src/third_party/wiredtiger/test/format/backup.c
index 5ad1cfe65dc..66d859849a5 100644
--- a/src/third_party/wiredtiger/test/format/backup.c
+++ b/src/third_party/wiredtiger/test/format/backup.c
@@ -388,15 +388,16 @@ backup(void *arg)
if (g.c_backup_incr_flag == INCREMENTAL_BLOCK) {
/*
* If we're doing a full backup as the start of the incremental backup, only send in an
- * identifier for this one.
+ * identifier for this one. Also set the block granularity.
*/
if (incr_full) {
active_files_free(&active[0]);
active_files_free(&active[1]);
active_now = &active[g.backup_id % 2];
active_prev = NULL;
- testutil_check(__wt_snprintf(
- cfg, sizeof(cfg), "incremental=(enabled,this_id=ID%" PRIu64 ")", g.backup_id++));
+ testutil_check(__wt_snprintf(cfg, sizeof(cfg),
+ "incremental=(enabled,granularity=%" PRIu32 "K,this_id=ID%" PRIu64 ")",
+ g.c_backup_incr_granularity, g.backup_id++));
full = true;
incr_full = false;
} else {
diff --git a/src/third_party/wiredtiger/test/format/config.c b/src/third_party/wiredtiger/test/format/config.c
index eb86c0860e7..de68fd9fe60 100644
--- a/src/third_party/wiredtiger/test/format/config.c
+++ b/src/third_party/wiredtiger/test/format/config.c
@@ -31,6 +31,7 @@
static void config(void);
static void config_backup_incr(void);
+static void config_backup_incr_granularity(void);
static void config_backward_compatible(void);
static void config_cache(void);
static void config_checkpoint(void);
@@ -283,6 +284,8 @@ config_backup_incr(void)
if (g.c_logging_archive)
config_single("logging.archive=0", false);
}
+ if (g.c_backup_incr_flag == INCREMENTAL_BLOCK)
+ config_backup_incr_granularity();
return;
}
@@ -311,11 +314,56 @@ config_backup_incr(void)
case 9:
case 10:
config_single("backup.incremental=block", false);
+ config_backup_incr_granularity();
break;
}
}
/*
+ * config_backup_incr_granularity --
+ * Configuration of block granularity for incremental backup
+ */
+static void
+config_backup_incr_granularity(void)
+{
+ uint32_t granularity, i;
+ char confbuf[128];
+
+ if (config_is_perm("backup.incr_granularity"))
+ return;
+
+ /*
+ * Three block sizes are interesting. 16MB is the default for WiredTiger and MongoDB. 1MB is the
+ * minimum allowed by MongoDB. Smaller sizes stress block tracking and are good for testing. The
+ * granularity is in units of KB.
+ */
+ granularity = 0;
+ i = mmrand(NULL, 1, 10);
+ switch (i) {
+ case 1: /* 50% small size for stress testing */
+ case 2:
+ case 3:
+ case 4:
+ case 5:
+ granularity = 4 * i;
+ break;
+ case 6: /* 20% 1MB granularity */
+ case 7:
+ granularity = 1024;
+ break;
+ case 8: /* 30% 16MB granularity */
+ case 9:
+ case 10:
+ granularity = 16 * 1024;
+ break;
+ }
+
+ testutil_check(
+ __wt_snprintf(confbuf, sizeof(confbuf), "backup.incr_granularity=%u", granularity));
+ config_single(confbuf, false);
+}
+
+/*
* config_backward_compatible --
* Backward compatibility configuration.
*/
diff --git a/src/third_party/wiredtiger/test/format/config.h b/src/third_party/wiredtiger/test/format/config.h
index 04da641386b..19e5c96e03f 100644
--- a/src/third_party/wiredtiger/test/format/config.h
+++ b/src/third_party/wiredtiger/test/format/config.h
@@ -74,6 +74,9 @@ static CONFIG c[] = {
{"backup.incremental", "type of backup (block | log | off)", C_IGNORE | C_STRING, 0, 0, 0, NULL,
&g.c_backup_incremental},
+ {"backup.incr_granularity", "incremental backup block granularity in KB", 0x0, 4, 16384, 16384,
+ &g.c_backup_incr_granularity, NULL},
+
{"btree.bitcnt", "number of bits for fixed-length column-store files", 0x0, 1, 8, 8, &g.c_bitcnt,
NULL},
diff --git a/src/third_party/wiredtiger/test/format/format.h b/src/third_party/wiredtiger/test/format/format.h
index 6bc213a65ef..5133f27c925 100644
--- a/src/third_party/wiredtiger/test/format/format.h
+++ b/src/third_party/wiredtiger/test/format/format.h
@@ -137,6 +137,7 @@ typedef struct {
uint32_t c_auto_throttle;
uint32_t c_backups;
char *c_backup_incremental;
+ uint32_t c_backup_incr_granularity;
uint32_t c_bitcnt;
uint32_t c_bloom;
uint32_t c_bloom_bit_count;